RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 KLHL24Q6TFL4 600 aa16.11■□□□□ 0.17
PRKCB-209ENST00000498058 SLC30A8Q8IWU4 369 aa16.11■□□□□ 0.17
PRKCB-209ENST00000498058 SLC15A3Q8IY34 581 aa16.11■□□□□ 0.17
PRKCB-209ENST00000498058 MAL2Q969L2 176 aa16.11■□□□□ 0.17
PRKCB-209ENST00000498058 ZNF837Q96EG3 531 aaPredicted RBP16.11■□□□□ 0.17
PRKCB-209ENST00000498058 KTI12Q96EK9 354 aaPredicted RBP16.11■□□□□ 0.17
PRKCB-209ENST00000498058 PRR14Q9BWN1 585 aa16.11■□□□□ 0.17
PRKCB-209ENST00000498058 B3GAT1Q9P2W7 334 aa16.11■□□□□ 0.17
PRKCB-209ENST00000498058 CRNNQ9UBG3 495 aaPredicted RBP16.11■□□□□ 0.17
PRKCB-209ENST00000498058 ABCD2Q9UBJ2 740 aa16.11■□□□□ 0.17
PRKCB-209ENST00000498058 CDC42EP3Q9UKI2 254 aa16.11■□□□□ 0.17
PRKCB-209ENST00000498058 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.1■□□□□ 0.17
PRKCB-209ENST00000498058 ARPC4-TTLL3A0A0A6YYG9 625 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 A0A0G2JPF8 293 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 HNRNPCL2B2RXH8 293 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 HNRNPCL3B7ZW38 293 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 C5orf58C9J3I9 102 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 ZNF587BE7ETH6 402 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 ZNF432O94892 652 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 IGLV1-44P01699 117 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 HNRNPCL4P0DMR1 293 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 IGFBP5P24593 272 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 RPS5P46782 204 aaKnown RBP16.1■□□□□ 0.17
PRKCB-209ENST00000498058 COPZ1P61923 177 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 NAAAQ02083 359 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 HGFACQ04756 655 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 SELPLGQ14242 412 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 GGTLC2Q14390 218 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 C1QTNF12Q5T7M4 302 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 IL17RELQ6ZVW7 336 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 C10orf111Q8N326 155 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 C11orf65Q8NCR3 313 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 OR10A6Q8NH74 314 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 MFSD8Q8NHS3 518 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 STK35Q8TDR2 534 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 SLC25A36Q96CQ1 311 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 FOXN4Q96NZ1 517 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 CDRT15Q96T59 188 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 IKZF5Q9H5V7 419 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 TMEM38AQ9H6F2 299 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 A4GALTQ9NPC4 353 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 OBP2BQ9NPH6 170 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 CA10Q9NS85 328 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 CMTM6Q9NX76 183 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 RASD1Q9Y272 281 aa16.1■□□□□ 0.17
PRKCB-209ENST00000498058 IGHV4-61A0A0C4DH41 118 aa16.09■□□□□ 0.17
PRKCB-209ENST00000498058 FAM220BPB1ANY3 271 aa16.09■□□□□ 0.17
PRKCB-209ENST00000498058 RRP9O43818 475 aaKnown RBP16.09■□□□□ 0.17
PRKCB-209ENST00000498058 FZD7O75084 574 aa16.09■□□□□ 0.17
PRKCB-209ENST00000498058 KRT33AO76009 404 aa16.09■□□□□ 0.17
PRKCB-209ENST00000498058 VAMP5O95183 116 aa16.09■□□□□ 0.17
PRKCB-209ENST00000498058 CSF3P09919 207 aa16.09■□□□□ 0.17
PRKCB-209ENST00000498058 SERPINF1P36955 418 aa16.09■□□□□ 0.17
PRKCB-209ENST00000498058 NR4A2P43354 598 aa16.09■□□□□ 0.17
PRKCB-209ENST00000498058 PDLIM4P50479 330 aa16.09■□□□□ 0.17
PRKCB-209ENST00000498058 CLDN17P56750 224 aa16.09■□□□□ 0.17
PRKCB-209ENST00000498058 ROR2Q01974 943 aaKnown RBP16.09■□□□□ 0.17
PRKCB-209ENST00000498058 LIPEQ05469 1076 aa16.09■□□□□ 0.17
PRKCB-209ENST00000498058 LARS2Q15031 903 aaKnown RBP16.09■□□□□ 0.17
PRKCB-209ENST00000498058 KRTAP24-1Q3LI83 254 aa16.09■□□□□ 0.17
PRKCB-209ENST00000498058 ZNF311Q5JNZ3 666 aa16.09■□□□□ 0.17
PRKCB-209ENST00000498058 VHLLQ6RSH7 139 aa16.09■□□□□ 0.17
PRKCB-209ENST00000498058 ABHD12BQ7Z5M8 362 aaPredicted RBP16.09■□□□□ 0.17
PRKCB-209ENST00000498058 NET1Q7Z628 596 aaPredicted RBP16.09■□□□□ 0.17
PRKCB-209ENST00000498058 OR2T12Q8NG77 320 aa16.09■□□□□ 0.17
PRKCB-209ENST00000498058 MAGEE2Q8TD90 523 aaPredicted RBP16.09■□□□□ 0.17
PRKCB-209ENST00000498058 MCUR1Q96AQ8 359 aa16.09■□□□□ 0.17
PRKCB-209ENST00000498058 SLC7A6OSQ96CW6 309 aaPredicted RBP16.09■□□□□ 0.17
PRKCB-209ENST00000498058 KCTD14Q9BQ13 255 aaPredicted RBP16.09■□□□□ 0.17
PRKCB-209ENST00000498058 SOX7Q9BT81 388 aa16.09■□□□□ 0.17
PRKCB-209ENST00000498058 KATNB1Q9BVA0 655 aa16.09■□□□□ 0.17
PRKCB-209ENST00000498058 BEX2Q9BXY8 128 aa16.09■□□□□ 0.17
PRKCB-209ENST00000498058 LINC00470Q9BZP3 86 aa16.09■□□□□ 0.17
PRKCB-209ENST00000498058 LRMDAQ9H2I8 198 aa16.09■□□□□ 0.17
PRKCB-209ENST00000498058 CACYBPQ9HB71 228 aaKnown RBP16.09■□□□□ 0.17
PRKCB-209ENST00000498058 PRDM4Q9UKN5 801 aa16.09■□□□□ 0.17
PRKCB-209ENST00000498058 IGKV1D-42A0A075B6H8 117 aa16.08■□□□□ 0.16
PRKCB-209ENST00000498058 NME4O00746 187 aa16.08■□□□□ 0.16
PRKCB-209ENST00000498058 LMX1BO60663 402 aa16.08■□□□□ 0.16
PRKCB-209ENST00000498058 GMNNO75496 209 aa16.08■□□□□ 0.16
PRKCB-209ENST00000498058 DNAJC8O75937 253 aaPredicted RBP16.08■□□□□ 0.16
PRKCB-209ENST00000498058 AHSA1O95433 338 aa16.08■□□□□ 0.16
PRKCB-209ENST00000498058 IGFBP1P08833 259 aaPredicted RBP16.08■□□□□ 0.16
PRKCB-209ENST00000498058 BMP4P12644 408 aa16.08■□□□□ 0.16
PRKCB-209ENST00000498058 HTR2AP28223 471 aa16.08■□□□□ 0.16
PRKCB-209ENST00000498058 ARF1P84077 181 aaKnown RBP16.08■□□□□ 0.16
PRKCB-209ENST00000498058 PHYHD1Q5SRE7 291 aa16.08■□□□□ 0.16
PRKCB-209ENST00000498058 INTS11Q5TA45 600 aaKnown RBP16.08■□□□□ 0.16
PRKCB-209ENST00000498058 CALHM3Q86XJ0 350 aa16.08■□□□□ 0.16
PRKCB-209ENST00000498058 WDFY1Q8IWB7 410 aa16.08■□□□□ 0.16
PRKCB-209ENST00000498058 TMEM158Q8WZ71 300 aa16.08■□□□□ 0.16
PRKCB-209ENST00000498058 MSI2Q96DH6 328 aaKnown RBP16.08■□□□□ 0.16
PRKCB-209ENST00000498058 VRK1Q99986 396 aaPredicted RBP16.08■□□□□ 0.16
PRKCB-209ENST00000498058 MMADHCQ9H3L0 296 aaPredicted RBP16.08■□□□□ 0.16
PRKCB-209ENST00000498058 PLK3Q9H4B4 646 aa16.08■□□□□ 0.16
PRKCB-209ENST00000498058 BCL2L10Q9HD36 194 aa16.08■□□□□ 0.16
PRKCB-209ENST00000498058 ANGPT4Q9Y264 503 aa16.08■□□□□ 0.16
PRKCB-209ENST00000498058 GSTA4O15217 222 aa16.07■□□□□ 0.16
PRKCB-209ENST00000498058 IGKV3-15P01624 115 aa16.07■□□□□ 0.16
PRKCB-209ENST00000498058 CRYAAP02489 173 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms