RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 ZNF835Q9Y2P0 537 aa2.34□□□□□ -2.03
SUB1-204ENST00000504016 F11RQ9Y624 299 aaKnown RBP2.34□□□□□ -2.03
SUB1-204ENST00000504016 MROH7-TTC4A0A0A0MT08 1334 aa2.34□□□□□ -2.04
SUB1-204ENST00000504016 NFASCO94856 1347 aa2.34□□□□□ -2.04
SUB1-204ENST00000504016 IGLV11-55A0A075B6I3 123 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 BICDL2A1A5D9 508 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 ERVV-1B6SEH8 477 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 GMFGO60234 142 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 RETP07949 1114 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 CMA1P23946 247 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 FGL1Q08830 312 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 MOBPQ13875 183 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 KLHL38Q2WGJ6 581 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 SFT2D3Q587I9 215 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 FAM71E1Q6IPT2 247 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 DHDDSQ86SQ9 333 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 PCP2Q8IVA1 136 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 PIANPQ8IYJ0 282 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 TPRX1Q8N7U7 411 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 OR2L8Q8NGY9 312 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 MAGEE2Q8TD90 523 aaPredicted RBP2.33□□□□□ -2.04
SUB1-204ENST00000504016 ACTRT1Q8TDG2 376 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 SCFD1Q8WVM8 642 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 SMARCD2Q92925 531 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 EMG1Q92979 244 aaKnown RBP2.33□□□□□ -2.04
SUB1-204ENST00000504016 MS4A4EQ96PG1 132 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 NPAS2Q99743 824 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 ZSCAN5AQ9BUG6 496 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 RSPO3Q9BXY4 272 aaPredicted RBP2.33□□□□□ -2.04
SUB1-204ENST00000504016 LY9Q9HBG7 655 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 ADAP2Q9NPF8 381 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 LHX9Q9NQ69 397 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 TRIOBPQ9H2D6 2365 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 MSH6P52701 1360 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 PNPLA6Q8IY17 1366 aa2.33□□□□□ -2.04
SUB1-204ENST00000504016 SLIT3O75094 1523 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 PLAC8L1A1L4L8 177 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 H3BNH8 94 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 PEX7O00628 323 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 ANGPT2O15123 496 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 SLC31A2O15432 143 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 PRKAB2O43741 272 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 SCGNO76038 276 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 TLX1NBP0CAT3 122 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 RORAP35398 523 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 MAGEA8P43361 318 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 IFNAR2P48551 515 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 DUSP3P51452 185 aaPredicted RBP2.32□□□□□ -2.04
SUB1-204ENST00000504016 TNFRSF17Q02223 184 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 AQP6Q13520 282 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 STK11Q15831 433 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 CFAP157Q5JU67 520 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 PMF1Q6P1K2 205 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 GET4Q7L5D6 327 aaPredicted RBP2.32□□□□□ -2.04
SUB1-204ENST00000504016 FAM86B1Q8N7N1 296 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 PYROXD1Q8WU10 500 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 SDR42E1Q8WUS8 393 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 GEMIN6Q8WXD5 167 aaKnown RBP2.32□□□□□ -2.04
SUB1-204ENST00000504016 RLN3Q8WXF3 142 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 FGF14Q92915 247 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 SGK3Q96BR1 496 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 ZNF641Q96N77 438 aaPredicted RBP2.32□□□□□ -2.04
SUB1-204ENST00000504016 TSNARE1Q96NA8 513 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 RPRD1AQ96P16 312 aaPredicted RBP2.32□□□□□ -2.04
SUB1-204ENST00000504016 GABARAPL3Q9BY60 117 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 PPA2Q9H2U2 334 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 MCCC2Q9HCC0 563 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 XCL2Q9UBD3 114 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 CDH9Q9ULB4 789 aa2.32□□□□□ -2.04
SUB1-204ENST00000504016 ZNFX1Q9P2E3 1918 aaKnown RBP2.31□□□□□ -2.04
SUB1-204ENST00000504016 PPIAL4EA0A075B759 164 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 IGKV1D-13A0A0B4J2D9 117 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 TMEM150BA6NC51 233 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 H0YCG3 227 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 ZNF208O43345 1280 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 SNNO75324 88 aaPredicted RBP2.31□□□□□ -2.04
SUB1-204ENST00000504016 FOXH1O75593 365 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 CTDNEP1O95476 244 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 MRPL3P09001 348 aaKnown RBP2.31□□□□□ -2.04
SUB1-204ENST00000504016 PPIAL4FP0DN26 164 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 IGKV1-13P0DP09 117 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 PRPS2P11908 318 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 IGFBP3P17936 291 aaPredicted RBP2.31□□□□□ -2.04
SUB1-204ENST00000504016 TFPI2P48307 235 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 NCBP2P52298 156 aaKnown RBP eCLIP2.31□□□□□ -2.04
SUB1-204ENST00000504016 HMGCS1Q01581 520 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 SCRN3Q0VDG4 424 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 FILIP1LQ4L180 1135 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 Q6ZR03 302 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 NUDCD3Q8IVD9 361 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 GMCL1P1Q8NEA9 526 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 ZNF721Q8TF20 911 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 LRRC58Q96CX6 371 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 C10orf35Q96D05 121 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 AURKBQ96GD4 344 aaPredicted RBP2.31□□□□□ -2.04
SUB1-204ENST00000504016 MTMR9Q96QG7 549 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 FMO2Q99518 471 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 COPS8Q99627 209 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 RTBDNQ9BSG5 229 aaPredicted RBP2.31□□□□□ -2.04
SUB1-204ENST00000504016 SCRT1Q9BWW7 348 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms