RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 RUNX1T1Q06455 604 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 LOXL1Q08397 574 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-211ENST00000491581 FADDQ13158 208 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 C1DQ13901 141 aaKnown RBP7.7□□□□□ -1.18
HDAC3-211ENST00000491581 MFSD13AQ14CX5 517 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 KRTAP24-1Q3LI83 254 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 RABL3Q5HYI8 236 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 FAM69AQ5T7M9 428 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 REEP3Q6NUK4 255 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 ZNF544Q6NX49 715 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 DHRS4L2Q6PKH6 230 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 THSD4Q6ZMP0 1018 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 SPATA21Q7Z572 469 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 KIRREL3Q8IZU9 778 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 GPR137CQ8N3F9 429 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 PAQR4Q8N4S7 273 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-211ENST00000491581 LSMEM1Q8N8F7 131 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 GTF3AQ92664 365 aaKnown RBP7.7□□□□□ -1.18
HDAC3-211ENST00000491581 SLC38A4Q969I6 547 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 TAMM41Q96BW9 452 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 ZNF75AQ96N20 296 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 TSPAN32Q96QS1 320 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 MCHR1Q99705 422 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 SYT3Q9BQG1 590 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 REPIN1Q9BWE0 567 aaKnown RBP7.7□□□□□ -1.18
HDAC3-211ENST00000491581 LINC00470Q9BZP3 86 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 BPESC1Q9GZL8 116 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 NARFLQ9H6Q4 476 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 BARX1Q9HBU1 254 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-211ENST00000491581 CRNNQ9UBG3 495 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-211ENST00000491581 HIVEP2P31629 2446 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 ARPC4-TTLL3A0A0A6YYG9 625 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 TMEM247A6NEH6 219 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 M0QX08 132 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 AIM2O14862 343 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 TLX2O43763 284 aaPredicted RBP7.69□□□□□ -1.18
HDAC3-211ENST00000491581 SLC43A1O75387 559 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 CH25HO95992 272 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 IGKV3-15P01624 115 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 CRYAAP02489 173 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 ADRA2AP08913 450 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 ETS2P15036 469 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 CD247P20963 164 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 USF1P22415 310 aaPredicted RBP7.69□□□□□ -1.18
HDAC3-211ENST00000491581 AHCYP23526 432 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 ALDH3B1P43353 468 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 NR4A2P43354 598 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 MRPL19P49406 292 aaKnown RBP7.69□□□□□ -1.18
HDAC3-211ENST00000491581 GZMMP51124 257 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 BIDP55957 195 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 PCBP3P57721 371 aaKnown RBP7.69□□□□□ -1.18
HDAC3-211ENST00000491581 ERVS71-1P61550 626 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 TXNL4AP83876 142 aaKnown RBP7.69□□□□□ -1.18
HDAC3-211ENST00000491581 VLDLRP98155 873 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 PMS2P3Q13401 168 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 SNTB2Q13425 540 aaKnown RBP7.69□□□□□ -1.18
HDAC3-211ENST00000491581 CCNIQ14094 377 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 SQLEQ14534 574 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 CHRFAM7AQ494W8 412 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 ENTPD8Q5MY95 495 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 CGB2Q6NT52 195 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 H1FNTQ75WM6 255 aaPredicted RBP7.69□□□□□ -1.18
HDAC3-211ENST00000491581 DHDDSQ86SQ9 333 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 CROCCP2Q86T23 111 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 ARMC8Q8IUR7 673 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 ZNF584Q8IVC4 421 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 UEVLDQ8IX04 471 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 C20orf196Q8IYI0 205 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 PFN4Q8NHR9 129 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 DYDC1Q8WWB3 177 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 C1orf159Q96HA4 380 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 ANKRD27Q96NW4 1050 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 DOK1Q99704 481 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 ARHGDIGQ99819 225 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 SH3GL3Q99963 347 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 PRSS27Q9BQR3 290 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 CCDC28BQ9BUN5 200 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 KATNB1Q9BVA0 655 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 MRPL37Q9BZE1 423 aaKnown RBP7.69□□□□□ -1.18
HDAC3-211ENST00000491581 B3GNT2Q9NY97 397 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 SLC7A7Q9UM01 511 aa7.69□□□□□ -1.18
HDAC3-211ENST00000491581 ZNF99A8MXY4 864 aaPredicted RBP7.68□□□□□ -1.18
HDAC3-211ENST00000491581 RPL36A-HNRNPH2H7BZ11 118 aa7.68□□□□□ -1.18
HDAC3-211ENST00000491581 PLPP3O14495 311 aa7.68□□□□□ -1.18
HDAC3-211ENST00000491581 PIP5K1CO60331 668 aa7.68□□□□□ -1.18
HDAC3-211ENST00000491581 FZD7O75084 574 aa7.68□□□□□ -1.18
HDAC3-211ENST00000491581 ERLIN1O75477 346 aa7.68□□□□□ -1.18
HDAC3-211ENST00000491581 VAMP5O95183 116 aa7.68□□□□□ -1.18
HDAC3-211ENST00000491581 ADORA3P0DMS8 318 aa7.68□□□□□ -1.18
HDAC3-211ENST00000491581 IFNGR1P15260 489 aa7.68□□□□□ -1.18
HDAC3-211ENST00000491581 CBR1P16152 277 aa7.68□□□□□ -1.18
HDAC3-211ENST00000491581 ZNF14P17017 642 aaPredicted RBP7.68□□□□□ -1.18
HDAC3-211ENST00000491581 SLC6A2P23975 617 aa7.68□□□□□ -1.18
HDAC3-211ENST00000491581 OR1E2P47887 323 aa7.68□□□□□ -1.18
HDAC3-211ENST00000491581 GIPRP48546 466 aa7.68□□□□□ -1.18
HDAC3-211ENST00000491581 PTDSS1P48651 473 aaKnown RBP7.68□□□□□ -1.18
HDAC3-211ENST00000491581 MAP2K6P52564 334 aa7.68□□□□□ -1.18
HDAC3-211ENST00000491581 NCALDP61601 193 aa7.68□□□□□ -1.18
HDAC3-211ENST00000491581 SNRPD2P62316 118 aaKnown RBP7.68□□□□□ -1.18
HDAC3-211ENST00000491581 CHRNB3Q05901 458 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms