RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 ATP6V1G2-DDX39BF2Z307 99 aa21.8■■□□□ 1.08
HMGN1-217ENST00000489072 AKAP8O43823 692 aaKnown RBP21.8■■□□□ 1.08
HMGN1-217ENST00000489072 IGHV4-39P01824 125 aa21.8■■□□□ 1.08
HMGN1-217ENST00000489072 TTKP33981 857 aa21.8■■□□□ 1.08
HMGN1-217ENST00000489072 ZNF74Q16587 644 aa21.8■■□□□ 1.08
HMGN1-217ENST00000489072 CEACAM16Q2WEN9 425 aa21.8■■□□□ 1.08
HMGN1-217ENST00000489072 AGAP6Q5VW22 663 aa21.8■■□□□ 1.08
HMGN1-217ENST00000489072 CARD17Q5XLA6 110 aa21.8■■□□□ 1.08
HMGN1-217ENST00000489072 C11orf71Q6IPW1 123 aa21.8■■□□□ 1.08
HMGN1-217ENST00000489072 TTC33Q6PID6 262 aaPredicted RBP21.8■■□□□ 1.08
HMGN1-217ENST00000489072 DEPDC4Q8N2C3 294 aa21.8■■□□□ 1.08
HMGN1-217ENST00000489072 PIK3C3Q8NEB9 887 aa21.8■■□□□ 1.08
HMGN1-217ENST00000489072 OR5J2Q8NH18 312 aa21.8■■□□□ 1.08
HMGN1-217ENST00000489072 RP9Q8TA86 221 aaKnown RBP21.8■■□□□ 1.08
HMGN1-217ENST00000489072 CRLF2Q9HC73 371 aa21.8■■□□□ 1.08
HMGN1-217ENST00000489072 CMTM6Q9NX76 183 aa21.8■■□□□ 1.08
HMGN1-217ENST00000489072 BAG5Q9UL15 447 aa21.8■■□□□ 1.08
HMGN1-217ENST00000489072 NOX1Q9Y5S8 564 aa21.8■■□□□ 1.08
HMGN1-217ENST00000489072 ATP23Q9Y6H3 246 aa21.8■■□□□ 1.08
HMGN1-217ENST00000489072 FN1P02751 2386 aaKnown RBP21.8■■□□□ 1.08
HMGN1-217ENST00000489072 KPNA4O00629 521 aaPredicted RBP21.79■■□□□ 1.08
HMGN1-217ENST00000489072 SHOX2O60902 331 aaPredicted RBP21.79■■□□□ 1.08
HMGN1-217ENST00000489072 CH25HO95992 272 aa21.79■■□□□ 1.08
HMGN1-217ENST00000489072 COX4I1P13073 169 aa21.79■■□□□ 1.08
HMGN1-217ENST00000489072 UBE2NP61088 152 aaKnown RBP21.79■■□□□ 1.08
HMGN1-217ENST00000489072 CLEC9AQ6UXN8 241 aa21.79■■□□□ 1.08
HMGN1-217ENST00000489072 C20orf196Q8IYI0 205 aa21.79■■□□□ 1.08
HMGN1-217ENST00000489072 MPP4Q96JB8 637 aa21.79■■□□□ 1.08
HMGN1-217ENST00000489072 SLC38A2Q96QD8 506 aa21.79■■□□□ 1.08
HMGN1-217ENST00000489072 FKRPQ9H9S5 495 aa21.79■■□□□ 1.08
HMGN1-217ENST00000489072 GDF2Q9UK05 429 aaPredicted RBP21.79■■□□□ 1.08
HMGN1-217ENST00000489072 MOKQ9UQ07 419 aa21.79■■□□□ 1.08
HMGN1-217ENST00000489072 ARFGEF3Q5TH69 2177 aa21.78■■□□□ 1.08
HMGN1-217ENST00000489072 SLC35F4A4IF30 521 aa21.78■■□□□ 1.08
HMGN1-217ENST00000489072 M0R3G1 203 aa21.78■■□□□ 1.08
HMGN1-217ENST00000489072 ATP8B1O43520 1251 aa21.78■■□□□ 1.08
HMGN1-217ENST00000489072 SERPINI2O75830 405 aa21.78■■□□□ 1.08
HMGN1-217ENST00000489072 LY6G6DO95868 133 aa21.78■■□□□ 1.08
HMGN1-217ENST00000489072 AHCYP23526 432 aa21.78■■□□□ 1.08
HMGN1-217ENST00000489072 FABP6P51161 128 aa21.78■■□□□ 1.08
HMGN1-217ENST00000489072 TNK1Q13470 666 aa21.78■■□□□ 1.08
HMGN1-217ENST00000489072 CYBRD1Q53TN4 286 aa21.78■■□□□ 1.08
HMGN1-217ENST00000489072 PXKQ7Z7A4 578 aa21.78■■□□□ 1.08
HMGN1-217ENST00000489072 TREML1Q86YW5 311 aa21.78■■□□□ 1.08
HMGN1-217ENST00000489072 MICU2Q8IYU8 434 aa21.78■■□□□ 1.08
HMGN1-217ENST00000489072 MUC15Q8N387 334 aa21.78■■□□□ 1.08
HMGN1-217ENST00000489072 LRRC17Q8N6Y2 441 aa21.78■■□□□ 1.08
HMGN1-217ENST00000489072 OR2T12Q8NG77 320 aa21.78■■□□□ 1.08
HMGN1-217ENST00000489072 CBLN4Q9NTU7 201 aa21.78■■□□□ 1.08
HMGN1-217ENST00000489072 CRNNQ9UBG3 495 aaPredicted RBP21.78■■□□□ 1.08
HMGN1-217ENST00000489072 C11orf98E9PRG8 122 aa21.77■■□□□ 1.08
HMGN1-217ENST00000489072 SEC14L2O76054 403 aa21.77■■□□□ 1.08
HMGN1-217ENST00000489072 ADORA3P0DMS8 318 aa21.77■■□□□ 1.08
HMGN1-217ENST00000489072 KDELR2P33947 212 aa21.77■■□□□ 1.08
HMGN1-217ENST00000489072 ACVR1BP36896 505 aa21.77■■□□□ 1.08
HMGN1-217ENST00000489072 OR1E2P47887 323 aa21.77■■□□□ 1.08
HMGN1-217ENST00000489072 CLEC12BQ2HXU8 276 aa21.77■■□□□ 1.08
HMGN1-217ENST00000489072 LRRC23Q53EV4 343 aaPredicted RBP21.77■■□□□ 1.08
HMGN1-217ENST00000489072 DEF8Q6ZN54 512 aa21.77■■□□□ 1.08
HMGN1-217ENST00000489072 FBXL14Q8N1E6 418 aa21.77■■□□□ 1.08
HMGN1-217ENST00000489072 POM121Q96HA1 1249 aa21.77■■□□□ 1.08
HMGN1-217ENST00000489072 SLC19A3Q9BZV2 496 aa21.77■■□□□ 1.08
HMGN1-217ENST00000489072 SEC61A2Q9H9S3 476 aa21.77■■□□□ 1.08
HMGN1-217ENST00000489072 MEPEQ9NQ76 525 aaPredicted RBP21.77■■□□□ 1.08
HMGN1-217ENST00000489072 TAS2R5Q9NYW4 299 aa21.77■■□□□ 1.08
HMGN1-217ENST00000489072 ZNF503-AS2A6NEH8 195 aa21.76■■□□□ 1.07
HMGN1-217ENST00000489072 CCDC22O60826 627 aa21.76■■□□□ 1.07
HMGN1-217ENST00000489072 HOXB1P14653 301 aaPredicted RBP21.76■■□□□ 1.07
HMGN1-217ENST00000489072 HOXB4P17483 251 aaPredicted RBP21.76■■□□□ 1.07
HMGN1-217ENST00000489072 CAMK2DQ13557 499 aa21.76■■□□□ 1.07
HMGN1-217ENST00000489072 ETFDHQ16134 617 aa21.76■■□□□ 1.07
HMGN1-217ENST00000489072 ZNF544Q6NX49 715 aa21.76■■□□□ 1.07
HMGN1-217ENST00000489072 SLC46A3Q7Z3Q1 461 aa21.76■■□□□ 1.07
HMGN1-217ENST00000489072 NKAIN4Q8IVV8 208 aa21.76■■□□□ 1.07
HMGN1-217ENST00000489072 SLC15A3Q8IY34 581 aa21.76■■□□□ 1.07
HMGN1-217ENST00000489072 LRR1Q96L50 414 aa21.76■■□□□ 1.07
HMGN1-217ENST00000489072 CACNG6Q9BXT2 260 aa21.76■■□□□ 1.07
HMGN1-217ENST00000489072 NANSQ9NR45 359 aa21.76■■□□□ 1.07
HMGN1-217ENST00000489072 CR1P17927 2039 aa21.75■■□□□ 1.07
HMGN1-217ENST00000489072 ELOVL7A1L3X0 281 aa21.75■■□□□ 1.07
HMGN1-217ENST00000489072 ZNF99A8MXY4 864 aaPredicted RBP21.75■■□□□ 1.07
HMGN1-217ENST00000489072 IFNA14P01570 189 aa21.75■■□□□ 1.07
HMGN1-217ENST00000489072 IGLV1-44P01699 117 aa21.75■■□□□ 1.07
HMGN1-217ENST00000489072 HEXAP06865 529 aa21.75■■□□□ 1.07
HMGN1-217ENST00000489072 CECR9P0C854 216 aa21.75■■□□□ 1.07
HMGN1-217ENST00000489072 IFNGR1P15260 489 aa21.75■■□□□ 1.07
HMGN1-217ENST00000489072 SEC24CP53992 1094 aa21.75■■□□□ 1.07
HMGN1-217ENST00000489072 TAS2R41P59536 307 aa21.75■■□□□ 1.07
HMGN1-217ENST00000489072 ZP4Q12836 540 aa21.75■■□□□ 1.07
HMGN1-217ENST00000489072 PIN1Q13526 163 aaPredicted RBP21.75■■□□□ 1.07
HMGN1-217ENST00000489072 MYPOPQ86VE0 399 aaPredicted RBP21.75■■□□□ 1.07
HMGN1-217ENST00000489072 ELAC2Q9BQ52 826 aaKnown RBP21.75■■□□□ 1.07
HMGN1-217ENST00000489072 RIMS3Q9UJD0 308 aa21.75■■□□□ 1.07
HMGN1-217ENST00000489072 ZNF229Q9UJW7 825 aa21.75■■□□□ 1.07
HMGN1-217ENST00000489072 ZNF726A6NNF4 738 aa21.74■■□□□ 1.07
HMGN1-217ENST00000489072 OR5F1O95221 314 aa21.74■■□□□ 1.07
HMGN1-217ENST00000489072 OR6A2O95222 327 aa21.74■■□□□ 1.07
HMGN1-217ENST00000489072 CELA3BP08861 270 aa21.74■■□□□ 1.07
HMGN1-217ENST00000489072 ASAH2BP0C7U1 165 aa21.74■■□□□ 1.07
HMGN1-217ENST00000489072 PAX7P23759 505 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms