RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 G6PC2Q9NQR9 355 aa12.6□□□□□ -0.39
TRAF4-212ENST00000498540 ZNF224Q9NZL3 707 aa12.6□□□□□ -0.39
TRAF4-212ENST00000498540 RAP2CQ9Y3L5 183 aa12.6□□□□□ -0.39
TRAF4-212ENST00000498540 AIM2O14862 343 aa12.59□□□□□ -0.39
TRAF4-212ENST00000498540 KRT75O95678 551 aa12.59□□□□□ -0.39
TRAF4-212ENST00000498540 HPRP00739 348 aa12.59□□□□□ -0.39
TRAF4-212ENST00000498540 B4GALT1P15291 398 aa12.59□□□□□ -0.39
TRAF4-212ENST00000498540 CBLP22681 906 aa12.59□□□□□ -0.39
TRAF4-212ENST00000498540 GRPRP30550 384 aa12.59□□□□□ -0.39
TRAF4-212ENST00000498540 PTDSS1P48651 473 aaKnown RBP12.59□□□□□ -0.39
TRAF4-212ENST00000498540 AQP5P55064 265 aa12.59□□□□□ -0.39
TRAF4-212ENST00000498540 TMEM33P57088 247 aa12.59□□□□□ -0.39
TRAF4-212ENST00000498540 LARS2Q15031 903 aaKnown RBP12.59□□□□□ -0.39
TRAF4-212ENST00000498540 TRMT5Q32P41 509 aaKnown RBP12.59□□□□□ -0.39
TRAF4-212ENST00000498540 ALKBH6Q3KRA9 238 aa12.59□□□□□ -0.39
TRAF4-212ENST00000498540 OGFOD2Q6N063 350 aa12.59□□□□□ -0.39
TRAF4-212ENST00000498540 ZNF813Q6ZN06 617 aa12.59□□□□□ -0.39
TRAF4-212ENST00000498540 TAAR8Q969N4 342 aa12.59□□□□□ -0.39
TRAF4-212ENST00000498540 TMEM19Q96HH6 336 aa12.59□□□□□ -0.39
TRAF4-212ENST00000498540 EMC6Q9BV81 110 aa12.59□□□□□ -0.39
TRAF4-212ENST00000498540 MEAF6Q9HAF1 191 aa12.59□□□□□ -0.39
TRAF4-212ENST00000498540 ESM1Q9NQ30 184 aa12.59□□□□□ -0.39
TRAF4-212ENST00000498540 AIG1Q9NVV5 245 aa12.59□□□□□ -0.39
TRAF4-212ENST00000498540 CALML5Q9NZT1 146 aa12.59□□□□□ -0.39
TRAF4-212ENST00000498540 NOX1Q9Y5S8 564 aa12.59□□□□□ -0.39
TRAF4-212ENST00000498540 RFXANKO14593 260 aa12.58□□□□□ -0.4
TRAF4-212ENST00000498540 AKAP8O43823 692 aaKnown RBP12.58□□□□□ -0.4
TRAF4-212ENST00000498540 TGP01266 2768 aa12.58□□□□□ -0.4
TRAF4-212ENST00000498540 HLA-DOBP13765 273 aa12.58□□□□□ -0.4
TRAF4-212ENST00000498540 ADRA2CP18825 462 aa12.58□□□□□ -0.4
TRAF4-212ENST00000498540 CRATP43155 626 aa12.58□□□□□ -0.4
TRAF4-212ENST00000498540 MAGEB1P43366 347 aa12.58□□□□□ -0.4
TRAF4-212ENST00000498540 LIMS1P48059 325 aa12.58□□□□□ -0.4
TRAF4-212ENST00000498540 GIPRP48546 466 aa12.58□□□□□ -0.4
TRAF4-212ENST00000498540 DSTNP60981 165 aa12.58□□□□□ -0.4
TRAF4-212ENST00000498540 MRPS11P82912 194 aaKnown RBP12.58□□□□□ -0.4
TRAF4-212ENST00000498540 MYBPC1Q00872 1141 aa12.58□□□□□ -0.4
TRAF4-212ENST00000498540 MFSD13AQ14CX5 517 aa12.58□□□□□ -0.4
TRAF4-212ENST00000498540 ZNF311Q5JNZ3 666 aa12.58□□□□□ -0.4
TRAF4-212ENST00000498540 FAM69AQ5T7M9 428 aa12.58□□□□□ -0.4
TRAF4-212ENST00000498540 GKAP1Q5VSY0 366 aaPredicted RBP12.58□□□□□ -0.4
TRAF4-212ENST00000498540 REP15Q6BDI9 236 aa12.58□□□□□ -0.4
TRAF4-212ENST00000498540 C6orf89Q6UWU4 347 aa12.58□□□□□ -0.4
TRAF4-212ENST00000498540 C20orf196Q8IYI0 205 aa12.58□□□□□ -0.4
TRAF4-212ENST00000498540 JMJD8Q96S16 334 aa12.58□□□□□ -0.4
TRAF4-212ENST00000498540 SLC6A7Q99884 636 aa12.58□□□□□ -0.4
TRAF4-212ENST00000498540 ZNF416Q9BWM5 594 aa12.58□□□□□ -0.4
TRAF4-212ENST00000498540 TMPRSS13Q9BYE2 586 aa12.58□□□□□ -0.4
TRAF4-212ENST00000498540 DUSP13Q9UII6 198 aa12.58□□□□□ -0.4
TRAF4-212ENST00000498540 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.58□□□□□ -0.4
TRAF4-212ENST00000498540 WNK2Q9Y3S1 2297 aa12.58□□□□□ -0.4
TRAF4-212ENST00000498540 IGKV1D-42A0A075B6H8 117 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 LOC102725191A0A1B0GVB3 256 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 A0A1W2PPW3 197 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 MS4A18H0YCH9 400 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 SLC1A6P48664 564 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 RPS23P62266 143 aaKnown RBP12.57□□□□□ -0.4
TRAF4-212ENST00000498540 GALK2Q01415 458 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 IFFO1Q0D2I5 559 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 LRRC74AQ0VAA2 488 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 MS4A18Q3C1V0 323 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 GTDC1Q4AE62 458 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 PRR31Q5SQ13 230 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 AVPI1Q5T686 147 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 H1FNTQ75WM6 255 aaPredicted RBP12.57□□□□□ -0.4
TRAF4-212ENST00000498540 ZNF627Q7L945 461 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 C1QL2Q7Z5L3 287 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 UEVLDQ8IX04 471 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 ZDHHC22Q8N966 263 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 SLC38A4Q969I6 547 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 VPS33AQ96AX1 596 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 SUCNR1Q9BXA5 334 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 ZNF385DQ9H6B1 395 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 ZNF665Q9H7R5 613 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 PNPOQ9NVS9 261 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 MED29Q9NX70 200 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 HAO1Q9UJM8 370 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 ZNF232Q9UNY5 417 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 PCDHGB1Q9Y5G3 927 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 GPR45Q9Y5Y3 372 aa12.57□□□□□ -0.4
TRAF4-212ENST00000498540 A0A0G2JPF8 293 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 HNRNPCL2B2RXH8 293 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 HNRNPCL3B7ZW38 293 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 SDHDO14521 159 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 TMPRSS2O15393 492 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 PLPP2O43688 288 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 OR2T1O43869 369 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 CDC14BO60729 498 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 HNRNPCL1O60812 293 aaKnown RBP12.56□□□□□ -0.4
TRAF4-212ENST00000498540 DEAF1O75398 565 aaPredicted RBP12.56□□□□□ -0.4
TRAF4-212ENST00000498540 MPZL1O95297 269 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 RAB36O95755 333 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 HNRNPCL4P0DMR1 293 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 HTR2AP28223 471 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 RAB1AP62820 205 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 MVKQ03426 396 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 RAB39AQ14964 217 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 GLIPR1L2Q4G1C9 344 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 ACSM5Q6NUN0 579 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 ZNF584Q8IVC4 421 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms