RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 CMTM5Q96DZ9 223 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 MPP4Q96JB8 637 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 KCTD14Q9BQ13 255 aaPredicted RBP12.86□□□□□ -0.35
ATG4B-224ENST00000494132 ZNF426Q9BUY5 554 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 TMUB1Q9BVT8 246 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 LINC00470Q9BZP3 86 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 CRLF2Q9HC73 371 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 GPR35Q9HC97 309 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 NANSQ9NR45 359 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 C20orf141Q9NUB4 165 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 CISD1Q9NZ45 108 aaKnown RBP12.86□□□□□ -0.35
ATG4B-224ENST00000494132 EGFL7Q9UHF1 273 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 RIMS3Q9UJD0 308 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 POU2F3Q9UKI9 436 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 AMDHD2Q9Y303 409 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 MAGED1Q9Y5V3 778 aaPredicted RBP12.86□□□□□ -0.35
ATG4B-224ENST00000494132 ARFGEF3Q5TH69 2177 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 AKAP8O43823 692 aaKnown RBP12.85□□□□□ -0.35
ATG4B-224ENST00000494132 OR5F1O95221 314 aa12.85□□□□□ -0.35
ATG4B-224ENST00000494132 OR6A2O95222 327 aa12.85□□□□□ -0.35
ATG4B-224ENST00000494132 SERPINA1P01009 418 aa12.85□□□□□ -0.35
ATG4B-224ENST00000494132 IFNGR1P15260 489 aa12.85□□□□□ -0.35
ATG4B-224ENST00000494132 PTH2RP49190 550 aa12.85□□□□□ -0.35
ATG4B-224ENST00000494132 BIDP55957 195 aa12.85□□□□□ -0.35
ATG4B-224ENST00000494132 PRPS1P60891 318 aa12.85□□□□□ -0.35
ATG4B-224ENST00000494132 PGGHGQ32M88 737 aa12.85□□□□□ -0.35
ATG4B-224ENST00000494132 NHLRC1Q6VVB1 395 aa12.85□□□□□ -0.35
ATG4B-224ENST00000494132 NANOGNBQ7Z5D8 188 aa12.85□□□□□ -0.35
ATG4B-224ENST00000494132 MEX3DQ86XN8 651 aaKnown RBP12.85□□□□□ -0.35
ATG4B-224ENST00000494132 PIK3C3Q8NEB9 887 aa12.85□□□□□ -0.35
ATG4B-224ENST00000494132 SMAP2Q8WU79 429 aaPredicted RBP12.85□□□□□ -0.35
ATG4B-224ENST00000494132 BCL2L2Q92843 193 aaPredicted RBP12.85□□□□□ -0.35
ATG4B-224ENST00000494132 FAM162AQ96A26 154 aa12.85□□□□□ -0.35
ATG4B-224ENST00000494132 RADILQ96JH8 1075 aa12.85□□□□□ -0.35
ATG4B-224ENST00000494132 HSH2DQ96JZ2 352 aa12.85□□□□□ -0.35
ATG4B-224ENST00000494132 PIP5K1AQ99755 562 aa12.85□□□□□ -0.35
ATG4B-224ENST00000494132 SEC61A2Q9H9S3 476 aa12.85□□□□□ -0.35
ATG4B-224ENST00000494132 FKRPQ9H9S5 495 aa12.85□□□□□ -0.35
ATG4B-224ENST00000494132 TAS2R5Q9NYW4 299 aa12.85□□□□□ -0.35
ATG4B-224ENST00000494132 ADA2Q9NZK5 511 aa12.85□□□□□ -0.35
ATG4B-224ENST00000494132 ABCD2Q9UBJ2 740 aa12.85□□□□□ -0.35
ATG4B-224ENST00000494132 A4GNTQ9UNA3 340 aa12.85□□□□□ -0.35
ATG4B-224ENST00000494132 AP3M1Q9Y2T2 418 aa12.85□□□□□ -0.35
ATG4B-224ENST00000494132 MAP1AP78559 2803 aaPredicted RBP12.84□□□□□ -0.35
ATG4B-224ENST00000494132 LOC102725191A0A1B0GVB3 256 aa12.84□□□□□ -0.35
ATG4B-224ENST00000494132 ZNF503-AS2A6NEH8 195 aa12.84□□□□□ -0.35
ATG4B-224ENST00000494132 OR6C65A6NJZ3 312 aa12.84□□□□□ -0.35
ATG4B-224ENST00000494132 E7EQL1 145 aa12.84□□□□□ -0.35
ATG4B-224ENST00000494132 ATP6V1G2-DDX39BF2Z307 99 aa12.84□□□□□ -0.35
ATG4B-224ENST00000494132 BLOC1S5-TXNDC5H3BN57 136 aa12.84□□□□□ -0.35
ATG4B-224ENST00000494132 RNF13O43567 381 aa12.84□□□□□ -0.35
ATG4B-224ENST00000494132 MT-ND1P03886 318 aa12.84□□□□□ -0.35
ATG4B-224ENST00000494132 DANCRP0C864 163 aa12.84□□□□□ -0.35
ATG4B-224ENST00000494132 FUT1P19526 365 aa12.84□□□□□ -0.35
ATG4B-224ENST00000494132 PTAFRP25105 342 aa12.84□□□□□ -0.35
ATG4B-224ENST00000494132 PRDX6P30041 224 aa12.84□□□□□ -0.35
ATG4B-224ENST00000494132 UBE2NP61088 152 aaKnown RBP12.84□□□□□ -0.35
ATG4B-224ENST00000494132 RPS4XP62701 263 aaKnown RBP12.84□□□□□ -0.35
ATG4B-224ENST00000494132 YTHDF3Q7Z739 585 aaKnown RBP12.84□□□□□ -0.35
ATG4B-224ENST00000494132 PXKQ7Z7A4 578 aa12.84□□□□□ -0.35
ATG4B-224ENST00000494132 PIGWQ7Z7B1 504 aa12.84□□□□□ -0.35
ATG4B-224ENST00000494132 OR6N1Q8NGY5 312 aa12.84□□□□□ -0.35
ATG4B-224ENST00000494132 TMEM239Q8WW34 195 aa12.84□□□□□ -0.35
ATG4B-224ENST00000494132 LZICQ8WZA0 190 aa12.84□□□□□ -0.35
ATG4B-224ENST00000494132 PRRC1Q96M27 445 aa12.84□□□□□ -0.35
ATG4B-224ENST00000494132 Q96MF0 132 aa12.84□□□□□ -0.35
ATG4B-224ENST00000494132 ARL8BQ9NVJ2 186 aa12.84□□□□□ -0.35
ATG4B-224ENST00000494132 ARL2BPQ9Y2Y0 163 aa12.84□□□□□ -0.35
ATG4B-224ENST00000494132 NOX1Q9Y5S8 564 aa12.84□□□□□ -0.35
ATG4B-224ENST00000494132 ZNF726A6NNF4 738 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 DYNC1I1O14576 645 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 WNT11O96014 354 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 HIST1H2ABP04908 130 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 F13BP05160 661 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 CELA3BP08861 270 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 ASAH2BP0C7U1 165 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 TCN1P20061 433 aaPredicted RBP12.83□□□□□ -0.36
ATG4B-224ENST00000494132 MSX2P35548 267 aaPredicted RBP12.83□□□□□ -0.36
ATG4B-224ENST00000494132 CAPZA2P47755 286 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 ATP5J2P56134 94 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 RPL18Q07020 188 aaKnown RBP12.83□□□□□ -0.36
ATG4B-224ENST00000494132 IFI44LQ53G44 452 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 ANKRD16Q6P6B7 361 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 FKBP9P1Q75LS8 142 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 CBLL1Q75N03 491 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 SLC35D2Q76EJ3 337 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 HIST3H2AQ7L7L0 130 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 SSX8Q7RTT4 187 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 MYPOPQ86VE0 399 aaPredicted RBP12.83□□□□□ -0.36
ATG4B-224ENST00000494132 C20orf196Q8IYI0 205 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 LRRC75A-AS1Q8N1F1 130 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 HIST1H2ACQ93077 130 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 GTPBP3Q969Y2 492 aaKnown RBP12.83□□□□□ -0.36
ATG4B-224ENST00000494132 SGTBQ96EQ0 304 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 SLC19A3Q9BZV2 496 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 GSX1Q9H4S2 264 aaPredicted RBP12.83□□□□□ -0.36
ATG4B-224ENST00000494132 CXorf56Q9H5V9 222 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 SPAG4Q9NPE6 437 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 ZNF229Q9UJW7 825 aa12.83□□□□□ -0.36
ATG4B-224ENST00000494132 MOKQ9UQ07 419 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms