RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 LINC01387J3KSC0 135 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 FADS1O60427 444 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 ZNF254O75437 659 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 IGHV4-39P01824 125 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 FGF4P08620 206 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 MYL9P24844 172 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 GTF2E2P29084 291 aaKnown RBP11.69□□□□□ -0.54
HDAC3-213ENST00000492506 CDKN1AP38936 164 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 POU6F2P78424 691 aaPredicted RBP11.69□□□□□ -0.54
HDAC3-213ENST00000492506 IL5RAQ01344 420 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 FLI1Q01543 452 aaPredicted RBP11.69□□□□□ -0.54
HDAC3-213ENST00000492506 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.69□□□□□ -0.54
HDAC3-213ENST00000492506 TMEM44Q2T9K0 475 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 KRTAP24-1Q3LI83 254 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 PXDC1Q5TGL8 231 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 RAET1LQ5VY80 246 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 FRG2Q64ET8 278 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 BLOC1S3Q6QNY0 202 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 COMMD6Q7Z4G1 85 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 GGNQ86UU5 652 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 FUNDC1Q8IVP5 155 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 GDPD1Q8N9F7 314 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 OR5T2Q8NGG2 359 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 OR6K3Q8NGY3 331 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 L3HYPDHQ96EM0 354 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 PPP1R36Q96LQ0 422 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 DMRTB1Q96MA1 342 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 GPR78Q96P69 363 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 FRG2BQ96QU4 278 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 ACTR6Q9GZN1 396 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 RNF121Q9H920 327 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 NTN4Q9HB63 628 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 PLCXD1Q9NUJ7 323 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 AHSPQ9NZD4 102 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 ZIM2Q9NZV7 527 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 MED11Q9P086 117 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 PPP4R1LQ9P1A2 415 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 EGFL7Q9UHF1 273 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 MAGED1Q9Y5V3 778 aaPredicted RBP11.69□□□□□ -0.54
HDAC3-213ENST00000492506 PLCE1Q9P212 2302 aa11.69□□□□□ -0.54
HDAC3-213ENST00000492506 MALRD1Q5VYJ5 2156 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 A0A096LNT2 108 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 PTGES3LE9PB15 166 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 H3BML4 177 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 GNGT2O14610 69 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 GPRIN2O60269 458 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 FAM20BO75063 409 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 SS18L1O75177 396 aaPredicted RBP11.68□□□□□ -0.54
HDAC3-213ENST00000492506 NDUFS7O75251 213 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 CYP7B1O75881 506 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 IFNA7P01567 189 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 MT-ND2P03891 347 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 SBK3P0C264 359 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 FAM157CP0CG43 387 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 RAB3AP20336 220 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 EVI2BP34910 448 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 KRT20P35900 424 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 ARHGDIAP52565 204 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 GNA13Q14344 377 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 GANABQ14697 944 aaKnown RBP11.68□□□□□ -0.54
HDAC3-213ENST00000492506 CLLU1Q5K131 121 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 GLYATQ6IB77 296 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 MZT2BQ6NZ67 158 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 SLC46A3Q7Z3Q1 461 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 DPP10Q8N608 796 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 OR8J3Q8NGG0 315 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 NEUROG1Q92886 237 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 UFD1Q92890 307 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 TRMT61AQ96FX7 289 aaKnown RBP11.68□□□□□ -0.54
HDAC3-213ENST00000492506 RADILQ96JH8 1075 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 SIGLEC11Q96RL6 698 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 NTMT1Q9BV86 223 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 SPATA9Q9BWV2 254 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 CDADC1Q9BWV3 514 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 AMBRA1Q9C0C7 1298 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 OR10A4Q9H209 315 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 FLRT3Q9NZU0 649 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 ERVK-18Q9QC07 812 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 ELF5Q9UKW6 265 aaPredicted RBP11.68□□□□□ -0.54
HDAC3-213ENST00000492506 TBC1D24Q9ULP9 559 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 CLEC4AQ9UMR7 237 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 LIPT1Q9Y234 373 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 PRELID3BQ9Y3B1 194 aa11.68□□□□□ -0.54
HDAC3-213ENST00000492506 EFCAB10A6NFE3 127 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 I3L521 148 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 ADAM11O75078 769 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 B3GALNT1O75752 331 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 FCGR2AP12318 317 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 PSMB1P20618 241 aaKnown RBP11.67□□□□□ -0.54
HDAC3-213ENST00000492506 PTBP1P26599 531 aaKnown RBP eCLIP11.67□□□□□ -0.54
HDAC3-213ENST00000492506 IL12BP29460 328 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 ALDH9A1P49189 494 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 GBX2P52951 348 aaPredicted RBP11.67□□□□□ -0.54
HDAC3-213ENST00000492506 RAB14P61106 215 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 PSPHP78330 225 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 PSG6Q00889 435 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 RUNDC3AQ59EK9 446 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 FAM219BQ5XKK7 198 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 TYW3Q6IPR3 259 aaKnown RBP11.67□□□□□ -0.54
HDAC3-213ENST00000492506 TBPL2Q6SJ96 375 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms