RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	TRAV36DV7	A0A075B6V5	113 aa		13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	hCG_2039718	K7EN88	272 aa		13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	CELA3B	P08861	270 aa		13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	ARAF	P10398	606 aa		13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	PPIB	P23284	216 aa	Known RBP	13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	GRPR	P30550	384 aa		13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	THBS2	P35442	1172 aa		13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	ARR3	P36575	388 aa		13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	CAPZA2	P47755	286 aa		13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	NPRL3	Q12980	569 aa		13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	MFSD13A	Q14CX5	517 aa		13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	CEACAM16	Q2WEN9	425 aa		13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	DHRS4L2	Q6PKH6	230 aa		13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	H1FNT	Q75WM6	255 aa	Predicted RBP	13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	NET1	Q7Z628	596 aa	Predicted RBP	13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	ARIH2OS	Q8N7S6	290 aa		13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	ADPRHL1	Q8NDY3	354 aa		13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	NFKBID	Q8NI38	313 aa		13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	TAAR8	Q969N4	342 aa		13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	MSI2	Q96DH6	328 aa	Known RBP	13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	ANKRD27	Q96NW4	1050 aa		13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	BPESC1	Q9GZL8	116 aa		13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	CRLF2	Q9HC73	371 aa		13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	SELENON	Q9NZV5	590 aa		13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	VAPA	Q9P0L0	249 aa		13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	TES	Q9UGI8	421 aa	Known RBP	13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	LEF1	Q9UJU2	399 aa	Predicted RBP	13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	USP22	Q9UPT9	525 aa		13.3	□□□□□ -0.28
MRPL55-231	ENST00000492170	IGHV2OR16-5	A0A0B4J2B6	119 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	LOC102725191	A0A1B0GVB3	256 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	TRAF3IP2	O43734	574 aa	Predicted RBP	13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	NQO1	P15559	274 aa	Known RBP	13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	ZNF23	P17027	643 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	NPR2	P20594	1047 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	HTR2A	P28223	471 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	LSP1	P33241	339 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	THBS4	P35443	961 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	HGFAC	Q04756	655 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	FAM91A1	Q658Y4	838 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	REEP3	Q6NUK4	255 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	DLEU7	Q6UYE1	221 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	SPATA21	Q7Z572	469 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	MDP1	Q86V88	176 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	MYPOP	Q86VE0	399 aa	Predicted RBP	13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	RETREG3	Q86VR2	466 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	UEVLD	Q8IX04	471 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	SVOPL	Q8N434	492 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	IL17RD	Q8NFM7	739 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	RNF217	Q8TC41	542 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	NEU4	Q8WWR8	484 aa	Predicted RBP	13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	OR2M2	Q96R28	347 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	EPYC	Q99645	322 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	DYNLRB1	Q9NP97	96 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	SLC13A4	Q9UKG4	626 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	NDUFAF1	Q9Y375	327 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	CORIN	Q9Y5Q5	1042 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	MALRD1	Q5VYJ5	2156 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	SVEP1	Q4LDE5	3571 aa		13.29	□□□□□ -0.28
MRPL55-231	ENST00000492170	IGKV1D-42	A0A075B6H8	117 aa		13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	SLC35F4	A4IF30	521 aa		13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	PRORSD1P	A6NEY8	169 aa		13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	ZNF99	A8MXY4	864 aa	Predicted RBP	13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170		M0R3G1	203 aa		13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	SLC22A2	O15244	555 aa		13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	SEC14L2	O76054	403 aa		13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	DAO	P14920	347 aa		13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	CBL	P22681	906 aa		13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	SEC24C	P53992	1094 aa		13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	GYS2	P54840	703 aa		13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	RGS8	P57771	180 aa	Predicted RBP	13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	CDK6	Q00534	326 aa		13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	KLF10	Q13118	480 aa		13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	FAM120AOS	Q5T036	256 aa		13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	ULK3	Q6PHR2	472 aa		13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	IL17REL	Q6ZVW7	336 aa		13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	TMEM123	Q8N131	208 aa		13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	OR6S1	Q8NH40	331 aa		13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	ZNF837	Q96EG3	531 aa	Predicted RBP	13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	SLC47A1	Q96FL8	570 aa		13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	ASPN	Q9BXN1	380 aa		13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	IKZF5	Q9H5V7	419 aa		13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	TMEM27	Q9HBJ8	222 aa		13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	B3GAT2	Q9NPZ5	323 aa		13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	FAM53C	Q9NYF3	392 aa		13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	CORO2B	Q9UQ03	480 aa		13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	ANK2	Q01484	3957 aa		13.28	□□□□□ -0.28
MRPL55-231	ENST00000492170	ZNF503-AS2	A6NEH8	195 aa		13.27	□□□□□ -0.29
MRPL55-231	ENST00000492170	FBP2	O00757	339 aa		13.27	□□□□□ -0.29
MRPL55-231	ENST00000492170	ANGPT2	O15123	496 aa		13.27	□□□□□ -0.29
MRPL55-231	ENST00000492170	STAMBP	O95630	424 aa		13.27	□□□□□ -0.29
MRPL55-231	ENST00000492170	TGFA	P01135	160 aa		13.27	□□□□□ -0.29
MRPL55-231	ENST00000492170	GPX2	P18283	190 aa		13.27	□□□□□ -0.29
MRPL55-231	ENST00000492170	DRD4	P21917	467 aa		13.27	□□□□□ -0.29
MRPL55-231	ENST00000492170	POU3F1	Q03052	451 aa	Predicted RBP	13.27	□□□□□ -0.29
MRPL55-231	ENST00000492170	SNTB2	Q13425	540 aa	Known RBP	13.27	□□□□□ -0.29
MRPL55-231	ENST00000492170	DAG1	Q14118	895 aa		13.27	□□□□□ -0.29
MRPL55-231	ENST00000492170	KRTAP24-1	Q3LI83	254 aa		13.27	□□□□□ -0.29
MRPL55-231	ENST00000492170	COQ5	Q5HYK3	327 aa		13.27	□□□□□ -0.29
MRPL55-231	ENST00000492170	CARD17	Q5XLA6	110 aa		13.27	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms