RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 ARRDC5A6NEK1 342 aa15.14■□□□□ 0.01
HDAC6-235ENST00000495515 CYSRT1A8MQ03 144 aa15.14■□□□□ 0.01
HDAC6-235ENST00000495515 MCIDASD6RGH6 385 aa15.14■□□□□ 0.01
HDAC6-235ENST00000495515 CDC42EP2O14613 210 aa15.14■□□□□ 0.01
HDAC6-235ENST00000495515 BCL10O95999 233 aa15.14■□□□□ 0.01
HDAC6-235ENST00000495515 HLA-DOBP13765 273 aa15.14■□□□□ 0.01
HDAC6-235ENST00000495515 IFNGR1P15260 489 aa15.14■□□□□ 0.01
HDAC6-235ENST00000495515 DAP3P51398 398 aaKnown RBP15.14■□□□□ 0.01
HDAC6-235ENST00000495515 PPP1R8Q12972 351 aaKnown RBP15.14■□□□□ 0.01
HDAC6-235ENST00000495515 TSPAN31Q12999 210 aa15.14■□□□□ 0.01
HDAC6-235ENST00000495515 LAPTM4AQ15012 233 aa15.14■□□□□ 0.01
HDAC6-235ENST00000495515 ATP6AP1Q15904 470 aa15.14■□□□□ 0.01
HDAC6-235ENST00000495515 PGBD2Q6P3X8 592 aa15.14■□□□□ 0.01
HDAC6-235ENST00000495515 Q6ZT83 130 aa15.14■□□□□ 0.01
HDAC6-235ENST00000495515 OR10G2Q8NGC3 310 aa15.14■□□□□ 0.01
HDAC6-235ENST00000495515 MOSPD2Q8NHP6 518 aa15.14■□□□□ 0.01
HDAC6-235ENST00000495515 SLCO5A1Q9H2Y9 848 aa15.14■□□□□ 0.01
HDAC6-235ENST00000495515 SLC24A3Q9HC58 644 aa15.14■□□□□ 0.01
HDAC6-235ENST00000495515 ASB6Q9NWX5 421 aa15.14■□□□□ 0.01
HDAC6-235ENST00000495515 VNN3Q9NY84 501 aa15.14■□□□□ 0.01
HDAC6-235ENST00000495515 MGAT4BQ9UQ53 548 aa15.14■□□□□ 0.01
HDAC6-235ENST00000495515 ERICH4A6NGS2 130 aa15.13■□□□□ 0.01
HDAC6-235ENST00000495515 NPIPB13A6NJU9 1138 aa15.13■□□□□ 0.01
HDAC6-235ENST00000495515 NPIPB4C9JG80 1138 aa15.13■□□□□ 0.01
HDAC6-235ENST00000495515 KLF4O43474 513 aa15.13■□□□□ 0.01
HDAC6-235ENST00000495515 NDUFB2O95178 105 aa15.13■□□□□ 0.01
HDAC6-235ENST00000495515 CLDN1O95832 211 aa15.13■□□□□ 0.01
HDAC6-235ENST00000495515 F13BP05160 661 aa15.13■□□□□ 0.01
HDAC6-235ENST00000495515 GSTM3P21266 225 aa15.13■□□□□ 0.01
HDAC6-235ENST00000495515 NTF4P34130 210 aa15.13■□□□□ 0.01
HDAC6-235ENST00000495515 RPL4P36578 427 aaKnown RBP15.13■□□□□ 0.01
HDAC6-235ENST00000495515 GSSP48637 474 aa15.13■□□□□ 0.01
HDAC6-235ENST00000495515 SELENOPP49908 381 aa15.13■□□□□ 0.01
HDAC6-235ENST00000495515 SORDQ00796 357 aa15.13■□□□□ 0.01
HDAC6-235ENST00000495515 RPL13AP3Q6NVV1 102 aa15.13■□□□□ 0.01
HDAC6-235ENST00000495515 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.13■□□□□ 0.01
HDAC6-235ENST00000495515 AQP11Q8NBQ7 271 aa15.13■□□□□ 0.01
HDAC6-235ENST00000495515 OR9Q2Q8NGE9 314 aa15.13■□□□□ 0.01
HDAC6-235ENST00000495515 OR6X1Q8NH79 312 aa15.13■□□□□ 0.01
HDAC6-235ENST00000495515 PYDC1Q8WXC3 89 aa15.13■□□□□ 0.01
HDAC6-235ENST00000495515 NRBF2Q96F24 287 aa15.13■□□□□ 0.01
HDAC6-235ENST00000495515 HDHD5Q9BXW7 423 aa15.13■□□□□ 0.01
HDAC6-235ENST00000495515 B3GAT2Q9NPZ5 323 aa15.13■□□□□ 0.01
HDAC6-235ENST00000495515 MED29Q9NX70 200 aa15.13■□□□□ 0.01
HDAC6-235ENST00000495515 PDP1Q9P0J1 537 aaPredicted RBP15.13■□□□□ 0.01
HDAC6-235ENST00000495515 MALT1Q9UDY8 824 aa15.13■□□□□ 0.01
HDAC6-235ENST00000495515 PRSS50Q9UI38 385 aa15.13■□□□□ 0.01
HDAC6-235ENST00000495515 SIGLEC7Q9Y286 467 aa15.13■□□□□ 0.01
HDAC6-235ENST00000495515 SLC35F4A4IF30 521 aa15.12■□□□□ 0.01
HDAC6-235ENST00000495515 C16orf97H3BN30 126 aa15.12■□□□□ 0.01
HDAC6-235ENST00000495515 PTP4A3O75365 173 aa15.12■□□□□ 0.01
HDAC6-235ENST00000495515 ZNF432O94892 652 aa15.12■□□□□ 0.01
HDAC6-235ENST00000495515 IGHV3-9P01782 118 aa15.12■□□□□ 0.01
HDAC6-235ENST00000495515 BIDP55957 195 aa15.12■□□□□ 0.01
HDAC6-235ENST00000495515 CTXN1P60606 82 aa15.12■□□□□ 0.01
HDAC6-235ENST00000495515 ITGADQ13349 1161 aa15.12■□□□□ 0.01
HDAC6-235ENST00000495515 TSPO2Q5TGU0 170 aa15.12■□□□□ 0.01
HDAC6-235ENST00000495515 FAM205BPQ63HN1 556 aa15.12■□□□□ 0.01
HDAC6-235ENST00000495515 ZNF770Q6IQ21 691 aaPredicted RBP15.12■□□□□ 0.01
HDAC6-235ENST00000495515 SHQ1Q6PI26 577 aaKnown RBP15.12■□□□□ 0.01
HDAC6-235ENST00000495515 SMARCD3Q6STE5 483 aa15.12■□□□□ 0.01
HDAC6-235ENST00000495515 NHLRC1Q6VVB1 395 aa15.12■□□□□ 0.01
HDAC6-235ENST00000495515 GABRG1Q8N1C3 465 aa15.12■□□□□ 0.01
HDAC6-235ENST00000495515 GPR137CQ8N3F9 429 aa15.12■□□□□ 0.01
HDAC6-235ENST00000495515 STMN2Q93045 179 aa15.12■□□□□ 0.01
HDAC6-235ENST00000495515 TXNDC15Q96J42 360 aa15.12■□□□□ 0.01
HDAC6-235ENST00000495515 OR2M2Q96R28 347 aa15.12■□□□□ 0.01
HDAC6-235ENST00000495515 USB1Q9BQ65 265 aaKnown RBP15.12■□□□□ 0.01
HDAC6-235ENST00000495515 DGCR6LQ9BY27 220 aa15.12■□□□□ 0.01
HDAC6-235ENST00000495515 LINC00470Q9BZP3 86 aa15.12■□□□□ 0.01
HDAC6-235ENST00000495515 TXNIPQ9H3M7 391 aa15.12■□□□□ 0.01
HDAC6-235ENST00000495515 ZNF556Q9HAH1 456 aa15.12■□□□□ 0.01
HDAC6-235ENST00000495515 MCCC2Q9HCC0 563 aa15.12■□□□□ 0.01
HDAC6-235ENST00000495515 NPDC1Q9NQX5 325 aaPredicted RBP15.12■□□□□ 0.01
HDAC6-235ENST00000495515 GPR52Q9Y2T5 361 aa15.12■□□□□ 0.01
HDAC6-235ENST00000495515 INTS1Q8N201 2190 aaKnown RBP15.12■□□□□ 0.01
HDAC6-235ENST00000495515 SPTBN1Q01082 2364 aaKnown RBP15.12■□□□□ 0.01
HDAC6-235ENST00000495515 ZNF587BE7ETH6 402 aa15.11■□□□□ 0.01
HDAC6-235ENST00000495515 ADAP00813 363 aa15.11■□□□□ 0.01
HDAC6-235ENST00000495515 GASTP01350 101 aa15.11■□□□□ 0.01
HDAC6-235ENST00000495515 CD14P08571 375 aa15.11■□□□□ 0.01
HDAC6-235ENST00000495515 NR2C1P13056 603 aa15.11■□□□□ 0.01
HDAC6-235ENST00000495515 ANXA8P13928 327 aa15.11■□□□□ 0.01
HDAC6-235ENST00000495515 PSMB1P20618 241 aaKnown RBP15.11■□□□□ 0.01
HDAC6-235ENST00000495515 IST1P53990 364 aa15.11■□□□□ 0.01
HDAC6-235ENST00000495515 TGFBR3Q03167 851 aa15.11■□□□□ 0.01
HDAC6-235ENST00000495515 FAM27E3Q08E93 113 aa15.11■□□□□ 0.01
HDAC6-235ENST00000495515 FAPQ12884 760 aa15.11■□□□□ 0.01
HDAC6-235ENST00000495515 COX10Q12887 443 aa15.11■□□□□ 0.01
HDAC6-235ENST00000495515 ACKR1Q16570 336 aa15.11■□□□□ 0.01
HDAC6-235ENST00000495515 HIPK1Q86Z02 1210 aa15.11■□□□□ 0.01
HDAC6-235ENST00000495515 STEAP2Q8NFT2 490 aa15.11■□□□□ 0.01
HDAC6-235ENST00000495515 OR6N1Q8NGY5 312 aa15.11■□□□□ 0.01
HDAC6-235ENST00000495515 OR5K1Q8NHB7 308 aa15.11■□□□□ 0.01
HDAC6-235ENST00000495515 FANK1Q8TC84 345 aa15.11■□□□□ 0.01
HDAC6-235ENST00000495515 KISS1RQ969F8 398 aaPredicted RBP15.11■□□□□ 0.01
HDAC6-235ENST00000495515 ZNF566Q969W8 418 aa15.11■□□□□ 0.01
HDAC6-235ENST00000495515 CENPNQ96H22 339 aaPredicted RBP15.11■□□□□ 0.01
HDAC6-235ENST00000495515 SLC25A44Q96H78 314 aaPredicted RBP15.11■□□□□ 0.01
HDAC6-235ENST00000495515 LRR1Q96L50 414 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms