RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 UCK2Q9BZX2 261 aa12.92□□□□□ -0.34
BRCA1-223ENST00000494123 OR52D1Q9H346 318 aa12.92□□□□□ -0.34
BRCA1-223ENST00000494123 MED29Q9NX70 200 aa12.92□□□□□ -0.34
BRCA1-223ENST00000494123 ZNF726A6NNF4 738 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 FAM90A27PA6NNH2 459 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 BCL10O95999 233 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 CD8BP10966 210 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 ANPEPP15144 967 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 AGAP20933 346 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 DAP3P51398 398 aaKnown RBP12.91□□□□□ -0.34
BRCA1-223ENST00000494123 CTXN1P60606 82 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 COX10Q12887 443 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 TOP3AQ13472 1001 aaPredicted RBP12.91□□□□□ -0.34
BRCA1-223ENST00000494123 FHL1Q13642 323 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 SLC25A35Q3KQZ1 300 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 ZNF620Q6ZNG0 422 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 RASSF6Q6ZTQ3 369 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.91□□□□□ -0.34
BRCA1-223ENST00000494123 LUZP2Q86TE4 346 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 ZIC4Q8N9L1 334 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 OR52L1Q8NGH7 329 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 ITLN2Q8WWU7 325 aaPredicted RBP12.91□□□□□ -0.34
BRCA1-223ENST00000494123 POLDIP3Q9BY77 421 aaKnown RBP12.91□□□□□ -0.34
BRCA1-223ENST00000494123 GABARAPL1Q9H0R8 117 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 OPN3Q9H1Y3 402 aaPredicted RBP12.91□□□□□ -0.34
BRCA1-223ENST00000494123 IL20RAQ9UHF4 553 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 RCE1Q9Y256 329 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 CDH10Q9Y6N8 788 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 RELNP78509 3460 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 FLNCQ14315 2725 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 H3BN98 237 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 SLC6A6P31641 620 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 OR3A2P47893 321 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 SELENOPP49908 381 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 BIDP55957 195 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 MELKQ14680 651 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 ACKR1Q16570 336 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 RFX4Q33E94 735 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 HDDC2Q7Z4H3 204 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 UBE2J2Q8N2K1 259 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 RELL2Q8NC24 303 aaPredicted RBP12.91□□□□□ -0.34
BRCA1-223ENST00000494123 LILRB4Q8NHJ6 448 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 DNAJC9Q8WXX5 260 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 TXNDC15Q96J42 360 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 ADAD1Q96M93 576 aaKnown RBP12.91□□□□□ -0.34
BRCA1-223ENST00000494123 CIB1Q99828 191 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 EMC6Q9BV81 110 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 KATNB1Q9BVA0 655 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 TXNIPQ9H3M7 391 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 EGLN3Q9H6Z9 239 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 DCLRE1BQ9H816 532 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 PLSCR4Q9NRQ2 329 aa12.91□□□□□ -0.34
BRCA1-223ENST00000494123 SLC35F4A4IF30 521 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 PDLIM1O00151 329 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 MSTNO14793 375 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 SLC43A1O75387 559 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 KRT33AO76009 404 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 SOX14O95416 240 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 CLDN14O95500 239 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 CD14P08571 375 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 ZNF26P17031 533 aaPredicted RBP12.9□□□□□ -0.34
BRCA1-223ENST00000494123 NTF4P34130 210 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 ERVK-25P63136 954 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 FAHD1Q6P587 224 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 KLHL17Q6TDP4 642 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 CD300LDQ6UXZ3 194 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 TFAP2EQ6VUC0 442 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 THSD4Q6ZMP0 1018 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 DPY19L2P2Q6ZN68 376 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 KIF18BQ86Y91 864 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 LRRC75AQ8NAA5 344 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 SSC4DQ8WTU2 575 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 EME1Q96AY2 570 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 LRRC46Q96FV0 321 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 SAMD8Q96LT4 415 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 IFT27Q9BW83 186 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 OSBPL10Q9BXB5 764 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 SLCO5A1Q9H2Y9 848 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 KCNJ16Q9NPI9 418 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 PAPOLBQ9NRJ5 636 aaKnown RBP12.9□□□□□ -0.34
BRCA1-223ENST00000494123 KRT84Q9NSB2 600 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 TBC1D23Q9NUY8 699 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 STX18Q9P2W9 335 aaKnown RBP12.9□□□□□ -0.34
BRCA1-223ENST00000494123 GRHPRQ9UBQ7 328 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 UPB1Q9UBR1 384 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 POFUT2Q9Y2G5 429 aa12.9□□□□□ -0.34
BRCA1-223ENST00000494123 NPIPB13A6NJU9 1138 aa12.89□□□□□ -0.35
BRCA1-223ENST00000494123 OR6C65A6NJZ3 312 aa12.89□□□□□ -0.35
BRCA1-223ENST00000494123 NPIPB4C9JG80 1138 aa12.89□□□□□ -0.35
BRCA1-223ENST00000494123 CGAP01215 116 aa12.89□□□□□ -0.35
BRCA1-223ENST00000494123 IGHV3-9P01782 118 aa12.89□□□□□ -0.35
BRCA1-223ENST00000494123 ASCL1P50553 236 aa12.89□□□□□ -0.35
BRCA1-223ENST00000494123 DAPP51397 102 aa12.89□□□□□ -0.35
BRCA1-223ENST00000494123 RPS6KA3P51812 740 aa12.89□□□□□ -0.35
BRCA1-223ENST00000494123 FXYD6P3P58550 94 aa12.89□□□□□ -0.35
BRCA1-223ENST00000494123 RPL27P61353 136 aaKnown RBP12.89□□□□□ -0.35
BRCA1-223ENST00000494123 CAMK2DQ13557 499 aa12.89□□□□□ -0.35
BRCA1-223ENST00000494123 SLC36A3Q495N2 470 aa12.89□□□□□ -0.35
BRCA1-223ENST00000494123 CLEC12AQ5QGZ9 265 aa12.89□□□□□ -0.35
BRCA1-223ENST00000494123 CARD17Q5XLA6 110 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms