RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 PIAS4Q8N2W9 510 aaPredicted RBP6.7□□□□□ -1.34
NPHP3-208ENST00000490993 URM1Q9BTM9 101 aaKnown RBP6.7□□□□□ -1.34
NPHP3-208ENST00000490993 ALKBH4Q9NXW9 302 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 ZNF346Q9UL40 294 aaKnown RBP6.7□□□□□ -1.34
NPHP3-208ENST00000490993 ATXN7L1Q9ULK2 861 aaPredicted RBP6.7□□□□□ -1.34
NPHP3-208ENST00000490993 PLXNA4Q9HCM2 1894 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 ZC3H12DA2A288 527 aaKnown RBP6.7□□□□□ -1.34
NPHP3-208ENST00000490993 FOLR1P15328 257 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 ADH7P40394 386 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 ZNF136P52737 540 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 CRYBA2P53672 197 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 ARL6IP1Q15041 203 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 C4orf46Q504U0 113 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 LAIR2Q6ISS4 152 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 PM20D2Q8IYS1 436 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 OR4C3Q8NH37 302 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 OR14L1PQ8NHC6 308 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 MRGPRX4Q96LA9 322 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 CMTM3Q96MX0 182 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 HIST1H2AAQ96QV6 131 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 VN1R1Q9GZP7 353 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 MMP28Q9H239 520 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 TXNIPQ9H3M7 391 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 ZNF768Q9H5H4 540 aaKnown RBP6.7□□□□□ -1.34
NPHP3-208ENST00000490993 OCEL1Q9H607 264 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 CHST11Q9NPF2 352 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 ADAM18Q9Y3Q7 739 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 MYO9BQ13459 2157 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 LTBP2Q14767 1821 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 CDC42EP2O14613 210 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 PLPP2O43688 288 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 ATP6V1G1O75348 118 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 ZNF254O75437 659 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 MTRF1O75570 445 aaKnown RBP6.7□□□□□ -1.34
NPHP3-208ENST00000490993 TP53P04637 393 aaPredicted RBP6.7□□□□□ -1.34
NPHP3-208ENST00000490993 CYC1P08574 325 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 CALCBP10092 127 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 GTF2F2P13984 249 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 CSNK1A1P48729 337 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 GNG2P59768 71 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 TSPAN5P62079 268 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 CCL7P80098 99 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 IL11RAQ14626 422 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 HLA-BQ31612 363 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 RHBDD2Q6NTF9 364 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 SLC35D2Q76EJ3 337 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 DPY19L4Q7Z388 723 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 ZNF584Q8IVC4 421 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 GPR137CQ8N3F9 429 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 ZNF511Q8NB15 262 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 GINS4Q9BRT9 223 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 SLC25A18Q9H1K4 315 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 MMP25Q9NPA2 562 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 NOX4Q9NPH5 578 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 SLC43A1O75387 559 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 KDM4BO94953 1096 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 NPR2P20594 1047 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 S100GP29377 79 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 PRSS3P35030 304 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 CASP3P42574 277 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 OR3A3P47888 321 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 OR3A2P47893 321 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 TFF2Q03403 129 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 OR5M10Q6IEU7 315 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 C3orf33Q6P1S2 294 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 TSEN54Q7Z6J9 526 aaKnown RBP6.7□□□□□ -1.34
NPHP3-208ENST00000490993 TMEM52Q8NDY8 209 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 OR1J4Q8NGS1 313 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 ZNF431Q8TF32 576 aaPredicted RBP6.7□□□□□ -1.34
NPHP3-208ENST00000490993 HOXB13Q92826 284 aaPredicted RBP6.7□□□□□ -1.34
NPHP3-208ENST00000490993 SPTSSAQ969W0 71 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 HYLS1Q96M11 299 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 OR14A2Q96R54 314 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 MCCC2Q9HCC0 563 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 A0A087WZY1 265 aa6.69□□□□□ -1.34
NPHP3-208ENST00000490993 TMEM269A0A1B0GVZ9 245 aa6.69□□□□□ -1.34
NPHP3-208ENST00000490993 H7C1C5 153 aa6.69□□□□□ -1.34
NPHP3-208ENST00000490993 RAB3AP20336 220 aa6.69□□□□□ -1.34
NPHP3-208ENST00000490993 SFTPDP35247 375 aa6.69□□□□□ -1.34
NPHP3-208ENST00000490993 TGM4P49221 684 aa6.69□□□□□ -1.34
NPHP3-208ENST00000490993 EVX1P49640 407 aa6.69□□□□□ -1.34
NPHP3-208ENST00000490993 LCN6P62502 163 aa6.69□□□□□ -1.34
NPHP3-208ENST00000490993 IGLV3-21P80748 117 aaPredicted RBP6.69□□□□□ -1.34
NPHP3-208ENST00000490993 ARFRP1Q13795 201 aa6.69□□□□□ -1.34
NPHP3-208ENST00000490993 ABHD17BQ5VST6 288 aa6.69□□□□□ -1.34
NPHP3-208ENST00000490993 OR5D14Q8NGL3 314 aa6.69□□□□□ -1.34
NPHP3-208ENST00000490993 CTHRC1Q96CG8 243 aa6.69□□□□□ -1.34
NPHP3-208ENST00000490993 JAM3Q9BX67 310 aa6.69□□□□□ -1.34
NPHP3-208ENST00000490993 C1orf198Q9H425 327 aa6.69□□□□□ -1.34
NPHP3-208ENST00000490993 MED11Q9P086 117 aa6.69□□□□□ -1.34
NPHP3-208ENST00000490993 RBMX2Q9Y388 322 aaKnown RBP6.69□□□□□ -1.34
NPHP3-208ENST00000490993 DOCK6Q96HP0 2047 aa6.69□□□□□ -1.34
NPHP3-208ENST00000490993 ARPC4-TTLL3A0A0A6YYG9 625 aa6.69□□□□□ -1.34
NPHP3-208ENST00000490993 ITGA5P08648 1049 aa6.69□□□□□ -1.34
NPHP3-208ENST00000490993 UBCP0CG48 685 aaKnown RBP6.69□□□□□ -1.34
NPHP3-208ENST00000490993 APEX1P27695 318 aaKnown RBP6.69□□□□□ -1.34
NPHP3-208ENST00000490993 METTL11BQ5VVY1 283 aa6.69□□□□□ -1.34
NPHP3-208ENST00000490993 TMEM205Q6UW68 189 aa6.69□□□□□ -1.34
NPHP3-208ENST00000490993 IL20RBQ6UXL0 311 aa6.69□□□□□ -1.34
NPHP3-208ENST00000490993 DEFB123Q8N688 67 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms