RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 RAB39BQ96DA2 213 aa9.44□□□□□ -0.9
SND1-215ENST00000492772 MS4A3Q96HJ5 214 aa9.44□□□□□ -0.9
SND1-215ENST00000492772 SPATA9Q9BWV2 254 aa9.44□□□□□ -0.9
SND1-215ENST00000492772 ZNF665Q9H7R5 613 aa9.44□□□□□ -0.9
SND1-215ENST00000492772 B3GAT2Q9NPZ5 323 aa9.44□□□□□ -0.9
SND1-215ENST00000492772 LGALS13Q9UHV8 139 aa9.44□□□□□ -0.9
SND1-215ENST00000492772 LOC102725191A0A1B0GVB3 256 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 M0R082 166 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 M0R3G1 203 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 TMPRSS2O15393 492 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 TRAF3IP2O43734 574 aaPredicted RBP9.43□□□□□ -0.9
SND1-215ENST00000492772 SERPINE1P05121 402 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 BCHEP06276 602 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 CDKN2CP42773 168 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 PTDSS1P48651 473 aaKnown RBP9.43□□□□□ -0.9
SND1-215ENST00000492772 SEC24CP53992 1094 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 EGR4Q05215 589 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 MAD2L1BPQ15013 274 aaPredicted RBP9.43□□□□□ -0.9
SND1-215ENST00000492772 MAPK11Q15759 364 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 CHI3L2Q15782 390 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 C6orf89Q6UWU4 347 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 ZNF813Q6ZN06 617 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 C1orf229Q6ZS94 237 aaPredicted RBP9.43□□□□□ -0.9
SND1-215ENST00000492772 SERPINA11Q86U17 422 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 NUDCD3Q8IVD9 361 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 UEVLDQ8IX04 471 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 C20orf196Q8IYI0 205 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 ZNF417Q8TAU3 575 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.43□□□□□ -0.9
SND1-215ENST00000492772 SLC38A4Q969I6 547 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 KTI12Q96EK9 354 aaPredicted RBP9.43□□□□□ -0.9
SND1-215ENST00000492772 LRR1Q96L50 414 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 OR52E6Q96RD3 313 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 ZNF587Q96SQ5 575 aaPredicted RBP9.43□□□□□ -0.9
SND1-215ENST00000492772 SLC6A7Q99884 636 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 ZNF747Q9BV97 191 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 TMPRSS13Q9BYE2 586 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 C12orf10Q9HB07 376 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 THUMPD1Q9NXG2 353 aaKnown RBP9.43□□□□□ -0.9
SND1-215ENST00000492772 RPS6KB2Q9UBS0 482 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 SEC14L4Q9UDX3 406 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 SLC7A8Q9UHI5 535 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 GPR160Q9UJ42 338 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 ZNF232Q9UNY5 417 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.43□□□□□ -0.9
SND1-215ENST00000492772 RAP2CQ9Y3L5 183 aa9.43□□□□□ -0.9
SND1-215ENST00000492772 A0A0G2JPF8 293 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 TMEM247A6NEH6 219 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 HNRNPCL2B2RXH8 293 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 HNRNPCL3B7ZW38 293 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 RFXANKO14593 260 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 ITM2AO43736 263 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 HNRNPCL1O60812 293 aaKnown RBP9.42□□□□□ -0.9
SND1-215ENST00000492772 UBL3O95164 117 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 MPZL1O95297 269 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 HNRNPCL4P0DMR1 293 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 NAT2P11245 290 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 B4GALT1P15291 398 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 GATA3P23771 443 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 GRPRP30550 384 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 ETV4P43268 484 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 RPL14P50914 215 aaKnown RBP9.42□□□□□ -0.9
SND1-215ENST00000492772 DSTNP60981 165 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 ABCE1P61221 599 aaKnown RBP9.42□□□□□ -0.9
SND1-215ENST00000492772 UBA52P62987 128 aaKnown RBP9.42□□□□□ -0.9
SND1-215ENST00000492772 FOXL1Q12952 345 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 MFSD13AQ14CX5 517 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 NKPD1Q17RQ9 610 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 PCGF3Q3KNV8 242 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 GLIPR1L2Q4G1C9 344 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 PDLIM3Q53GG5 364 aaPredicted RBP9.42□□□□□ -0.9
SND1-215ENST00000492772 PHYHD1Q5SRE7 291 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 OGFOD2Q6N063 350 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 H1FNTQ75WM6 255 aaPredicted RBP9.42□□□□□ -0.9
SND1-215ENST00000492772 NET1Q7Z628 596 aaPredicted RBP9.42□□□□□ -0.9
SND1-215ENST00000492772 LRP11Q86VZ4 500 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 CLIP4Q8N3C7 705 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 NANPQ8TBE9 248 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 SLC38A5Q8WUX1 472 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 SNX33Q8WV41 574 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 ZNF75AQ96N20 296 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 ZBTB18Q99592 522 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 NTN4Q9HB63 628 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 MYEF2Q9P2K5 600 aaKnown RBP9.42□□□□□ -0.9
SND1-215ENST00000492772 DUSP13Q9UII6 198 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 FZR1Q9UM11 496 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 POFUT2Q9Y2G5 429 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 IFT52Q9Y366 437 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 PCDHGB1Q9Y5G3 927 aa9.42□□□□□ -0.9
SND1-215ENST00000492772 TRAV36DV7A0A075B6V5 113 aa9.41□□□□□ -0.9
SND1-215ENST00000492772 SLC22A23A1A5C7 686 aa9.41□□□□□ -0.9
SND1-215ENST00000492772 PLPP2O43688 288 aa9.41□□□□□ -0.9
SND1-215ENST00000492772 TYROBPO43914 113 aa9.41□□□□□ -0.9
SND1-215ENST00000492772 ENTPD5O75356 428 aa9.41□□□□□ -0.9
SND1-215ENST00000492772 AVPP01185 164 aa9.41□□□□□ -0.9
SND1-215ENST00000492772 ETFAP13804 333 aa9.41□□□□□ -0.9
SND1-215ENST00000492772 NQO1P15559 274 aaKnown RBP9.41□□□□□ -0.9
SND1-215ENST00000492772 FPR2P25090 351 aa9.41□□□□□ -0.9
SND1-215ENST00000492772 CRATP43155 626 aa9.41□□□□□ -0.9
SND1-215ENST00000492772 GIPRP48546 466 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms