RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 C10orf53Q8N6V4 93 aa13.72□□□□□ -0.21
HDAC4-213ENST00000496347 VANGL1Q8TAA9 524 aaPredicted RBP13.72□□□□□ -0.21
HDAC4-213ENST00000496347 PROX1Q92786 737 aa13.72□□□□□ -0.21
HDAC4-213ENST00000496347 ECSITQ9BQ95 431 aa13.72□□□□□ -0.21
HDAC4-213ENST00000496347 CACNG6Q9BXT2 260 aa13.72□□□□□ -0.21
HDAC4-213ENST00000496347 POLR2J2Q9GZM3 115 aaKnown RBP13.72□□□□□ -0.21
HDAC4-213ENST00000496347 POLR2J3Q9H1A7 115 aaKnown RBP13.72□□□□□ -0.21
HDAC4-213ENST00000496347 CRLF2Q9HC73 371 aa13.72□□□□□ -0.21
HDAC4-213ENST00000496347 GID8Q9NWU2 228 aa13.72□□□□□ -0.21
HDAC4-213ENST00000496347 BAG5Q9UL15 447 aa13.72□□□□□ -0.21
HDAC4-213ENST00000496347 ATP23Q9Y6H3 246 aa13.72□□□□□ -0.21
HDAC4-213ENST00000496347 IGHV1-18A0A0C4DH31 117 aa13.71□□□□□ -0.21
HDAC4-213ENST00000496347 ZNF99A8MXY4 864 aaPredicted RBP13.71□□□□□ -0.21
HDAC4-213ENST00000496347 FAM220BPB1ANY3 271 aa13.71□□□□□ -0.21
HDAC4-213ENST00000496347 LY6G6DO95868 133 aa13.71□□□□□ -0.21
HDAC4-213ENST00000496347 IFNA14P01570 189 aa13.71□□□□□ -0.21
HDAC4-213ENST00000496347 IGKV3-15P01624 115 aa13.71□□□□□ -0.21
HDAC4-213ENST00000496347 CBLP22681 906 aa13.71□□□□□ -0.21
HDAC4-213ENST00000496347 TNK1Q13470 666 aa13.71□□□□□ -0.21
HDAC4-213ENST00000496347 ZNF74Q16587 644 aa13.71□□□□□ -0.21
HDAC4-213ENST00000496347 WDR88Q6ZMY6 472 aa13.71□□□□□ -0.21
HDAC4-213ENST00000496347 ARPINQ7Z6K5 226 aa13.71□□□□□ -0.21
HDAC4-213ENST00000496347 C20orf196Q8IYI0 205 aa13.71□□□□□ -0.21
HDAC4-213ENST00000496347 OR5J2Q8NH18 312 aa13.71□□□□□ -0.21
HDAC4-213ENST00000496347 LRR1Q96L50 414 aa13.71□□□□□ -0.21
HDAC4-213ENST00000496347 GPR35Q9HC97 309 aa13.71□□□□□ -0.21
HDAC4-213ENST00000496347 B3GAT2Q9NPZ5 323 aa13.71□□□□□ -0.21
HDAC4-213ENST00000496347 SLC7A7Q9UM01 511 aa13.71□□□□□ -0.21
HDAC4-213ENST00000496347 A0A096LPE4 126 aa13.7□□□□□ -0.22
HDAC4-213ENST00000496347 A0A1W2PPZ6 126 aa13.7□□□□□ -0.22
HDAC4-213ENST00000496347 MS4A18H0YCH9 400 aa13.7□□□□□ -0.22
HDAC4-213ENST00000496347 PLPP3O14495 311 aa13.7□□□□□ -0.22
HDAC4-213ENST00000496347 PDE5AO76074 875 aa13.7□□□□□ -0.22
HDAC4-213ENST00000496347 LYPD3O95274 346 aa13.7□□□□□ -0.22
HDAC4-213ENST00000496347 CRYAAP02489 173 aa13.7□□□□□ -0.22
HDAC4-213ENST00000496347 CECR9P0C854 216 aa13.7□□□□□ -0.22
HDAC4-213ENST00000496347 HLA-DOBP13765 273 aa13.7□□□□□ -0.22
HDAC4-213ENST00000496347 PTNP21246 168 aa13.7□□□□□ -0.22
HDAC4-213ENST00000496347 ACVR1BP36896 505 aa13.7□□□□□ -0.22
HDAC4-213ENST00000496347 NUDT6P53370 316 aa13.7□□□□□ -0.22
HDAC4-213ENST00000496347 ARF1P84077 181 aaKnown RBP13.7□□□□□ -0.22
HDAC4-213ENST00000496347 CEACAM16Q2WEN9 425 aa13.7□□□□□ -0.22
HDAC4-213ENST00000496347 MS4A18Q3C1V0 323 aa13.7□□□□□ -0.22
HDAC4-213ENST00000496347 TTC33Q6PID6 262 aaPredicted RBP13.7□□□□□ -0.22
HDAC4-213ENST00000496347 Q71RC1 249 aaPredicted RBP13.7□□□□□ -0.22
HDAC4-213ENST00000496347 OR4D11Q8NGI4 311 aa13.7□□□□□ -0.22
HDAC4-213ENST00000496347 C10orf82Q8WW14 230 aa13.7□□□□□ -0.22
HDAC4-213ENST00000496347 ZNF229Q9UJW7 825 aa13.7□□□□□ -0.22
HDAC4-213ENST00000496347 MOKQ9UQ07 419 aa13.7□□□□□ -0.22
HDAC4-213ENST00000496347 AP3M1Q9Y2T2 418 aa13.7□□□□□ -0.22
HDAC4-213ENST00000496347 THY1P04216 161 aa13.69□□□□□ -0.22
HDAC4-213ENST00000496347 AHCYP23526 432 aa13.69□□□□□ -0.22
HDAC4-213ENST00000496347 APOBEC3AP31941 199 aaPredicted RBP13.69□□□□□ -0.22
HDAC4-213ENST00000496347 RBM34P42696 430 aaKnown RBP13.69□□□□□ -0.22
HDAC4-213ENST00000496347 DSCR9P59020 149 aa13.69□□□□□ -0.22
HDAC4-213ENST00000496347 NAAAQ02083 359 aa13.69□□□□□ -0.22
HDAC4-213ENST00000496347 CHRNB3Q05901 458 aa13.69□□□□□ -0.22
HDAC4-213ENST00000496347 ZNF627Q7L945 461 aa13.69□□□□□ -0.22
HDAC4-213ENST00000496347 TSPYL5Q86VY4 417 aaPredicted RBP13.69□□□□□ -0.22
HDAC4-213ENST00000496347 CARM1Q86X55 608 aa13.69□□□□□ -0.22
HDAC4-213ENST00000496347 RBM45Q8IUH3 476 aaKnown RBP13.69□□□□□ -0.22
HDAC4-213ENST00000496347 OR2T12Q8NG77 320 aa13.69□□□□□ -0.22
HDAC4-213ENST00000496347 ULBP2Q9BZM5 246 aa13.69□□□□□ -0.22
HDAC4-213ENST00000496347 NANSQ9NR45 359 aa13.69□□□□□ -0.22
HDAC4-213ENST00000496347 MED29Q9NX70 200 aa13.69□□□□□ -0.22
HDAC4-213ENST00000496347 GDF2Q9UK05 429 aaPredicted RBP13.69□□□□□ -0.22
HDAC4-213ENST00000496347 USP22Q9UPT9 525 aa13.69□□□□□ -0.22
HDAC4-213ENST00000496347 SLC35F4A4IF30 521 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 RNF223E7ERA6 249 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 LRRN3E7EW58 273 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 M0R3G1 203 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 NDUFS7O75251 213 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 OR5F1O95221 314 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 OR6A2O95222 327 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 IGF2P01344 180 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 CSF3P09919 207 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 ADORA3P0DMS8 318 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 ARR3P36575 388 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 MDH1P40925 334 aaKnown RBP13.68□□□□□ -0.22
HDAC4-213ENST00000496347 TAS2R41P59536 307 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 SNRPD2P62316 118 aaKnown RBP13.68□□□□□ -0.22
HDAC4-213ENST00000496347 TUBA1BP68363 451 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 TUBA4AP68366 448 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 CARD17Q5XLA6 110 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 CLEC2AQ6UVW9 174 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 NHLRC1Q6VVB1 395 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 TUBA1AQ71U36 451 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 NUP37Q8NFH4 326 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 OR4F15Q8NGB8 312 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 NANOS1Q8WY41 292 aaKnown RBP13.68□□□□□ -0.22
HDAC4-213ENST00000496347 RCN3Q96D15 328 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 ZNF583Q96ND8 569 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 REG4Q9BYZ8 158 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 CA10Q9NS85 328 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 ARMCX1Q9P291 453 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 SH3GLB1Q9Y371 365 aa13.68□□□□□ -0.22
HDAC4-213ENST00000496347 ATRQ13535 2644 aa13.67□□□□□ -0.22
HDAC4-213ENST00000496347 ZNF726A6NNF4 738 aa13.67□□□□□ -0.22
HDAC4-213ENST00000496347 KPNA4O00629 521 aaPredicted RBP13.67□□□□□ -0.22
HDAC4-213ENST00000496347 ENTPD5O75356 428 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms