RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 ZNF234Q14588 700 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 MELKQ14680 651 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 ALG11Q2TAA5 492 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 HNRNPA1L2Q32P51 320 aaKnown RBP9.34□□□□□ -0.91
BRD9-209ENST00000490814 DEFB134Q4QY38 66 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 LBHQ53QV2 105 aaPredicted RBP9.34□□□□□ -0.91
BRD9-209ENST00000490814 SLC25A30Q5SVS4 291 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 PTCRAQ6ISU1 281 aaPredicted RBP9.34□□□□□ -0.91
BRD9-209ENST00000490814 ZC3H14Q6PJT7 736 aaKnown RBP9.34□□□□□ -0.91
BRD9-209ENST00000490814 CD300LDQ6UXZ3 194 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 POMGNT2Q8NAT1 580 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 POGLUT1Q8NBL1 392 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 PXT1Q8NFP0 134 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 FGF13Q92913 245 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 TMEM138Q9NPI0 162 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 CA10Q9NS85 328 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 MRPS18AQ9NVS2 196 aaKnown RBP9.34□□□□□ -0.91
BRD9-209ENST00000490814 AKAP7Q9P0M2 348 aaPredicted RBP9.34□□□□□ -0.91
BRD9-209ENST00000490814 A0A0A6YYD5 115 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 CENPVL1A0A0U1RR11 272 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 TSPAN11A1L157 253 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 UNC119BA6NIH7 251 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 CLEC3AO75596 197 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 SLC34A2O95436 690 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 HPP00738 406 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 UCHL1P09936 223 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 TEAD1P28347 426 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 P2RY2P41231 377 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 RAB28P51157 221 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 UBE2MP61081 183 aaKnown RBP9.34□□□□□ -0.91
BRD9-209ENST00000490814 ZNF77Q15935 545 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 ARHGAP11AQ6P4F7 1023 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 GJD3Q8N144 294 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 C17orf47Q8NEP4 570 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 KCTD12Q96CX2 325 aaKnown RBP9.34□□□□□ -0.91
BRD9-209ENST00000490814 MISP3Q96FF7 219 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 SLC35A4Q96G79 324 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 TMPRSS5Q9H3S3 457 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 FN3KQ9H479 309 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 UBE2ZQ9H832 354 aaPredicted RBP9.34□□□□□ -0.91
BRD9-209ENST00000490814 NOX3Q9HBY0 568 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 BCL2L10Q9HD36 194 aa9.34□□□□□ -0.91
BRD9-209ENST00000490814 MBNL1Q9NR56 388 aaKnown RBP9.34□□□□□ -0.91
BRD9-209ENST00000490814 TRPM6Q9BX84 2022 aa9.34□□□□□ -0.92
BRD9-209ENST00000490814 EDDM13A0A1B0GTR0 161 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 RIIAD1A6NNX1 92 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 C1QTNF3-AMACRE9PGA6 284 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 NARSO43776 548 aaKnown RBP9.33□□□□□ -0.92
BRD9-209ENST00000490814 IL9P15248 144 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 ITGA3P26006 1051 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 S100A11P31949 105 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 HLXQ14774 488 aaPredicted RBP9.33□□□□□ -0.92
BRD9-209ENST00000490814 B3GNTL1Q67FW5 361 aaPredicted RBP9.33□□□□□ -0.92
BRD9-209ENST00000490814 FAM111BQ6SJ93 734 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 C16orf54Q6UWD8 224 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 SEZ6L2Q6UXD5 910 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 ARL14Q8N4G2 192 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 FAM98AQ8NCA5 519 aaKnown RBP9.33□□□□□ -0.92
BRD9-209ENST00000490814 ZNF485Q8NCK3 441 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 OR2L5Q8NG80 312 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 OR2A1Q8NGT9 310 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 OR5J2Q8NH18 312 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 OR4C6Q8NH72 309 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 MS4A6EQ96DS6 147 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 MRPL37Q9BZE1 423 aaKnown RBP9.33□□□□□ -0.92
BRD9-209ENST00000490814 C20orf141Q9NUB4 165 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 CALML5Q9NZT1 146 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 METTL1Q9UBP6 276 aaKnown RBP9.33□□□□□ -0.92
BRD9-209ENST00000490814 HEATR5BQ9P2D3 2071 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 COL4A6Q14031 1691 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 A0A1W2PPV9 198 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 MCRIP1C9JLW8 97 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 SMAD9O15198 467 aaKnown RBP9.33□□□□□ -0.92
BRD9-209ENST00000490814 PPP1R3DO95685 299 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 ATF1P18846 271 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 GRPRP30550 384 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 CALCRP30988 508 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 THBS2P35442 1172 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 EPHA4P54764 986 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 GUCA2BQ16661 112 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 METRNLQ641Q3 311 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 ABHD17CQ6PCB6 329 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 LILRA6Q6PI73 481 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 SSX6Q7RTT6 188 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.33□□□□□ -0.92
BRD9-209ENST00000490814 RNF113BQ8IZP6 322 aaKnown RBP9.33□□□□□ -0.92
BRD9-209ENST00000490814 OR52B4Q8NGK2 314 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 OR10G6Q8NH81 332 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 ZMYND19Q96E35 227 aaPredicted RBP9.33□□□□□ -0.92
BRD9-209ENST00000490814 ACTRT3Q9BYD9 372 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 SLC6A20Q9NP91 592 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 DUSP22Q9NRW4 184 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 IGKV1-8A0A0C4DH67 115 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 CXorf65A6NEN9 183 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 SLC31A1O15431 190 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 FLRT2O43155 660 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 CREBL2O60519 120 aaPredicted RBP9.33□□□□□ -0.92
BRD9-209ENST00000490814 MOSPD3O75425 235 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 MANEAQ5SRI9 462 aa9.33□□□□□ -0.92
BRD9-209ENST00000490814 SAPCD1Q5SSQ6 148 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms