RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 GRB7Q14451 532 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 OXA1LQ15070 435 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 MICBQ29980 383 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 PARP15Q460N3 678 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 BCL7AQ4VC05 210 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 PAGE3Q5JUK9 113 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 LRRC66Q68CR7 880 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 ACOT7LQ6ZUV0 252 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 BZW1Q7L1Q6 419 aaKnown RBP2.12□□□□□ -2.07
RFC4-213ENST00000489028 FTMTQ8N4E7 242 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 FAM71E2Q8N5Q1 922 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 OR2L3Q8NG85 312 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 OR52H1Q8NGJ2 320 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 OR1L6Q8NGR2 347 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 FAM81AQ8TBF8 368 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 SLC22A8Q8TCC7 542 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.12□□□□□ -2.07
RFC4-213ENST00000489028 PLEKHA8Q96JA3 519 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 C12orf42Q96LP6 360 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 PANX2Q96RD6 677 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 MTG1Q9BT17 334 aaPredicted RBP2.12□□□□□ -2.07
RFC4-213ENST00000489028 SELENOIQ9C0D9 397 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 FOLH1BQ9HBA9 442 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 THUMPD1Q9NXG2 353 aaKnown RBP2.12□□□□□ -2.07
RFC4-213ENST00000489028 SLC7A8Q9UHI5 535 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.11□□□□□ -2.07
RFC4-213ENST00000489028 IGKV2D-24A0A075B6R9 120 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 IGKV6-21A0A0C4DH24 114 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 A0A0G2JRQ6 117 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 A6NDX4 124 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 H0YIV9 168 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 DYNC1I1O14576 645 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 HSD17B6O14756 317 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 LSM1O15116 133 aaKnown RBP2.11□□□□□ -2.07
RFC4-213ENST00000489028 PSTPIP1O43586 416 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 ZNF780AO75290 641 aaPredicted RBP2.11□□□□□ -2.07
RFC4-213ENST00000489028 CDH16O75309 829 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 ZNF324O75467 553 aaPredicted RBP2.11□□□□□ -2.07
RFC4-213ENST00000489028 LGI1O95970 557 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 FTH1P02794 183 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 P04436 131 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 SERPIND1P05546 499 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 KLK3P07288 261 aaPredicted RBP2.11□□□□□ -2.07
RFC4-213ENST00000489028 ANXA8P13928 327 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 OTX1P32242 354 aaPredicted RBP2.11□□□□□ -2.07
RFC4-213ENST00000489028 SHMT2P34897 504 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 DDOSTP39656 456 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 TNNT2P45379 298 aaPredicted RBP2.11□□□□□ -2.07
RFC4-213ENST00000489028 YAP1P46937 504 aaKnown RBP2.11□□□□□ -2.07
RFC4-213ENST00000489028 LHX2P50458 406 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 GPM6AP51674 278 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 KPNA2P52292 529 aaKnown RBP2.11□□□□□ -2.07
RFC4-213ENST00000489028 BIDP55957 195 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 RGS8P57771 180 aaPredicted RBP2.11□□□□□ -2.07
RFC4-213ENST00000489028 KCNJ2P63252 427 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 OR5I1Q13606 314 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 ARHGAP19Q14CB8 494 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 TGFBIQ15582 683 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 ZNF77Q15935 545 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 DGUOKQ16854 277 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 NSUN5P1Q3KNT7 163 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 VPS26BQ4G0F5 336 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 CARD16Q5EG05 197 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 ANXA8L1Q5VT79 327 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 C11orf71Q6IPW1 123 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 BIVMQ86UB2 503 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 VRK2Q86Y07 508 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 PSTKQ8IV42 348 aaKnown RBP2.11□□□□□ -2.07
RFC4-213ENST00000489028 Q8N9W7 124 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 FNDC5Q8NAU1 212 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 MDS2Q8NDY4 140 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 OR7G2Q8NG99 324 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 OR4F6Q8NGB9 312 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 OR4K14Q8NGD5 310 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 AGR3Q8TD06 166 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 BRSK1Q8TDC3 778 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 TSEN15Q8WW01 171 aaKnown RBP2.11□□□□□ -2.07
RFC4-213ENST00000489028 SLC38A4Q969I6 547 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 PAGE5Q96GU1 130 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 PGLYRP4Q96LB8 373 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 ZNF578Q96N58 590 aaPredicted RBP2.11□□□□□ -2.07
RFC4-213ENST00000489028 HIST1H4GQ99525 98 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 KLHDC3Q9BQ90 382 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 SCRT1Q9BWW7 348 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 MFFQ9GZY8 342 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 SUDS3Q9H7L9 328 aaPredicted RBP2.11□□□□□ -2.07
RFC4-213ENST00000489028 ZNF160Q9HCG1 818 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 NUP50Q9UKX7 468 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 STAP1Q9ULZ2 295 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 PSG11Q9UQ72 335 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 TP53TG5Q9Y2B4 290 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 KCNIP3Q9Y2W7 256 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 STARD10Q9Y365 291 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 UGT2A1Q9Y4X1 527 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 NEUROG3Q9Y4Z2 214 aa2.11□□□□□ -2.07
RFC4-213ENST00000489028 CSDC2Q9Y534 153 aaKnown RBP2.11□□□□□ -2.07
RFC4-213ENST00000489028 SCN2AQ99250 2005 aa2.1□□□□□ -2.07
RFC4-213ENST00000489028 IGHV1OR21-1A0A087WYE8 117 aa2.1□□□□□ -2.07
RFC4-213ENST00000489028 TRBV11-1A0A0K0K1C0 115 aa2.1□□□□□ -2.07
RFC4-213ENST00000489028 A0A1W2PPV9 198 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms