RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 ANKK1Q8NFD2 765 aa12.59□□□□□ -0.39
SCAP-213ENST00000494938 OR1K1Q8NGR3 316 aa12.59□□□□□ -0.39
SCAP-213ENST00000494938 LIPHQ8WWY8 451 aa12.59□□□□□ -0.39
SCAP-213ENST00000494938 IGFBPL1Q8WX77 278 aa12.59□□□□□ -0.39
SCAP-213ENST00000494938 AKAP1Q92667 903 aaKnown RBP eCLIP12.59□□□□□ -0.39
SCAP-213ENST00000494938 SGTBQ96EQ0 304 aa12.59□□□□□ -0.39
SCAP-213ENST00000494938 C7orf34Q96L11 122 aa12.59□□□□□ -0.39
SCAP-213ENST00000494938 LRR1Q96L50 414 aa12.59□□□□□ -0.39
SCAP-213ENST00000494938 PRRC1Q96M27 445 aa12.59□□□□□ -0.39
SCAP-213ENST00000494938 C1QTNF6Q9BXI9 259 aa12.59□□□□□ -0.39
SCAP-213ENST00000494938 ESRP2Q9H6T0 727 aaKnown RBP12.59□□□□□ -0.39
SCAP-213ENST00000494938 GPR35Q9HC97 309 aa12.59□□□□□ -0.39
SCAP-213ENST00000494938 B2RBV5 119 aa12.58□□□□□ -0.4
SCAP-213ENST00000494938 ZNF587BE7ETH6 402 aa12.58□□□□□ -0.4
SCAP-213ENST00000494938 C11orf98E9PRG8 122 aa12.58□□□□□ -0.4
SCAP-213ENST00000494938 OR6A2O95222 327 aa12.58□□□□□ -0.4
SCAP-213ENST00000494938 HIST1H2ABP04908 130 aa12.58□□□□□ -0.4
SCAP-213ENST00000494938 CD3EP07766 207 aa12.58□□□□□ -0.4
SCAP-213ENST00000494938 IFNGR1P15260 489 aa12.58□□□□□ -0.4
SCAP-213ENST00000494938 TCN1P20061 433 aaPredicted RBP12.58□□□□□ -0.4
SCAP-213ENST00000494938 ZNF83P51522 516 aa12.58□□□□□ -0.4
SCAP-213ENST00000494938 ARF1P84077 181 aaKnown RBP12.58□□□□□ -0.4
SCAP-213ENST00000494938 POU3F1Q03052 451 aaPredicted RBP12.58□□□□□ -0.4
SCAP-213ENST00000494938 IQCCQ4KMZ1 466 aa12.58□□□□□ -0.4
SCAP-213ENST00000494938 SAMD4BQ5PRF9 694 aaKnown RBP12.58□□□□□ -0.4
SCAP-213ENST00000494938 CARD17Q5XLA6 110 aa12.58□□□□□ -0.4
SCAP-213ENST00000494938 HIST3H2AQ7L7L0 130 aa12.58□□□□□ -0.4
SCAP-213ENST00000494938 ABHD12BQ7Z5M8 362 aaPredicted RBP12.58□□□□□ -0.4
SCAP-213ENST00000494938 DEFB107AQ8IZN7 70 aa12.58□□□□□ -0.4
SCAP-213ENST00000494938 OFCC1Q8IZS5 231 aa12.58□□□□□ -0.4
SCAP-213ENST00000494938 C17orf78Q8N4C9 275 aa12.58□□□□□ -0.4
SCAP-213ENST00000494938 PIK3C3Q8NEB9 887 aa12.58□□□□□ -0.4
SCAP-213ENST00000494938 NEUROG1Q92886 237 aa12.58□□□□□ -0.4
SCAP-213ENST00000494938 HIST1H2ACQ93077 130 aa12.58□□□□□ -0.4
SCAP-213ENST00000494938 ALKBH3Q96Q83 286 aaPredicted RBP12.58□□□□□ -0.4
SCAP-213ENST00000494938 NELFAQ9H3P2 528 aa12.58□□□□□ -0.4
SCAP-213ENST00000494938 NDUFAF4Q9P032 175 aa12.58□□□□□ -0.4
SCAP-213ENST00000494938 RPS6KA6Q9UK32 745 aa12.58□□□□□ -0.4
SCAP-213ENST00000494938 MED31Q9Y3C7 131 aa12.58□□□□□ -0.4
SCAP-213ENST00000494938 RNF115Q9Y4L5 304 aa12.58□□□□□ -0.4
SCAP-213ENST00000494938 ENPP4Q9Y6X5 453 aa12.58□□□□□ -0.4
SCAP-213ENST00000494938 ZNF726A6NNF4 738 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 SHISA9B4DS77 424 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 BLOC1S5-TXNDC5H3BN57 136 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 M0R3G1 203 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 HS3ST1O14792 307 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 CLOCKO15516 846 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 RNF13O43567 381 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 PIP5K1CO60331 668 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 MAKP20794 623 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 MNAT1P51948 309 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 PRPS1P60891 318 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 CAMK2DQ13557 499 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 LAPTM4AQ15012 233 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 TRAM2Q15035 370 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 TBRG1Q3YBR2 411 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 C1QTNF12Q5T7M4 302 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 HMBOX1Q6NT76 420 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 ANKRD16Q6P6B7 361 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 TBPL2Q6SJ96 375 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 C16orf89Q6UX73 402 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 RINLQ6ZS11 566 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 SLC35D2Q76EJ3 337 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 GPR137CQ8N3F9 429 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 ZNF611Q8N823 705 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 OR6X1Q8NH79 312 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 MAGEE2Q8TD90 523 aaPredicted RBP12.57□□□□□ -0.4
SCAP-213ENST00000494938 ALPK1Q96QP1 1244 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 PIP5K1AQ99755 562 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 FNDC11Q9BVV2 318 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 NMNAT1Q9HAN9 279 aaPredicted RBP12.57□□□□□ -0.4
SCAP-213ENST00000494938 CRLF2Q9HC73 371 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 AMDHD2Q9Y303 409 aa12.57□□□□□ -0.4
SCAP-213ENST00000494938 ROS1P08922 2347 aa12.56□□□□□ -0.4
SCAP-213ENST00000494938 A0A087WUU8 490 aa12.56□□□□□ -0.4
SCAP-213ENST00000494938 A0A096LPE4 126 aa12.56□□□□□ -0.4
SCAP-213ENST00000494938 A0A1W2PPZ6 126 aa12.56□□□□□ -0.4
SCAP-213ENST00000494938 HTR3EA5X5Y0 456 aa12.56□□□□□ -0.4
SCAP-213ENST00000494938 SERPINI2O75830 405 aa12.56□□□□□ -0.4
SCAP-213ENST00000494938 SEMG1P04279 462 aa12.56□□□□□ -0.4
SCAP-213ENST00000494938 UMPSP11172 480 aa12.56□□□□□ -0.4
SCAP-213ENST00000494938 HOXB1P14653 301 aaPredicted RBP12.56□□□□□ -0.4
SCAP-213ENST00000494938 CD40P25942 277 aa12.56□□□□□ -0.4
SCAP-213ENST00000494938 IFNA8P32881 189 aa12.56□□□□□ -0.4
SCAP-213ENST00000494938 AQP2P41181 271 aa12.56□□□□□ -0.4
SCAP-213ENST00000494938 BIDP55957 195 aa12.56□□□□□ -0.4
SCAP-213ENST00000494938 PRKCDQ05655 676 aa12.56□□□□□ -0.4
SCAP-213ENST00000494938 FHL1Q13642 323 aa12.56□□□□□ -0.4
SCAP-213ENST00000494938 CEACAM16Q2WEN9 425 aa12.56□□□□□ -0.4
SCAP-213ENST00000494938 SPATS1Q496A3 300 aa12.56□□□□□ -0.4
SCAP-213ENST00000494938 ZNF672Q499Z4 452 aaPredicted RBP12.56□□□□□ -0.4
SCAP-213ENST00000494938 C20orf204Q6ZNR8 217 aa12.56□□□□□ -0.4
SCAP-213ENST00000494938 MEX3DQ86XN8 651 aaKnown RBP12.56□□□□□ -0.4
SCAP-213ENST00000494938 KBTBD8Q8NFY9 601 aa12.56□□□□□ -0.4
SCAP-213ENST00000494938 MOSPD2Q8NHP6 518 aa12.56□□□□□ -0.4
SCAP-213ENST00000494938 TMEM54Q969K7 222 aa12.56□□□□□ -0.4
SCAP-213ENST00000494938 BPIFA2Q96DR5 249 aa12.56□□□□□ -0.4
SCAP-213ENST00000494938 PYURFQ96I23 114 aa12.56□□□□□ -0.4
SCAP-213ENST00000494938 BEX4Q9NWD9 120 aaPredicted RBP12.56□□□□□ -0.4
SCAP-213ENST00000494938 NDE1Q9NXR1 346 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms