RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 KLHL14Q9P2G3 628 aa10.7□□□□□ -0.7
CPSF3-204ENST00000489403 USP22Q9UPT9 525 aa10.7□□□□□ -0.7
CPSF3-204ENST00000489403 TRAV36DV7A0A075B6V5 113 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 LOC102725191A0A1B0GVB3 256 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 LYNX1G3V0Z9 82 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 MS4A18H0YCH9 400 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 HPRP00739 348 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 HLA-HP01893 362 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 ADRA2AP08913 450 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 LYNX1P0DP58 116 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 ETS2P15036 469 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 IFNGR1P15260 489 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 POU3F1Q03052 451 aaPredicted RBP10.69□□□□□ -0.7
CPSF3-204ENST00000489403 GSG1Q2KHT4 349 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 MS4A18Q3C1V0 323 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 GLIPR1L2Q4G1C9 344 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 LIPNQ5VXI9 398 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 CARD17Q5XLA6 110 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 DHRS4L2Q6PKH6 230 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 WDFY1Q8IWB7 410 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 UEVLDQ8IX04 471 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 CCDC36Q8IYA8 594 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 C20orf196Q8IYI0 205 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 C10orf111Q8N326 155 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 MIER2Q8N344 545 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 IL17RDQ8NFM7 739 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 NFKBIDQ8NI38 313 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 MRPL24Q96A35 216 aaKnown RBP10.69□□□□□ -0.7
CPSF3-204ENST00000489403 SLC41A3Q96GZ6 507 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 C1orf159Q96HA4 380 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 ZNF75AQ96N20 296 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 EMC6Q9BV81 110 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 MRPL37Q9BZE1 423 aaKnown RBP10.69□□□□□ -0.7
CPSF3-204ENST00000489403 RAD21L1Q9H4I0 556 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 SLC25A37Q9NYZ2 338 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 TMEFF2Q9UIK5 374 aaPredicted RBP10.69□□□□□ -0.7
CPSF3-204ENST00000489403 RAB21Q9UL25 225 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 CMAHPQ9Y471 501 aa10.69□□□□□ -0.7
CPSF3-204ENST00000489403 A0A087WUJ7 227 aa10.68□□□□□ -0.7
CPSF3-204ENST00000489403 C5orf58C9J3I9 102 aa10.68□□□□□ -0.7
CPSF3-204ENST00000489403 TCF21O43680 179 aa10.68□□□□□ -0.7
CPSF3-204ENST00000489403 TPST1O60507 370 aa10.68□□□□□ -0.7
CPSF3-204ENST00000489403 BGLAPP02818 100 aa10.68□□□□□ -0.7
CPSF3-204ENST00000489403 ARAFP10398 606 aa10.68□□□□□ -0.7
CPSF3-204ENST00000489403 CD79AP11912 226 aa10.68□□□□□ -0.7
CPSF3-204ENST00000489403 NQO1P15559 274 aaKnown RBP10.68□□□□□ -0.7
CPSF3-204ENST00000489403 ZNF14P17017 642 aaPredicted RBP10.68□□□□□ -0.7
CPSF3-204ENST00000489403 NR4A1P22736 598 aa10.68□□□□□ -0.7
CPSF3-204ENST00000489403 CCNIQ14094 377 aa10.68□□□□□ -0.7
CPSF3-204ENST00000489403 NET1Q7Z628 596 aaPredicted RBP10.68□□□□□ -0.7
CPSF3-204ENST00000489403 CROCCP2Q86T23 111 aa10.68□□□□□ -0.7
CPSF3-204ENST00000489403 MSRB3Q8IXL7 192 aa10.68□□□□□ -0.7
CPSF3-204ENST00000489403 GOLGA6L1Q8N7Z2 621 aa10.68□□□□□ -0.7
CPSF3-204ENST00000489403 OR6S1Q8NH40 331 aa10.68□□□□□ -0.7
CPSF3-204ENST00000489403 DNAJA4Q8WW22 397 aaPredicted RBP10.68□□□□□ -0.7
CPSF3-204ENST00000489403 LRR1Q96L50 414 aa10.68□□□□□ -0.7
CPSF3-204ENST00000489403 MED29Q9NX70 200 aa10.68□□□□□ -0.7
CPSF3-204ENST00000489403 ZNF224Q9NZL3 707 aa10.68□□□□□ -0.7
CPSF3-204ENST00000489403 TESQ9UGI8 421 aaKnown RBP10.68□□□□□ -0.7
CPSF3-204ENST00000489403 CORINQ9Y5Q5 1042 aa10.68□□□□□ -0.7
CPSF3-204ENST00000489403 SYNGR3O43761 229 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 ZNF35P13682 527 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 B4GALT1P15291 398 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 ITGA2P17301 1181 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 SRP14P37108 136 aaKnown RBP10.67□□□□□ -0.7
CPSF3-204ENST00000489403 EVX1P49640 407 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 DVL1P1P54792 670 aaPredicted RBP10.67□□□□□ -0.7
CPSF3-204ENST00000489403 AQP5P55064 265 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 NCALDP61601 193 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 PIGFQ07326 219 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 CAMK2DQ13557 499 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 MFSD13AQ14CX5 517 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 ELFN2Q5R3F8 820 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 LRIF1Q5T3J3 769 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 GCNT6Q5T4J0 391 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 FAM91A1Q658Y4 838 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 ULK3Q6PHR2 472 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 NHLRC1Q6VVB1 395 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 ZNF813Q6ZN06 617 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 RINLQ6ZS11 566 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 ZNF627Q7L945 461 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 RNF217Q8TC41 542 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 SLC47A1Q96FL8 570 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 TXNDC15Q96J42 360 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 MOGAT1Q96PD6 335 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 FOXB1Q99853 325 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 SYT3Q9BQG1 590 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 WFDC6Q9BQY6 131 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 ASPNQ9BXN1 380 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 SLAMF8Q9P0V8 285 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 USH1CQ9Y6N9 552 aa10.67□□□□□ -0.7
CPSF3-204ENST00000489403 A0A0B4J2E0 115 aa10.66□□□□□ -0.7
CPSF3-204ENST00000489403 A0A1B0GX12 115 aa10.66□□□□□ -0.7
CPSF3-204ENST00000489403 LRRN3E7EW58 273 aa10.66□□□□□ -0.7
CPSF3-204ENST00000489403 M0R233 179 aa10.66□□□□□ -0.7
CPSF3-204ENST00000489403 TPST2O60704 377 aa10.66□□□□□ -0.7
CPSF3-204ENST00000489403 HPXP02790 462 aa10.66□□□□□ -0.7
CPSF3-204ENST00000489403 TCN1P20061 433 aaPredicted RBP10.66□□□□□ -0.7
CPSF3-204ENST00000489403 GLRXP35754 106 aa10.66□□□□□ -0.7
CPSF3-204ENST00000489403 ALDH3B1P43353 468 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms