RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 THBS4P35443 961 aa12.71□□□□□ -0.37
ATG4B-223ENST00000493618 HGFACQ04756 655 aa12.71□□□□□ -0.37
ATG4B-223ENST00000493618 LOXL1Q08397 574 aaPredicted RBP12.71□□□□□ -0.37
ATG4B-223ENST00000493618 CAMK2DQ13557 499 aa12.71□□□□□ -0.37
ATG4B-223ENST00000493618 NFYCQ13952 458 aa12.71□□□□□ -0.37
ATG4B-223ENST00000493618 GGTLC2Q14390 218 aa12.71□□□□□ -0.37
ATG4B-223ENST00000493618 NPTX1Q15818 432 aa12.71□□□□□ -0.37
ATG4B-223ENST00000493618 ADIPOQQ15848 244 aa12.71□□□□□ -0.37
ATG4B-223ENST00000493618 DUSP7Q16829 419 aa12.71□□□□□ -0.37
ATG4B-223ENST00000493618 MDP1Q86V88 176 aa12.71□□□□□ -0.37
ATG4B-223ENST00000493618 HIPK1Q86Z02 1210 aa12.71□□□□□ -0.37
ATG4B-223ENST00000493618 RBM45Q8IUH3 476 aaKnown RBP12.71□□□□□ -0.37
ATG4B-223ENST00000493618 C20orf196Q8IYI0 205 aa12.71□□□□□ -0.37
ATG4B-223ENST00000493618 C11orf65Q8NCR3 313 aa12.71□□□□□ -0.37
ATG4B-223ENST00000493618 BHLHE22Q8NFJ8 381 aaPredicted RBP12.71□□□□□ -0.37
ATG4B-223ENST00000493618 OR4D11Q8NGI4 311 aa12.71□□□□□ -0.37
ATG4B-223ENST00000493618 SLC41A3Q96GZ6 507 aa12.71□□□□□ -0.37
ATG4B-223ENST00000493618 ANKRD27Q96NW4 1050 aa12.71□□□□□ -0.37
ATG4B-223ENST00000493618 EPYCQ99645 322 aa12.71□□□□□ -0.37
ATG4B-223ENST00000493618 CGREF1Q99674 301 aa12.71□□□□□ -0.37
ATG4B-223ENST00000493618 RABEP2Q9H5N1 569 aa12.71□□□□□ -0.37
ATG4B-223ENST00000493618 FKBP7Q9Y680 259 aa12.71□□□□□ -0.37
ATG4B-223ENST00000493618 RTTNQ86VV8 2226 aa12.71□□□□□ -0.37
ATG4B-223ENST00000493618 A0A0G2JND7 137 aa12.7□□□□□ -0.38
ATG4B-223ENST00000493618 SLC35F4A4IF30 521 aa12.7□□□□□ -0.38
ATG4B-223ENST00000493618 ZNF99A8MXY4 864 aaPredicted RBP12.7□□□□□ -0.38
ATG4B-223ENST00000493618 C11orf98E9PRG8 122 aa12.7□□□□□ -0.38
ATG4B-223ENST00000493618 M0QX08 132 aa12.7□□□□□ -0.38
ATG4B-223ENST00000493618 IGKV3-15P01624 115 aa12.7□□□□□ -0.38
ATG4B-223ENST00000493618 IGHV4-31P0DP07 118 aa12.7□□□□□ -0.38
ATG4B-223ENST00000493618 CBR1P16152 277 aa12.7□□□□□ -0.38
ATG4B-223ENST00000493618 PDLIM4P50479 330 aa12.7□□□□□ -0.38
ATG4B-223ENST00000493618 PCBP3P57721 371 aaKnown RBP12.7□□□□□ -0.38
ATG4B-223ENST00000493618 SF3A3Q12874 501 aaKnown RBP eCLIP12.7□□□□□ -0.381e-6■■■■□ 19.8
ATG4B-223ENST00000493618 C3orf36Q3SXR2 165 aa12.7□□□□□ -0.38
ATG4B-223ENST00000493618 ENTPD8Q5MY95 495 aa12.7□□□□□ -0.38
ATG4B-223ENST00000493618 WDR88Q6ZMY6 472 aa12.7□□□□□ -0.38
ATG4B-223ENST00000493618 CXXC5Q7LFL8 322 aaKnown RBP12.7□□□□□ -0.38
ATG4B-223ENST00000493618 HDXQ7Z353 690 aa12.7□□□□□ -0.38
ATG4B-223ENST00000493618 ADPRHL1Q8NDY3 354 aa12.7□□□□□ -0.38
ATG4B-223ENST00000493618 OR6T1Q8NGN1 323 aa12.7□□□□□ -0.38
ATG4B-223ENST00000493618 ZNF317Q96PQ6 595 aaPredicted RBP12.7□□□□□ -0.38
ATG4B-223ENST00000493618 NOX3Q9HBY0 568 aa12.7□□□□□ -0.38
ATG4B-223ENST00000493618 CORINQ9Y5Q5 1042 aa12.7□□□□□ -0.38
ATG4B-223ENST00000493618 MALRD1Q5VYJ5 2156 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 IGHV2OR16-5A0A0B4J2B6 119 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 LOC102725191A0A1B0GVB3 256 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 SH3PXD2BA1X283 911 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 B9A039 149 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 hCG_2039718K7EN88 272 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 KPNA4O00629 521 aaPredicted RBP12.69□□□□□ -0.38
ATG4B-223ENST00000493618 PLPP3O14495 311 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 EDF1O60869 148 aaKnown RBP12.69□□□□□ -0.38
ATG4B-223ENST00000493618 HLA-HP01893 362 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 THY1P04216 161 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 CSF3P09919 207 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 CD79AP11912 226 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 HOXB1P14653 301 aaPredicted RBP12.69□□□□□ -0.38
ATG4B-223ENST00000493618 USF1P22415 310 aaPredicted RBP12.69□□□□□ -0.38
ATG4B-223ENST00000493618 VLDLRP98155 873 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 PIGFQ07326 219 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 PUDPQ08623 228 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 MFSD13AQ14CX5 517 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 CHRFAM7AQ494W8 412 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 CYB5R2Q6BCY4 276 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 KRT80Q6KB66 452 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 NHLRC1Q6VVB1 395 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 SPATA21Q7Z572 469 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 ZCCHC24Q8N2G6 241 aaKnown RBP12.69□□□□□ -0.38
ATG4B-223ENST00000493618 SVOPLQ8N434 492 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 DPP10Q8N608 796 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 SCAIQ8N9R8 606 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 ANKK1Q8NFD2 765 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 OR4F15Q8NGB8 312 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 OR6N1Q8NGY5 312 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 OR6S1Q8NH40 331 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 PROX1Q92786 737 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 TAMM41Q96BW9 452 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 FOXN4Q96NZ1 517 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 KCNK17Q96T54 332 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 PIMREGQ9BSJ6 248 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 TMEM43Q9BTV4 400 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 PLK3Q9H4B4 646 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 MRPL39Q9NYK5 338 aaKnown RBP12.69□□□□□ -0.38
ATG4B-223ENST00000493618 TRIM33Q9UPN9 1127 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 USP22Q9UPT9 525 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 POFUT2Q9Y2G5 429 aa12.69□□□□□ -0.38
ATG4B-223ENST00000493618 ZNF726A6NNF4 738 aa12.68□□□□□ -0.38
ATG4B-223ENST00000493618 VWC2LB2RUY7 222 aa12.68□□□□□ -0.38
ATG4B-223ENST00000493618 LYPD3O95274 346 aa12.68□□□□□ -0.38
ATG4B-223ENST00000493618 CH25HO95992 272 aa12.68□□□□□ -0.38
ATG4B-223ENST00000493618 ADORA3P0DMS8 318 aa12.68□□□□□ -0.38
ATG4B-223ENST00000493618 B4GALT1P15291 398 aa12.68□□□□□ -0.38
ATG4B-223ENST00000493618 NPR2P20594 1047 aa12.68□□□□□ -0.38
ATG4B-223ENST00000493618 CD247P20963 164 aa12.68□□□□□ -0.38
ATG4B-223ENST00000493618 PAX7P23759 505 aa12.68□□□□□ -0.38
ATG4B-223ENST00000493618 ARR3P36575 388 aa12.68□□□□□ -0.38
ATG4B-223ENST00000493618 BIDP55957 195 aa12.68□□□□□ -0.38
ATG4B-223ENST00000493618 LSM11P83369 360 aaKnown RBP eCLIP12.68□□□□□ -0.38
ATG4B-223ENST00000493618 RBBP4Q09028 425 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms