RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 TUBA1AQ71U36 451 aa17.25■□□□□ 0.35
SMC4-222ENST00000490207 ARPINQ7Z6K5 226 aa17.25■□□□□ 0.35
SMC4-222ENST00000490207 MICU2Q8IYU8 434 aa17.25■□□□□ 0.35
SMC4-222ENST00000490207 FBXL14Q8N1E6 418 aa17.25■□□□□ 0.35
SMC4-222ENST00000490207 SLC38A2Q96QD8 506 aa17.25■□□□□ 0.35
SMC4-222ENST00000490207 EMC6Q9BV81 110 aa17.25■□□□□ 0.35
SMC4-222ENST00000490207 GRIP2Q9C0E4 1043 aa17.25■□□□□ 0.35
SMC4-222ENST00000490207 MED29Q9NX70 200 aa17.25■□□□□ 0.35
SMC4-222ENST00000490207 ATP23Q9Y6H3 246 aa17.25■□□□□ 0.35
SMC4-222ENST00000490207 NF1P21359 2839 aa17.24■□□□□ 0.35
SMC4-222ENST00000490207 IGHV1-18A0A0C4DH31 117 aa17.24■□□□□ 0.35
SMC4-222ENST00000490207 C11orf98E9PRG8 122 aa17.24■□□□□ 0.35
SMC4-222ENST00000490207 ATP6V1G2-DDX39BF2Z307 99 aa17.24■□□□□ 0.35
SMC4-222ENST00000490207 M0R3G1 203 aa17.24■□□□□ 0.35
SMC4-222ENST00000490207 SMAD7O15105 426 aaKnown RBP17.24■□□□□ 0.35
SMC4-222ENST00000490207 OR6A2O95222 327 aa17.24■□□□□ 0.35
SMC4-222ENST00000490207 CH25HO95992 272 aa17.24■□□□□ 0.35
SMC4-222ENST00000490207 ADORA3P0DMS8 318 aa17.24■□□□□ 0.35
SMC4-222ENST00000490207 PAX7P23759 505 aa17.24■□□□□ 0.35
SMC4-222ENST00000490207 FABP6P51161 128 aa17.24■□□□□ 0.35
SMC4-222ENST00000490207 TAS2R41P59536 307 aa17.24■□□□□ 0.35
SMC4-222ENST00000490207 ARF1P84077 181 aaKnown RBP17.24■□□□□ 0.35
SMC4-222ENST00000490207 ETFDHQ16134 617 aa17.24■□□□□ 0.35
SMC4-222ENST00000490207 ZNF544Q6NX49 715 aa17.24■□□□□ 0.35
SMC4-222ENST00000490207 CLEC9AQ6UXN8 241 aa17.24■□□□□ 0.35
SMC4-222ENST00000490207 PXKQ7Z7A4 578 aa17.24■□□□□ 0.35
SMC4-222ENST00000490207 PRSS27Q9BQR3 290 aa17.24■□□□□ 0.35
SMC4-222ENST00000490207 ZNF426Q9BUY5 554 aa17.24■□□□□ 0.35
SMC4-222ENST00000490207 SLC19A3Q9BZV2 496 aa17.24■□□□□ 0.35
SMC4-222ENST00000490207 POLR2J2Q9GZM3 115 aaKnown RBP17.24■□□□□ 0.35
SMC4-222ENST00000490207 POLR2J3Q9H1A7 115 aaKnown RBP17.24■□□□□ 0.35
SMC4-222ENST00000490207 CRLF2Q9HC73 371 aa17.24■□□□□ 0.35
SMC4-222ENST00000490207 B3GAT2Q9NPZ5 323 aa17.24■□□□□ 0.35
SMC4-222ENST00000490207 NANSQ9NR45 359 aa17.24■□□□□ 0.35
SMC4-222ENST00000490207 CBLN4Q9NTU7 201 aa17.24■□□□□ 0.35
SMC4-222ENST00000490207 AP3M1Q9Y2T2 418 aa17.24■□□□□ 0.35
SMC4-222ENST00000490207 SETD2Q9BYW2 2564 aaPredicted RBP17.24■□□□□ 0.35
SMC4-222ENST00000490207 ELOVL7A1L3X0 281 aa17.23■□□□□ 0.35
SMC4-222ENST00000490207 SLC35F4A4IF30 521 aa17.23■□□□□ 0.35
SMC4-222ENST00000490207 FAM171A2A8MVW0 826 aa17.23■□□□□ 0.35
SMC4-222ENST00000490207 HOXB1P14653 301 aaPredicted RBP17.23■□□□□ 0.35
SMC4-222ENST00000490207 CLEC12BQ2HXU8 276 aa17.23■□□□□ 0.35
SMC4-222ENST00000490207 CYBRD1Q53TN4 286 aa17.23■□□□□ 0.35
SMC4-222ENST00000490207 PHYHD1Q5SRE7 291 aa17.23■□□□□ 0.35
SMC4-222ENST00000490207 C11orf71Q6IPW1 123 aa17.23■□□□□ 0.35
SMC4-222ENST00000490207 SPATA21Q7Z572 469 aa17.23■□□□□ 0.35
SMC4-222ENST00000490207 C20orf196Q8IYI0 205 aa17.23■□□□□ 0.35
SMC4-222ENST00000490207 MUC15Q8N387 334 aa17.23■□□□□ 0.35
SMC4-222ENST00000490207 TXNDC15Q96J42 360 aa17.23■□□□□ 0.35
SMC4-222ENST00000490207 HS6ST2Q96MM7 605 aa17.23■□□□□ 0.35
SMC4-222ENST00000490207 KCNS3Q9BQ31 491 aa17.23■□□□□ 0.35
SMC4-222ENST00000490207 CACNG6Q9BXT2 260 aa17.23■□□□□ 0.35
SMC4-222ENST00000490207 MOV10Q9HCE1 1003 aaKnown RBP17.23■□□□□ 0.35
SMC4-222ENST00000490207 CMTM6Q9NX76 183 aa17.23■□□□□ 0.35
SMC4-222ENST00000490207 ZNF99A8MXY4 864 aaPredicted RBP17.22■□□□□ 0.35
SMC4-222ENST00000490207 SHOX2O60902 331 aaPredicted RBP17.22■□□□□ 0.35
SMC4-222ENST00000490207 SEC14L2O76054 403 aa17.22■□□□□ 0.35
SMC4-222ENST00000490207 OR5F1O95221 314 aa17.22■□□□□ 0.35
SMC4-222ENST00000490207 IGHV4-39P01824 125 aa17.22■□□□□ 0.35
SMC4-222ENST00000490207 UMPSP11172 480 aa17.22■□□□□ 0.35
SMC4-222ENST00000490207 KDELR2P33947 212 aa17.22■□□□□ 0.35
SMC4-222ENST00000490207 OR1E2P47887 323 aa17.22■□□□□ 0.35
SMC4-222ENST00000490207 CAMK2DQ13557 499 aa17.22■□□□□ 0.35
SMC4-222ENST00000490207 NHLRC1Q6VVB1 395 aa17.22■□□□□ 0.35
SMC4-222ENST00000490207 Q71RC1 249 aaPredicted RBP17.22■□□□□ 0.35
SMC4-222ENST00000490207 TREML1Q86YW5 311 aa17.22■□□□□ 0.35
SMC4-222ENST00000490207 WDFY1Q8IWB7 410 aa17.22■□□□□ 0.35
SMC4-222ENST00000490207 ZNF837Q96EG3 531 aaPredicted RBP17.22■□□□□ 0.35
SMC4-222ENST00000490207 TPD52L3Q96J77 140 aa17.22■□□□□ 0.35
SMC4-222ENST00000490207 LRR1Q96L50 414 aa17.22■□□□□ 0.35
SMC4-222ENST00000490207 KATNB1Q9BVA0 655 aa17.22■□□□□ 0.35
SMC4-222ENST00000490207 CRNNQ9UBG3 495 aaPredicted RBP17.22■□□□□ 0.35
SMC4-222ENST00000490207 ZNF229Q9UJW7 825 aa17.22■□□□□ 0.35
SMC4-222ENST00000490207 GDF2Q9UK05 429 aaPredicted RBP17.22■□□□□ 0.35
SMC4-222ENST00000490207 MOKQ9UQ07 419 aa17.22■□□□□ 0.35
SMC4-222ENST00000490207 ZNF726A6NNF4 738 aa17.21■□□□□ 0.35
SMC4-222ENST00000490207 NDUFS7O75251 213 aa17.21■□□□□ 0.35
SMC4-222ENST00000490207 HEXAP06865 529 aa17.21■□□□□ 0.35
SMC4-222ENST00000490207 IFNGR1P15260 489 aa17.21■□□□□ 0.35
SMC4-222ENST00000490207 UGT2B15P54855 530 aa17.21■□□□□ 0.35
SMC4-222ENST00000490207 ZP4Q12836 540 aa17.21■□□□□ 0.35
SMC4-222ENST00000490207 C3orf36Q3SXR2 165 aa17.21■□□□□ 0.35
SMC4-222ENST00000490207 SLC46A3Q7Z3Q1 461 aa17.21■□□□□ 0.35
SMC4-222ENST00000490207 NANOGNBQ7Z5D8 188 aa17.21■□□□□ 0.35
SMC4-222ENST00000490207 NKAIN4Q8IVV8 208 aa17.21■□□□□ 0.35
SMC4-222ENST00000490207 SLC15A3Q8IY34 581 aa17.21■□□□□ 0.35
SMC4-222ENST00000490207 LRRC17Q8N6Y2 441 aa17.21■□□□□ 0.35
SMC4-222ENST00000490207 OR6N1Q8NGY5 312 aa17.21■□□□□ 0.35
SMC4-222ENST00000490207 ADAD1Q96M93 576 aaKnown RBP17.21■□□□□ 0.35
SMC4-222ENST00000490207 ELAC2Q9BQ52 826 aaKnown RBP17.21■□□□□ 0.35
SMC4-222ENST00000490207 ULBP2Q9BZM5 246 aa17.21■□□□□ 0.35
SMC4-222ENST00000490207 BARX1Q9HBU1 254 aaPredicted RBP17.21■□□□□ 0.35
SMC4-222ENST00000490207 GMPR2Q9P2T1 348 aaKnown RBP17.21■□□□□ 0.35
SMC4-222ENST00000490207 RNF13O43567 381 aa17.2■□□□□ 0.34
SMC4-222ENST00000490207 IGLV1-44P01699 117 aa17.2■□□□□ 0.34
SMC4-222ENST00000490207 HIST1H2ABP04908 130 aa17.2■□□□□ 0.34
SMC4-222ENST00000490207 ASAH2BP0C7U1 165 aa17.2■□□□□ 0.34
SMC4-222ENST00000490207 CECR9P0C854 216 aa17.2■□□□□ 0.34
SMC4-222ENST00000490207 ACVR1BP36896 505 aa17.2■□□□□ 0.34
SMC4-222ENST00000490207 RBM34P42696 430 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms