RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 UBE2J2Q8N2K1 259 aa10.25□□□□□ -0.77
CTSA-209ENST00000493522 SLC7A13Q8TCU3 470 aa10.25□□□□□ -0.77
CTSA-209ENST00000493522 BPIFA2Q96DR5 249 aa10.25□□□□□ -0.77
CTSA-209ENST00000493522 FAM46AQ96IP4 442 aaKnown RBP10.25□□□□□ -0.77
CTSA-209ENST00000493522 DHRS1Q96LJ7 313 aa10.25□□□□□ -0.77
CTSA-209ENST00000493522 ALPK1Q96QP1 1244 aa10.25□□□□□ -0.77
CTSA-209ENST00000493522 KRCC1Q9NPI7 259 aaPredicted RBP10.25□□□□□ -0.77
CTSA-209ENST00000493522 PARPBPQ9NWS1 579 aa10.25□□□□□ -0.77
CTSA-209ENST00000493522 ELOVL5Q9NYP7 299 aa10.25□□□□□ -0.77
CTSA-209ENST00000493522 TMEM5Q9Y2B1 443 aa10.25□□□□□ -0.77
CTSA-209ENST00000493522 EFCAB9A8MZ26 197 aa10.24□□□□□ -0.77
CTSA-209ENST00000493522 MS4A18H0YCH9 400 aa10.24□□□□□ -0.77
CTSA-209ENST00000493522 BLOC1S5-TXNDC5H3BN57 136 aa10.24□□□□□ -0.77
CTSA-209ENST00000493522 PLPP3O14495 311 aa10.24□□□□□ -0.77
CTSA-209ENST00000493522 RNF13O43567 381 aa10.24□□□□□ -0.77
CTSA-209ENST00000493522 TRAF3IP2O43734 574 aaPredicted RBP10.24□□□□□ -0.77
CTSA-209ENST00000493522 ASAH2BP0C7U1 165 aa10.24□□□□□ -0.77
CTSA-209ENST00000493522 CCKARP32238 428 aa10.24□□□□□ -0.77
CTSA-209ENST00000493522 SORDQ00796 357 aa10.24□□□□□ -0.77
CTSA-209ENST00000493522 RPL18Q07020 188 aaKnown RBP10.24□□□□□ -0.77
CTSA-209ENST00000493522 FAM27E3Q08E93 113 aa10.24□□□□□ -0.77
CTSA-209ENST00000493522 SEC23BQ15437 767 aa10.24□□□□□ -0.77
CTSA-209ENST00000493522 MS4A18Q3C1V0 323 aa10.24□□□□□ -0.77
CTSA-209ENST00000493522 ASRGL1Q7L266 308 aa10.24□□□□□ -0.77
CTSA-209ENST00000493522 CDK20Q8IZL9 346 aa10.24□□□□□ -0.77
CTSA-209ENST00000493522 RNF113BQ8IZP6 322 aaKnown RBP10.24□□□□□ -0.77
CTSA-209ENST00000493522 ZIC4Q8N9L1 334 aa10.24□□□□□ -0.77
CTSA-209ENST00000493522 ANKK1Q8NFD2 765 aa10.24□□□□□ -0.77
CTSA-209ENST00000493522 OR4K5Q8NGD3 323 aa10.24□□□□□ -0.77
CTSA-209ENST00000493522 OR13C2Q8NGS9 318 aa10.24□□□□□ -0.77
CTSA-209ENST00000493522 CANT1Q8WVQ1 401 aa10.24□□□□□ -0.77
CTSA-209ENST00000493522 SLCO5A1Q9H2Y9 848 aa10.24□□□□□ -0.77
CTSA-209ENST00000493522 REEP1Q9H902 201 aa10.24□□□□□ -0.77
CTSA-209ENST00000493522 RASSF1Q9NS23 344 aa10.24□□□□□ -0.77
CTSA-209ENST00000493522 UPB1Q9UBR1 384 aa10.24□□□□□ -0.77
CTSA-209ENST00000493522 TMCC3Q9ULS5 477 aa10.24□□□□□ -0.77
CTSA-209ENST00000493522 NOX1Q9Y5S8 564 aa10.24□□□□□ -0.77
CTSA-209ENST00000493522 HRNRQ86YZ3 2850 aaPredicted RBP10.23□□□□□ -0.77
CTSA-209ENST00000493522 TRAV27A0A087WT01 109 aa10.23□□□□□ -0.77
CTSA-209ENST00000493522 TCRBV3S1A0A5B6 114 aa10.23□□□□□ -0.77
CTSA-209ENST00000493522 SH3PXD2BA1X283 911 aa10.23□□□□□ -0.77
CTSA-209ENST00000493522 HTR3EA5X5Y0 456 aa10.23□□□□□ -0.77
CTSA-209ENST00000493522 TNFRSF11BO00300 401 aa10.23□□□□□ -0.77
CTSA-209ENST00000493522 OR10H3O60404 316 aa10.23□□□□□ -0.77
CTSA-209ENST00000493522 KRT33AO76009 404 aa10.23□□□□□ -0.77
CTSA-209ENST00000493522 ADAP00813 363 aa10.23□□□□□ -0.77
CTSA-209ENST00000493522 HLA-DOBP13765 273 aa10.23□□□□□ -0.77
CTSA-209ENST00000493522 FOSL1P15407 271 aa10.23□□□□□ -0.77
CTSA-209ENST00000493522 MAKP20794 623 aa10.23□□□□□ -0.77
CTSA-209ENST00000493522 IL32P24001 234 aa10.23□□□□□ -0.77
CTSA-209ENST00000493522 NTF4P34130 210 aa10.23□□□□□ -0.77
CTSA-209ENST00000493522 AQP2P41181 271 aa10.23□□□□□ -0.77
CTSA-209ENST00000493522 SELENOPP49908 381 aa10.23□□□□□ -0.77
CTSA-209ENST00000493522 GABPB1Q06547 395 aaPredicted RBP10.23□□□□□ -0.77
CTSA-209ENST00000493522 FBXW9Q5XUX1 488 aa10.23□□□□□ -0.77
CTSA-209ENST00000493522 OR2T5Q6IEZ7 315 aa10.23□□□□□ -0.77
CTSA-209ENST00000493522 Q6ZT83 130 aa10.23□□□□□ -0.77
CTSA-209ENST00000493522 PXKQ7Z7A4 578 aa10.23□□□□□ -0.77
CTSA-209ENST00000493522 CXorf67Q86X51 503 aaPredicted RBP10.23□□□□□ -0.77
CTSA-209ENST00000493522 OR2T29Q8NH02 315 aa10.23□□□□□ -0.77
CTSA-209ENST00000493522 MOSPD2Q8NHP6 518 aa10.23□□□□□ -0.77
CTSA-209ENST00000493522 ALKBH3Q96Q83 286 aaPredicted RBP10.23□□□□□ -0.77
CTSA-209ENST00000493522 MED29Q9NX70 200 aa10.23□□□□□ -0.77
CTSA-209ENST00000493522 RCE1Q9Y256 329 aa10.23□□□□□ -0.77
CTSA-209ENST00000493522 PLEKHA6Q9Y2H5 1048 aa10.23□□□□□ -0.77
CTSA-209ENST00000493522 SAMHD1Q9Y3Z3 626 aaKnown RBP10.23□□□□□ -0.77
CTSA-209ENST00000493522 LYVE1Q9Y5Y7 322 aa10.23□□□□□ -0.77
CTSA-209ENST00000493522 ALPK2Q86TB3 2170 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 LOC102725191A0A1B0GVB3 256 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 A0A1W2PRG6 482 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 TUBAL3A6NHL2 446 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 MCIDASD6RGH6 385 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 C16orf97H3BN30 126 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 CLOCKO15516 846 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 FKBP6O75344 327 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 SLC43A1O75387 559 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 LYZL6O75951 148 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 KRT36O76013 467 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 F13BP05160 661 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 IFNGR1P15260 489 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 HOXB6P17509 224 aaKnown RBP10.22□□□□□ -0.77
CTSA-209ENST00000493522 UGT2B10P36537 528 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 SLC9A3P48764 834 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 BIDP55957 195 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 LGALS3BPQ08380 585 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 ZP4Q12836 540 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 FAPQ12884 760 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 TOP3AQ13472 1001 aaPredicted RBP10.22□□□□□ -0.77
CTSA-209ENST00000493522 MELKQ14680 651 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 TSC22D1Q15714 1073 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 TSPO2Q5TGU0 170 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 C9orf135Q5VTT2 229 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 CARD17Q5XLA6 110 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 SLC35D2Q76EJ3 337 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 OAFQ86UD1 273 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 GABRG1Q8N1C3 465 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 POMGNT2Q8NAT1 580 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 OR51A7Q8NH64 312 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 LINC01560Q8TB33 94 aa10.22□□□□□ -0.77
CTSA-209ENST00000493522 LIPHQ8WWY8 451 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms