RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 BOD1Q96IK1 185 aa8.35□□□□□ -1.07
MSH5-218ENST00000494646 MOGAT1Q96PD6 335 aa8.35□□□□□ -1.07
MSH5-218ENST00000494646 OR2M2Q96R28 347 aa8.35□□□□□ -1.07
MSH5-218ENST00000494646 VRK1Q99986 396 aaPredicted RBP8.35□□□□□ -1.07
MSH5-218ENST00000494646 ASPNQ9BXN1 380 aa8.35□□□□□ -1.07
MSH5-218ENST00000494646 VIPAS39Q9H9C1 493 aa8.35□□□□□ -1.07
MSH5-218ENST00000494646 MED29Q9NX70 200 aa8.35□□□□□ -1.07
MSH5-218ENST00000494646 TESQ9UGI8 421 aaKnown RBP8.35□□□□□ -1.07
MSH5-218ENST00000494646 MALRD1Q5VYJ5 2156 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 ARPC4-TTLL3A0A0A6YYG9 625 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 ZNF503-AS2A6NEH8 195 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 C11orf98E9PRG8 122 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 FBP2O00757 339 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 TRAF3IP2O43734 574 aaPredicted RBP8.34□□□□□ -1.07
MSH5-218ENST00000494646 CH25HO95992 272 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 THY1P04216 161 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 CECR9P0C854 216 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 BMP4P12644 408 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 HOXB1P14653 301 aaPredicted RBP8.34□□□□□ -1.07
MSH5-218ENST00000494646 CBR1P16152 277 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 SERPINF1P36955 418 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 IDH3GP51553 393 aaPredicted RBP8.34□□□□□ -1.07
MSH5-218ENST00000494646 EFNA4P52798 201 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 PCBP3P57721 371 aaKnown RBP8.34□□□□□ -1.07
MSH5-218ENST00000494646 NAAAQ02083 359 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 POU3F1Q03052 451 aaPredicted RBP8.34□□□□□ -1.07
MSH5-218ENST00000494646 RBBP4Q09028 425 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 NPRL3Q12980 569 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 CARTPTQ16568 116 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 C5orf46Q6UWT4 87 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 LINC00114Q6XXX2 140 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 MYPOPQ86VE0 399 aaPredicted RBP8.34□□□□□ -1.07
MSH5-218ENST00000494646 C20orf196Q8IYI0 205 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 LRRC17Q8N6Y2 441 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 MAGEE2Q8TD90 523 aaPredicted RBP8.34□□□□□ -1.07
MSH5-218ENST00000494646 FAM168AQ92567 244 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 SLC41A3Q96GZ6 507 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 EPYCQ99645 322 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 MDFIQ99750 246 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 ARHGDIGQ99819 225 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 TMEM120AQ9BXJ8 343 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 KAT8Q9H7Z6 458 aaKnown RBP8.34□□□□□ -1.07
MSH5-218ENST00000494646 OBP2BQ9NPH6 170 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 CA10Q9NS85 328 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 METRNQ9UJH8 293 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 USP22Q9UPT9 525 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 RCE1Q9Y256 329 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 POFUT2Q9Y2G5 429 aa8.34□□□□□ -1.07
MSH5-218ENST00000494646 LOC100653049A0A140TA62 436 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 LOC102725191A0A1B0GVB3 256 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 SH3PXD2BA1X283 911 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 H7C417 338 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 KPNA4O00629 521 aaPredicted RBP8.33□□□□□ -1.08
MSH5-218ENST00000494646 PLPP3O14495 311 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 AKAP8O43823 692 aaKnown RBP8.33□□□□□ -1.08
MSH5-218ENST00000494646 CD5LO43866 347 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 CRLF1O75462 422 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 KRT34O76011 436 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 OR6A2O95222 327 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 HLA-HP01893 362 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 OR4A8P0C604 315 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 ADORA3P0DMS8 318 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 CD79AP11912 226 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 THBS4P35443 961 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 GZMMP51124 257 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 ARFIP2P53365 341 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 SH3BGRP55822 239 aaPredicted RBP8.33□□□□□ -1.08
MSH5-218ENST00000494646 BIDP55957 195 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 DSCR9P59020 149 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 HGFACQ04756 655 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 CYLC2Q14093 348 aaPredicted RBP8.33□□□□□ -1.08
MSH5-218ENST00000494646 MFSD13AQ14CX5 517 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 MMEL1Q495T6 779 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 NANOGP8Q6NSW7 305 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 TTC33Q6PID6 262 aaPredicted RBP8.33□□□□□ -1.08
MSH5-218ENST00000494646 NHLRC1Q6VVB1 395 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 WDR88Q6ZMY6 472 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 MDP1Q86V88 176 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 TSPYL5Q86VY4 417 aaPredicted RBP8.33□□□□□ -1.08
MSH5-218ENST00000494646 TMEM123Q8N131 208 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 ZCCHC24Q8N2G6 241 aaKnown RBP8.33□□□□□ -1.08
MSH5-218ENST00000494646 ANKS4BQ8N8V4 417 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 OR6N1Q8NGY5 312 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 OR5J2Q8NH18 312 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 ADAMTS16Q8TE57 1224 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 TSPEARQ8WU66 669 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 TAMM41Q96BW9 452 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 SORCS2Q96PQ0 1159 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 TNFRSF13CQ96RJ3 184 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 TMEM43Q9BTV4 400 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 KATNB1Q9BVA0 655 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 NANOGQ9H9S0 305 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 MRPL39Q9NYK5 338 aaKnown RBP8.33□□□□□ -1.08
MSH5-218ENST00000494646 CRNNQ9UBG3 495 aaPredicted RBP8.33□□□□□ -1.08
MSH5-218ENST00000494646 SLC7A7Q9UM01 511 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 CORINQ9Y5Q5 1042 aa8.33□□□□□ -1.08
MSH5-218ENST00000494646 ZNF99A8MXY4 864 aaPredicted RBP8.32□□□□□ -1.08
MSH5-218ENST00000494646 B9A039 149 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 CHP2O43745 196 aa8.32□□□□□ -1.08
MSH5-218ENST00000494646 SHOX2O60902 331 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms