RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 PARP8Q8N3A8 854 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 CADM2Q8N3J6 435 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 LILRB2Q8N423 598 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 PAQR4Q8N4S7 273 aaPredicted RBP3.07□□□□□ -1.92
USP46-205ENST00000504078 ZIC4Q8N9L1 334 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 POMGNT2Q8NAT1 580 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 GLB1L3Q8NCI6 653 aaPredicted RBP3.07□□□□□ -1.92
USP46-205ENST00000504078 OR4F15Q8NGB8 312 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 AGR3Q8TD06 166 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 ADAMTS15Q8TE58 950 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 SLC25A43Q8WUT9 341 aaPredicted RBP3.07□□□□□ -1.92
USP46-205ENST00000504078 GEMIN6Q8WXD5 167 aaKnown RBP3.07□□□□□ -1.92
USP46-205ENST00000504078 ST8SIA1Q92185 356 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 CNOT9Q92600 299 aaKnown RBP3.07□□□□□ -1.92
USP46-205ENST00000504078 SLC25A28Q96A46 364 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 ANKRD27Q96NW4 1050 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 DCLRE1CQ96SD1 692 aaKnown RBP3.07□□□□□ -1.92
USP46-205ENST00000504078 PAFAH2Q99487 392 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 PRPF18Q99633 342 aaKnown RBP3.07□□□□□ -1.92
USP46-205ENST00000504078 CITED1Q99966 193 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 ARPC5LQ9BPX5 153 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 ZNF416Q9BWM5 594 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 ACTRT3Q9BYD9 372 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 CHIAQ9BZP6 476 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 MS4A7Q9GZW8 240 aaPredicted RBP3.07□□□□□ -1.92
USP46-205ENST00000504078 SLITRK2Q9H156 845 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 PIGUQ9H490 435 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 GSTO2Q9H4Y5 243 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 REEP4Q9H6H4 257 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 NTN4Q9HB63 628 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 ACER3Q9NUN7 267 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 AP5S1Q9NUS5 200 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 TMEM45AQ9NWC5 275 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 NINJ2Q9NZG7 142 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 C1RLQ9NZP8 487 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 TMEM216Q9P0N5 145 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 TAAR3PQ9P1P4 343 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 TMEM181Q9P2C4 612 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 CRNNQ9UBG3 495 aaPredicted RBP3.07□□□□□ -1.92
USP46-205ENST00000504078 LEF1Q9UJU2 399 aaPredicted RBP3.07□□□□□ -1.92
USP46-205ENST00000504078 OSGIN1Q9UJX0 560 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 NUP50Q9UKX7 468 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 GRID1Q9ULK0 1009 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 NFU1Q9UMS0 254 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 FAF1Q9UNN5 650 aaPredicted RBP3.07□□□□□ -1.92
USP46-205ENST00000504078 TMED7Q9Y3B3 224 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 NOX1Q9Y5S8 564 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 SPIN1Q9Y657 262 aaPredicted RBP3.07□□□□□ -1.92
USP46-205ENST00000504078 NBEAL2Q6ZNJ1 2754 aa3.07□□□□□ -1.92
USP46-205ENST00000504078 HEATR1Q9H583 2144 aaKnown RBP3.07□□□□□ -1.92
USP46-205ENST00000504078 IGHV1-69-2A0A0G2JMI3 117 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 IGHV3-64DA0A0J9YX35 117 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 ZSCAN5BA6NJL1 495 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 LIPT2A6NK58 231 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 AQP7P3A6NL99 342 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 TTC36A6NLP5 189 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 J3QLI3 93 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 TIMM23O14925 209 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 SCAMP2O15127 329 aaKnown RBP3.06□□□□□ -1.92
USP46-205ENST00000504078 EIF3HO15372 352 aaKnown RBP eCLIP3.06□□□□□ -1.92
USP46-205ENST00000504078 SPRY3O43610 288 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 EIF4E2O60573 245 aaKnown RBP3.06□□□□□ -1.92
USP46-205ENST00000504078 SLC43A1O75387 559 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 PF4P02776 101 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 GSNP06396 782 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 ENO1P06733 434 aaKnown RBP3.06□□□□□ -1.92
USP46-205ENST00000504078 CHRM4P08173 479 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 GSTA1P08263 222 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 GSTA2P09210 222 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 LINC00032P0C843 101 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 GKN3PP0CG01 181 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 OR12D1P0DN82 309 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 LAMP1P11279 417 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 CBR1P16152 277 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 PGM1P36871 562 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 HPCAL1P37235 193 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 GIPRP48546 466 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 CCT3P49368 545 aaKnown RBP3.06□□□□□ -1.92
USP46-205ENST00000504078 KHKP50053 298 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 POLR2HP52434 150 aaKnown RBP3.06□□□□□ -1.92
USP46-205ENST00000504078 AQP5P55064 265 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 SLC35A1P78382 337 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 GALK2Q01415 458 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 SLC7A5Q01650 507 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 PRB3Q04118 309 aaPredicted RBP3.06□□□□□ -1.92
USP46-205ENST00000504078 ZNF154Q13106 437 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 NAB1Q13506 487 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 PDE7AQ13946 482 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 MPP2Q14168 576 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 PTGR1Q14914 329 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 PDK3Q15120 406 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 SMN1Q16637 294 aaKnown RBP3.06□□□□□ -1.92
USP46-205ENST00000504078 DEFB112Q30KQ8 113 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 SLC9B1Q4ZJI4 515 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 TMEM154Q6P9G4 183 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 UGT2A3Q6UWM9 527 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 FRRS1Q6ZNA5 592 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 EIF3MQ7L2H7 374 aaKnown RBP3.06□□□□□ -1.92
USP46-205ENST00000504078 GRINAQ7Z429 371 aa3.06□□□□□ -1.92
USP46-205ENST00000504078 ABHD12BQ7Z5M8 362 aaPredicted RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms