RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 PRR30Q53SZ7 412 aaPredicted RBP14.28□□□□□ -0.12
CLDN11-208ENST00000488989 SLC25A30Q5SVS4 291 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 ARMC4Q5T2S8 1044 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 FAM205BPQ63HN1 556 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 CHMP1BQ7LBR1 199 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 UEVLDQ8IX04 471 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 ARIH2OSQ8N7S6 290 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 LSM14AQ8ND56 463 aaKnown RBP14.28□□□□□ -0.12
CLDN11-208ENST00000488989 ASB10Q8WXI3 467 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 ROBO4Q8WZ75 1007 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 PHF3Q92576 2039 aaKnown RBP14.28□□□□□ -0.12
CLDN11-208ENST00000488989 Q96M85 177 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 SNX18Q96RF0 628 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 FN3KQ9H479 309 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 RNF122Q9H9V4 155 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 IMPAD1Q9NX62 359 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 CLCF1Q9UBD9 225 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 KLHL21Q9UJP4 597 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 ING1Q9UK53 422 aaPredicted RBP14.28□□□□□ -0.12
CLDN11-208ENST00000488989 RNF6Q9Y252 685 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 CLCA1A8K7I4 914 aa14.27□□□□□ -0.13
CLDN11-208ENST00000488989 PRKYO43930 277 aa14.27□□□□□ -0.13
CLDN11-208ENST00000488989 HIST1H1CP16403 213 aaKnown RBP14.27□□□□□ -0.13
CLDN11-208ENST00000488989 ZNF43P17038 809 aa14.27□□□□□ -0.13
CLDN11-208ENST00000488989 DAP3P51398 398 aaKnown RBP14.27□□□□□ -0.13
CLDN11-208ENST00000488989 POU3F1Q03052 451 aaPredicted RBP14.27□□□□□ -0.13
CLDN11-208ENST00000488989 CD47Q08722 323 aa14.27□□□□□ -0.13
CLDN11-208ENST00000488989 MAD2L1BPQ15013 274 aaPredicted RBP14.27□□□□□ -0.13
CLDN11-208ENST00000488989 PON3Q15166 354 aa14.27□□□□□ -0.13
CLDN11-208ENST00000488989 TMEM201Q5SNT2 666 aa14.27□□□□□ -0.13
CLDN11-208ENST00000488989 CREB3L2Q70SY1 520 aa14.27□□□□□ -0.13
CLDN11-208ENST00000488989 SLC35D2Q76EJ3 337 aa14.27□□□□□ -0.13
CLDN11-208ENST00000488989 FAM26EQ8N5C1 309 aa14.27□□□□□ -0.13
CLDN11-208ENST00000488989 TCEANCQ8N8B7 351 aa14.27□□□□□ -0.13
CLDN11-208ENST00000488989 OR9K2Q8NGE7 335 aa14.27□□□□□ -0.13
CLDN11-208ENST00000488989 TMEM163Q8TC26 289 aa14.27□□□□□ -0.13
CLDN11-208ENST00000488989 UBE2FQ969M7 185 aa14.27□□□□□ -0.13
CLDN11-208ENST00000488989 RASD2Q96D21 266 aa14.27□□□□□ -0.13
CLDN11-208ENST00000488989 CNBD2Q96M20 576 aa14.27□□□□□ -0.13
CLDN11-208ENST00000488989 GP6Q9HCN6 339 aa14.27□□□□□ -0.13
CLDN11-208ENST00000488989 UBAP1Q9NZ09 502 aa14.27□□□□□ -0.13
CLDN11-208ENST00000488989 KLHL13Q9P2N7 655 aa14.27□□□□□ -0.13
CLDN11-208ENST00000488989 GRHPRQ9UBQ7 328 aa14.27□□□□□ -0.13
CLDN11-208ENST00000488989 ZNF835Q9Y2P0 537 aa14.27□□□□□ -0.13
CLDN11-208ENST00000488989 TEX13CA0A0J9YWL9 993 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 WDR1O75083 606 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 AQP8O94778 261 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 SLC2A10O95528 541 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 BCL10O95999 233 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 PLGP00747 810 aaPredicted RBP14.26□□□□□ -0.13
CLDN11-208ENST00000488989 IFNGP01579 166 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 EDN3P14138 238 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 GABRA1P14867 456 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 IFNGR1P15260 489 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 NOS3P29474 1203 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 PTGER4P35408 488 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 IL5RAQ01344 420 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 RASGEF1BQ0VAM2 473 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 CDK5R2Q13319 367 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 KRR1Q13601 381 aaKnown RBP14.26□□□□□ -0.13
CLDN11-208ENST00000488989 SF3B4Q15427 424 aaKnown RBP eCLIP14.26□□□□□ -0.13
CLDN11-208ENST00000488989 MESTQ5EB52 335 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 SLC35F1Q5T1Q4 408 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 PTCHD4Q6ZW05 846 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 ADCK1Q86TW2 530 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 GPAT4Q86UL3 456 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 ZIC4Q8N9L1 334 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 SLC37A3Q8NCC5 494 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 NPEPL1Q8NDH3 523 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 OR6X1Q8NH79 312 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 FNDC9Q8TBE3 224 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 FAM57AQ8TBR7 257 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 APH1BQ8WW43 257 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 TXNDC15Q96J42 360 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 ADAD1Q96M93 576 aaKnown RBP14.26□□□□□ -0.13
CLDN11-208ENST00000488989 CALHM2Q9HA72 323 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 BCO1Q9HAY6 547 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 PNPLA3Q9NST1 481 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 KLHL9Q9P2J3 617 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 FLVCR1Q9Y5Y0 555 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 COL6A6A6NMZ7 2263 aa14.26□□□□□ -0.13
CLDN11-208ENST00000488989 A6NIZ1 184 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 CD8B2A6NJW9 211 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 RIIAD1A6NNX1 92 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 TTLL8A6PVC2 850 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 ZNF724A8MTY0 619 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 CENPBD1B2RD01 187 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 M0R129 80 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 ATXN7O15265 892 aaPredicted RBP14.25□□□□□ -0.13
CLDN11-208ENST00000488989 ZNHIT1O43257 154 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 TLX2O43763 284 aaPredicted RBP14.25□□□□□ -0.13
CLDN11-208ENST00000488989 AHCYL1O43865 530 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 WBP4O75554 376 aaKnown RBP14.25□□□□□ -0.13
CLDN11-208ENST00000488989 HOXD4P09016 255 aaPredicted RBP14.25□□□□□ -0.13
CLDN11-208ENST00000488989 FCGR2AP12318 317 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 ZNF3P17036 446 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 ACVR1BP36896 505 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 CDKN2AP42771 156 aaKnown RBP14.25□□□□□ -0.13
CLDN11-208ENST00000488989 RAP1BP61224 184 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 RAP1AP62834 184 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms