RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 PRTFDC1Q9NRG1 225 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 OLAHQ9NV23 265 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 ARGLU1Q9NWB6 273 aaPredicted RBP2.53□□□□□ -2
PTCD3-218ENST00000493430 CD274Q9NZQ7 290 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 SPRR3Q9UBC9 169 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 RPS6KA6Q9UK32 745 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 ERVK-19Q9WJR5 959 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 FIS1Q9Y3D6 152 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 SAR1BQ9Y6B6 198 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 AP1M2Q9Y6Q5 423 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 C2CD3Q4AC94 2353 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 CELSR1Q9NYQ6 3014 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 KCNE1BA0A087WTH5 132 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 LOC102723996A0A087X1L8 192 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 IGKV3D-11A0A0A0MRZ8 115 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 NPIPA5A0A0B4J1W7 369 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 A0A1B0GTH9 108 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 A0A1W2PPM1 405 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 TRBC2A0A5B9 178 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 OR5H15A6NDH6 313 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 ANKRD61A6NGH8 418 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 SAGE2PA6NJ88 616 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 TRIM49D1C9J1S8 452 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 NPIPA7E9PJI5 369 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 CCL21O00585 134 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 PLPP1O14494 284 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 OR7A17O14581 309 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 NDC80O14777 642 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 RTL8CO15255 209 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 SSX4O60224 188 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 ERAL1O75616 437 aaKnown RBP2.52□□□□□ -2.01
PTCD3-218ENST00000493430 OR2J2O76002 312 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 OR4F21O95013 312 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 PGM3O95394 542 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 NSA2O95478 260 aaKnown RBP2.52□□□□□ -2.01
PTCD3-218ENST00000493430 AIFM1O95831 613 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 HPRP00739 348 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 RPN2P04844 631 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 SERPINA7P05543 415 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 C8GP07360 202 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 SLC35G6P0C7Q6 338 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 DUX4L4P0CJ87 422 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 NPIPA8P0DM63 369 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 SMIM10L1P0DMW3 83 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 IGHV4-31P0DP07 118 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 MLNP12872 115 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 CPMP14384 443 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 TCP1P17987 556 aaKnown RBP2.52□□□□□ -2.01
PTCD3-218ENST00000493430 KLK2P20151 261 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 CXCR2P25025 360 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 EEF1DP29692 281 aaKnown RBP2.52□□□□□ -2.01
PTCD3-218ENST00000493430 ATP5DP30049 168 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 CASQ1P31415 396 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 MAGEA4P43358 317 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 MAGEA5P43359 124 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 TSFMP43897 325 aaKnown RBP2.52□□□□□ -2.01
PTCD3-218ENST00000493430 SLCO1A2P46721 670 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 CCR8P51685 355 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 LIM2P55344 173 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 RPS15AP62244 130 aaKnown RBP2.52□□□□□ -2.01
PTCD3-218ENST00000493430 ASPHQ12797 758 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 MORF4L2Q15014 288 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 RASA2Q15283 850 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 TGFBIQ15582 683 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 NSDHLQ15738 373 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 ZKSCAN8Q15776 578 aaPredicted RBP2.52□□□□□ -2.01
PTCD3-218ENST00000493430 TTLL9Q3SXZ7 439 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 CMPK2Q5EBM0 449 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 AGAP7PQ5VUJ5 663 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 CES4AQ5XG92 561 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 GPR139Q6DWJ6 353 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 C8orf74Q6P047 294 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 TTC23LQ6PF05 361 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 IGFL2Q6UWQ7 119 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 RAPH1Q70E73 1250 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 IKBIPQ70UQ0 350 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 Q71RC1 249 aaPredicted RBP2.52□□□□□ -2.01
PTCD3-218ENST00000493430 NDUFAF7Q7L592 441 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 SZRD1Q7Z422 152 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 GOLGA7Q7Z5G4 137 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 LRRC6Q86X45 466 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 SIAH3Q8IW03 269 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 MCEMP1Q8IX19 187 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 C9orf40Q8IXQ3 194 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 PDIK1LQ8N165 341 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 ZADH2Q8N4Q0 377 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 TEX9Q8N6V9 391 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 APCDD1LQ8NCL9 501 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 OR5M1Q8NGP8 315 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 CLHC1Q8NHS4 586 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 RDH11Q8TC12 318 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 AGR3Q8TD06 166 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 AGAP11Q8TF27 550 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 GRK7Q8WTQ7 553 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 PYROXD1Q8WU10 500 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 MAIP1Q8WWC4 291 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 IFT81Q8WYA0 676 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 ATP6V1E2Q96A05 226 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 LRRC45Q96CN5 670 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms