RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 NXNL2Q5VZ03 156 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 PAQR6Q6TCH4 344 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 ESPNLQ6ZVH7 1005 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 PXKQ7Z7A4 578 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 IGFN1Q86VF2 1251 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 ANKK1Q8NFD2 765 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 TSPAN14Q8NG11 270 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 ADGRG7Q96K78 797 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 LRR1Q96L50 414 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 ZNF582Q96NG8 517 aaPredicted RBP12.7□□□□□ -0.38
VPS26A-209ENST00000497564 SNX18Q96RF0 628 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 DDOQ99489 341 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 MRPS26Q9BYN8 205 aaKnown RBP12.7□□□□□ -0.38
VPS26A-209ENST00000497564 TXNIPQ9H3M7 391 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 CCNB1IP1Q9NPC3 277 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 HINT3Q9NQE9 182 aaKnown RBP12.7□□□□□ -0.38
VPS26A-209ENST00000497564 CNOT2Q9NZN8 540 aaKnown RBP12.7□□□□□ -0.38
VPS26A-209ENST00000497564 DNAJC27Q9NZQ0 273 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 PSORS1C1Q9UIG5 152 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 ADAM18Q9Y3Q7 739 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 SPTBN1Q01082 2364 aaKnown RBP12.7□□□□□ -0.38
VPS26A-209ENST00000497564 GTF3C1Q12789 2109 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 POLEQ07864 2286 aa12.69□□□□□ -0.38
VPS26A-209ENST00000497564 A0A087WXM4 84 aa12.69□□□□□ -0.38
VPS26A-209ENST00000497564 AQP7P3A6NL99 342 aa12.69□□□□□ -0.38
VPS26A-209ENST00000497564 SNTNA6NMZ2 147 aa12.69□□□□□ -0.38
VPS26A-209ENST00000497564 CLCA1A8K7I4 914 aa12.69□□□□□ -0.38
VPS26A-209ENST00000497564 RNF13O43567 381 aa12.69□□□□□ -0.38
VPS26A-209ENST00000497564 SMNDC1O75940 238 aaKnown RBP eCLIP12.69□□□□□ -0.38
VPS26A-209ENST00000497564 AKR7A3O95154 331 aa12.69□□□□□ -0.38
VPS26A-209ENST00000497564 SLC2A10O95528 541 aa12.69□□□□□ -0.38
VPS26A-209ENST00000497564 ACTL6AO96019 429 aa12.69□□□□□ -0.38
VPS26A-209ENST00000497564 F13BP05160 661 aa12.69□□□□□ -0.38
VPS26A-209ENST00000497564 CELA3AP09093 270 aa12.69□□□□□ -0.38
VPS26A-209ENST00000497564 PIPP12273 146 aaPredicted RBP12.69□□□□□ -0.38
VPS26A-209ENST00000497564 HIST1H1CP16403 213 aaKnown RBP12.69□□□□□ -0.38
VPS26A-209ENST00000497564 POU3F2P20265 443 aaPredicted RBP12.69□□□□□ -0.38
VPS26A-209ENST00000497564 NOS3P29474 1203 aa12.69□□□□□ -0.38
VPS26A-209ENST00000497564 LHX2P50458 406 aa12.69□□□□□ -0.38
VPS26A-209ENST00000497564 AGFG1P52594 562 aaKnown RBP12.69□□□□□ -0.38
VPS26A-209ENST00000497564 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.69□□□□□ -0.38
VPS26A-209ENST00000497564 ITGADQ13349 1161 aa12.69□□□□□ -0.38
VPS26A-209ENST00000497564 TMED1Q13445 227 aa12.69□□□□□ -0.38
VPS26A-209ENST00000497564 BLMHQ13867 455 aa12.69□□□□□ -0.38
VPS26A-209ENST00000497564 SLC35F1Q5T1Q4 408 aa12.69□□□□□ -0.38
VPS26A-209ENST00000497564 RPUSD3Q6P087 351 aaKnown RBP12.69□□□□□ -0.38
VPS26A-209ENST00000497564 ZNF773Q6PK81 442 aa12.69□□□□□ -0.38
VPS26A-209ENST00000497564 CXXC5Q7LFL8 322 aaKnown RBP12.69□□□□□ -0.38
VPS26A-209ENST00000497564 GID4Q8IVV7 300 aa12.69□□□□□ -0.38
VPS26A-209ENST00000497564 GALNT11Q8NCW6 608 aa12.69□□□□□ -0.38
VPS26A-209ENST00000497564 RFKQ969G6 155 aa12.69□□□□□ -0.38
VPS26A-209ENST00000497564 DNAJA3Q96EY1 480 aa12.69□□□□□ -0.38
VPS26A-209ENST00000497564 TSPAN32Q96QS1 320 aa12.69□□□□□ -0.38
VPS26A-209ENST00000497564 SIGLEC11Q96RL6 698 aa12.69□□□□□ -0.38
VPS26A-209ENST00000497564 MRPS18AQ9NVS2 196 aaKnown RBP12.69□□□□□ -0.38
VPS26A-209ENST00000497564 PAK1IP1Q9NWT1 392 aaPredicted RBP12.69□□□□□ -0.38
VPS26A-209ENST00000497564 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.69□□□□□ -0.38
VPS26A-209ENST00000497564 GPR52Q9Y2T5 361 aa12.69□□□□□ -0.38
VPS26A-209ENST00000497564 RPL36Q9Y3U8 105 aaKnown RBP12.69□□□□□ -0.38
VPS26A-209ENST00000497564 CLEC18AA5D8T8 446 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 EFCAB10A6NFE3 127 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 PRR23D1E9PI22 279 aaPredicted RBP12.68□□□□□ -0.38
VPS26A-209ENST00000497564 VAMP5O95183 116 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 IGHG3P01860 377 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 OPN1LWP04000 364 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 PRR23D2P0DMB1 279 aaPredicted RBP12.68□□□□□ -0.38
VPS26A-209ENST00000497564 PAICSP22234 425 aaKnown RBP12.68□□□□□ -0.38
VPS26A-209ENST00000497564 CLDN20P56880 219 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 RAC3P60763 192 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 RPL27P61353 136 aaKnown RBP12.68□□□□□ -0.38
VPS26A-209ENST00000497564 KRR1Q13601 381 aaKnown RBP12.68□□□□□ -0.38
VPS26A-209ENST00000497564 CRMP1Q14194 572 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 POU4F3Q15319 338 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 INAQ16352 499 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 RNFT1Q5M7Z0 435 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 FAM205BPQ63HN1 556 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 TMEM154Q6P9G4 183 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 CLEC18BQ6UXF7 455 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 NHLRC1Q6VVB1 395 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 TRILQ7L0X0 811 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 ADCK1Q86TW2 530 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 ATCAYQ86WG3 371 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 CPOQ8IVL8 374 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 ARIH2OSQ8N7S6 290 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 TMEM99Q8N816 258 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 SLC37A3Q8NCC5 494 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 CLEC18CQ8NCF0 446 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 NPEPL1Q8NDH3 523 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 ZNF540Q8NDQ6 660 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 OR52E2Q8NGJ4 325 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 OR2V1Q8NHB1 315 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 NEIL3Q8TAT5 605 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 ZNF519Q8TB69 540 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 SMPDL3BQ92485 455 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 GGHQ92820 318 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 RASD2Q96D21 266 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 ZHX1-C8orf76Q96EF9 292 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 Q96M85 177 aa12.68□□□□□ -0.38
VPS26A-209ENST00000497564 NAA11Q9BSU3 229 aaPredicted RBP12.68□□□□□ -0.38
VPS26A-209ENST00000497564 NMNAT2Q9BZQ4 307 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms