RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 MEDAGQ5VYS4 303 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 FOXB2Q5VYV0 432 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 GTF2IRD2BQ6EKJ0 949 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 ABLIM2Q6H8Q1 611 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 PLBD1Q6P4A8 553 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 PAQR6Q6TCH4 344 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 AHSA2Q719I0 299 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 GTF2IRD2Q86UP8 949 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 JAZF1Q86VZ6 243 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 CPOQ8IVL8 374 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 KDM8Q8N371 416 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 FAM109AQ8N4B1 249 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 ASB10Q8WXI3 467 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 MARVELD3Q96A59 401 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 LGALS12Q96DT0 336 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 SFXN2Q96NB2 322 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 NMNAT3Q96T66 252 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 ASPNQ9BXN1 380 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 PRRG3Q9BZD7 231 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 TXNIPQ9H3M7 391 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 INIPQ9NRY2 104 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 TAS2R16Q9NYV7 291 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 CNOT2Q9NZN8 540 aaKnown RBP9.29□□□□□ -0.92
TPM3-217ENST00000504663 KLHL21Q9UJP4 597 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 ING1Q9UK53 422 aaPredicted RBP9.29□□□□□ -0.92
TPM3-217ENST00000504663 B3GALT5Q9Y2C3 310 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 PCDHGB1Q9Y5G3 927 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 ALPK2Q86TB3 2170 aa9.29□□□□□ -0.92
TPM3-217ENST00000504663 ATMQ13315 3056 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 A0A087WXM4 84 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 ZNF716A6NP11 495 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 C11orf98E9PRG8 122 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 H7C1C5 153 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 DNPH1O43598 174 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 MRPS14O60783 128 aaKnown RBP9.28□□□□□ -0.92
TPM3-217ENST00000504663 STSP08842 583 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 PSKH1P11801 424 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 ATP6V1B1P15313 513 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 JUNBP17275 347 aaPredicted RBP9.28□□□□□ -0.92
TPM3-217ENST00000504663 HTR1FP30939 366 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 RPL4P36578 427 aaKnown RBP9.28□□□□□ -0.92
TPM3-217ENST00000504663 MAP2K4P45985 399 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 EIF1AXP47813 144 aaKnown RBP9.28□□□□□ -0.92
TPM3-217ENST00000504663 SLC25A1P53007 311 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 OR2B6P58173 313 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 RPL27P61353 136 aaKnown RBP9.28□□□□□ -0.92
TPM3-217ENST00000504663 LCN6P62502 163 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 CSNK2BP67870 215 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 GGTLC2Q14390 218 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 MELKQ14680 651 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 POU4F3Q15319 338 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 LINC00303Q3SY05 128 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 EMC4Q5J8M3 183 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 ALKBH2Q6NS38 261 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 BORAQ6PGQ7 559 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 LYPD4Q6UWN0 246 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 B3GLCTQ6Y288 498 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 ESPNLQ6ZVH7 1005 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 PRSS48Q7RTY5 328 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 PXKQ7Z7A4 578 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 ARIH2OSQ8N7S6 290 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 ZNF540Q8NDQ6 660 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 OR52E2Q8NGJ4 325 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 OR52I1Q8NGK6 324 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 OR9Q1Q8NGQ5 310 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 OR2V1Q8NHB1 315 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 FAR1Q8WVX9 515 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 IPCEF1Q8WWN9 437 aaPredicted RBP9.28□□□□□ -0.92
TPM3-217ENST00000504663 SMPDL3BQ92485 455 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 MUL1Q969V5 352 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 CRELD1Q96HD1 420 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 SNX18Q96RF0 628 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 TIMP4Q99727 224 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 COPS4Q9BT78 406 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 JAM3Q9BX67 310 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 RBM38Q9H0Z9 239 aaKnown RBP9.28□□□□□ -0.92
TPM3-217ENST00000504663 FGF20Q9NP95 211 aaPredicted RBP9.28□□□□□ -0.92
TPM3-217ENST00000504663 CLN6Q9NWW5 311 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 VSX1Q9NZR4 365 aaPredicted RBP9.28□□□□□ -0.92
TPM3-217ENST00000504663 B4GALT7Q9UBV7 327 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 SCOCQ9UIL1 159 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 EXOGQ9Y2C4 368 aaKnown RBP9.28□□□□□ -0.92
TPM3-217ENST00000504663 LSM2Q9Y333 95 aaKnown RBP9.28□□□□□ -0.92
TPM3-217ENST00000504663 TPRKBQ9Y3C4 175 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 ZZEF1O43149 2961 aa9.28□□□□□ -0.92
TPM3-217ENST00000504663 DNAJC13O75165 2243 aa9.27□□□□□ -0.93
TPM3-217ENST00000504663 IGHV3-15A0A0B4J1V0 119 aa9.27□□□□□ -0.93
TPM3-217ENST00000504663 IGKV1D-43A0A0B4J1Z2 117 aa9.27□□□□□ -0.93
TPM3-217ENST00000504663 A0A1B0GVC2 190 aa9.27□□□□□ -0.93
TPM3-217ENST00000504663 DPPA5A6NC42 116 aa9.27□□□□□ -0.93
TPM3-217ENST00000504663 RIIAD1A6NNX1 92 aa9.27□□□□□ -0.93
TPM3-217ENST00000504663 PTGES3LE9PB15 166 aa9.27□□□□□ -0.93
TPM3-217ENST00000504663 LINC01387J3KSC0 135 aa9.27□□□□□ -0.93
TPM3-217ENST00000504663 SULT2B1O00204 365 aa9.27□□□□□ -0.93
TPM3-217ENST00000504663 RNF13O43567 381 aa9.27□□□□□ -0.93
TPM3-217ENST00000504663 RGS10O43665 173 aa9.27□□□□□ -0.93
TPM3-217ENST00000504663 TRAPPC6AO75865 159 aa9.27□□□□□ -0.93
TPM3-217ENST00000504663 IGHA1P01876 353 aa9.27□□□□□ -0.93
TPM3-217ENST00000504663 TFP02787 698 aa9.27□□□□□ -0.93
TPM3-217ENST00000504663 HIST1H2ABP04908 130 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms