RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 NPAS1Q99742 590 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 CIB1Q99828 191 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 TMEM43Q9BTV4 400 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 KLHL4Q9C0H6 718 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 VCXQ9H320 206 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 VCX3BQ9H321 246 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 ZNF556Q9HAH1 456 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 ZNF629Q9UEG4 869 aaPredicted RBP10.85□□□□□ -0.67
UPF3A-210ENST00000493727 MED12LQ86YW9 2145 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 PDLIM1O00151 329 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 ZNF208O43345 1280 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 CTAG2O75638 210 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 IFI30P13284 250 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 IL11P20809 199 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 PEX2P28328 305 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 GTF2E2P29084 291 aaKnown RBP10.84□□□□□ -0.67
UPF3A-210ENST00000493727 UQCRC1P31930 480 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 LIMS1P48059 325 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 HMGA2P52926 109 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 IL1RL1Q01638 556 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 SEC23BQ15437 767 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 LRRC36Q1X8D7 754 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 NHSL2Q5HYW2 709 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 LPCAT4Q643R3 524 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 VASNQ6EMK4 673 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 TBPL2Q6SJ96 375 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 C5orf46Q6UWT4 87 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 ZBTB49Q6ZSB9 765 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 KIF18BQ86Y91 864 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 EPHX4Q8IUS5 362 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 RNF113BQ8IZP6 322 aaKnown RBP10.84□□□□□ -0.67
UPF3A-210ENST00000493727 HS3ST5Q8IZT8 346 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 FAM222BQ8WU58 562 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 RNF141Q8WVD5 230 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 RNASE6Q93091 150 aaKnown RBP10.84□□□□□ -0.67
UPF3A-210ENST00000493727 SGTBQ96EQ0 304 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 OR5B2Q96R09 309 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 TIMP4Q99727 224 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 POLDIP3Q9BY77 421 aaKnown RBP10.84□□□□□ -0.67
UPF3A-210ENST00000493727 SLC19A3Q9BZV2 496 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 OR11A1Q9GZK7 315 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 PRDM14Q9GZV8 571 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 TMEM5Q9Y2B1 443 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 SLC6A5Q9Y345 797 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 ORC6Q9Y5N6 252 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 HEATR5AQ86XA9 2040 aa10.84□□□□□ -0.67
UPF3A-210ENST00000493727 IGKV1D-42A0A075B6H8 117 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 TRAV36DV7A0A075B6V5 113 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 ARRDC5A6NEK1 342 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 CD8B2A6NJW9 211 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 SEC14L5O43304 696 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 GOSR1O95249 250 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 OPN1LWP04000 364 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 SAGP10523 405 aaPredicted RBP10.83□□□□□ -0.68
UPF3A-210ENST00000493727 IMPDH2P12268 514 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 ANXA8P13928 327 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 BMP5P22003 454 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 PRKACGP22612 351 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 IDUAP35475 653 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 GPR4P46093 362 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 B3GALT5-AS1P59052 145 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 TMEM44Q2T9K0 475 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 TMEM176BQ3YBM2 270 aaPredicted RBP10.83□□□□□ -0.68
UPF3A-210ENST00000493727 SYT14P1Q58G82 188 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 C1orf140Q5VVS0 124 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 NSUN5P2Q63ZY6 315 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 PGBD2Q6P3X8 592 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 SEM1Q6ZVN7 128 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 LSRQ86X29 649 aaPredicted RBP10.83□□□□□ -0.68
UPF3A-210ENST00000493727 MEX3DQ86XN8 651 aaKnown RBP10.83□□□□□ -0.68
UPF3A-210ENST00000493727 CBR4Q8N4T8 237 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 RELL2Q8NC24 303 aaPredicted RBP10.83□□□□□ -0.68
UPF3A-210ENST00000493727 GNPDA2Q8TDQ7 276 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 DNAJA3Q96EY1 480 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 KLHL15Q96M94 604 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 RBM4BQ9BQ04 359 aaKnown RBP10.83□□□□□ -0.68
UPF3A-210ENST00000493727 FUZQ9BT04 418 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 ZNF426Q9BUY5 554 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 RBM4Q9BWF3 364 aaKnown RBP10.83□□□□□ -0.68
UPF3A-210ENST00000493727 TAPBPLQ9BX59 468 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 GABARAPL1Q9H0R8 117 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 LIME1Q9H400 295 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 ST6GALNAC2Q9UJ37 374 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 MGAT4BQ9UQ53 548 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 CAMK2AQ9UQM7 478 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 ZNF337Q9Y3M9 751 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 MAGED1Q9Y5V3 778 aaPredicted RBP10.83□□□□□ -0.68
UPF3A-210ENST00000493727 AP4B1Q9Y6B7 739 aa10.83□□□□□ -0.68
UPF3A-210ENST00000493727 ZC3H12DA2A288 527 aaKnown RBP10.82□□□□□ -0.68
UPF3A-210ENST00000493727 EFCAB9A8MZ26 197 aa10.82□□□□□ -0.68
UPF3A-210ENST00000493727 EI24O14681 340 aa10.82□□□□□ -0.68
UPF3A-210ENST00000493727 CASQ2O14958 399 aaPredicted RBP10.82□□□□□ -0.68
UPF3A-210ENST00000493727 IL18BPO95998 194 aa10.82□□□□□ -0.68
UPF3A-210ENST00000493727 ACTL6AO96019 429 aa10.82□□□□□ -0.68
UPF3A-210ENST00000493727 ADAP00813 363 aa10.82□□□□□ -0.68
UPF3A-210ENST00000493727 CD8BP10966 210 aa10.82□□□□□ -0.68
UPF3A-210ENST00000493727 POU2F1P14859 743 aa10.82□□□□□ -0.68
UPF3A-210ENST00000493727 CBLP22681 906 aa10.82□□□□□ -0.68
UPF3A-210ENST00000493727 CHMP24386 653 aa10.82□□□□□ -0.68
UPF3A-210ENST00000493727 OPRM1P35372 400 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms