RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 ARHGEF39Q8N4T4 335 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 TRAM1L1Q8N609 369 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 OR4K5Q8NGD3 323 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 OR10R2Q8NGX6 335 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 TERB2Q8NHR7 220 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 PPCDCQ96CD2 204 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 VWCEQ96DN2 955 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 SLC25A38Q96DW6 304 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 HMCESQ96FZ2 354 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 SMIM8Q96KF7 97 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF385AQ96PM9 386 aaKnown RBP4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 SMOQ99835 787 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 SULT4A1Q9BR01 284 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 ACBD6Q9BR61 282 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 MRI1Q9BV20 369 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 FNDC11Q9BVV2 318 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 SUCNR1Q9BXA5 334 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 SYT4Q9H2B2 425 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 ISG20L2Q9H9L3 353 aaKnown RBP4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 APMAPQ9HDC9 416 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 INPP5EQ9NRR6 644 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 SAGE1Q9NXZ1 904 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 CALML5Q9NZT1 146 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 DOK5Q9P104 306 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 UPB1Q9UBR1 384 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 LPAR3Q9UBY5 353 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 ZDHHC8Q9ULC8 765 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 GAB2Q9UQC2 676 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 ASF1AQ9Y294 204 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 FAM96BQ9Y3D0 163 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 FLVCR1Q9Y5Y0 555 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 COL5A3P25940 1745 aaPredicted RBP4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 A0A087WUJ7 227 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 MGAT4DA6NG13 374 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 IQCF5A8MTL0 148 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF724A8MTY0 619 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 M0QZK8 103 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 IRAK2O43187 625 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 HBP1O60381 514 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 CHRM4P08173 479 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 SNRNP70P08621 437 aaKnown RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 FGF7P21781 194 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 MC4RP32245 332 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 DCTDP32321 178 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 AHRP35869 848 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 IFNGR2P38484 337 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 OPRD1P41143 372 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 CD200P41217 278 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 MAP3K8P41279 467 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 TAF6P49848 677 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 CCR4P51679 360 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 HBA1P69905 142 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 TWF1Q12792 350 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 RHEBQ15382 184 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 DCAF4L1Q3SXM0 396 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 EXOSC6Q5RKV6 272 aaKnown RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 ADGRF1Q5T601 910 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 PTRHD1Q6GMV3 140 aaKnown RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 EIF5AL1Q6IS14 154 aaKnown RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 FAM199XQ6PEV8 388 aaPredicted RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 CERS6Q6ZMG9 384 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF574Q6ZN55 896 aaPredicted RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 GLT6D1Q7Z4J2 308 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 TMPRSS11BQ86T26 416 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 CD163Q86VB7 1156 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 FJX1Q86VR8 437 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 IQCHQ86VS3 1027 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 MON1AQ86VX9 555 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 GLB1L2Q8IW92 636 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 SLC35F3Q8IY50 421 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 TCEAL8Q8IYN2 117 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 FAM24BQ8N5W8 94 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 PCSK9Q8NBP7 692 aaKnown RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 GPR32P1Q8NGA4 272 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 OR51S1Q8NGJ8 323 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 OR13C3Q8NGS6 347 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 LGALS14Q8TCE9 139 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 TRAPPC12Q8WVT3 735 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 PHYHIPQ92561 330 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 PSMG2Q969U7 264 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 BSCL2Q96G97 398 aaPredicted RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 KIRREL1Q96J84 757 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF558Q96NG5 402 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 PTCHD1Q96NR3 888 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 TGM7Q96PF1 710 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 FCRL4Q96PJ5 515 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 TIMP4Q99727 224 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 ADAM2Q99965 735 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 ORAI3Q9BRQ5 295 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 NDC1Q9BTX1 674 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 TMEM208Q9BTX3 173 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 PRDM14Q9GZV8 571 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 OR51V1Q9H2C8 321 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 OR51I1Q9H343 314 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 EPHX3Q9H6B9 360 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 PRDM7Q9NQW5 492 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 UBQLN4Q9NRR5 601 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 ADARB2Q9NS39 739 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms