RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 FGF17O60258 216 aa17.82■□□□□ 0.44
HMG20B-213ENST00000488973 NKX2-2O95096 273 aa17.82■□□□□ 0.44
HMG20B-213ENST00000488973 EMDP50402 254 aa17.82■□□□□ 0.44
HMG20B-213ENST00000488973 RPS15P62841 145 aaKnown RBP17.82■□□□□ 0.44
HMG20B-213ENST00000488973 MGAT2Q10469 447 aa17.82■□□□□ 0.44
HMG20B-213ENST00000488973 ZNF684Q5T5D7 378 aa17.82■□□□□ 0.44
HMG20B-213ENST00000488973 SLC6A19Q695T7 634 aa17.82■□□□□ 0.44
HMG20B-213ENST00000488973 ULK3Q6PHR2 472 aa17.82■□□□□ 0.44
HMG20B-213ENST00000488973 ALKAL2Q6UX46 152 aa17.82■□□□□ 0.44
HMG20B-213ENST00000488973 ABHD13Q7L211 337 aa17.82■□□□□ 0.44
HMG20B-213ENST00000488973 SLC36A1Q7Z2H8 476 aa17.82■□□□□ 0.44
HMG20B-213ENST00000488973 ZNF614Q8N883 585 aa17.82■□□□□ 0.44
HMG20B-213ENST00000488973 NMNAT3Q96T66 252 aa17.82■□□□□ 0.44
HMG20B-213ENST00000488973 TINAGL1Q9GZM7 467 aaPredicted RBP17.82■□□□□ 0.44
HMG20B-213ENST00000488973 TTYH1Q9H313 450 aaPredicted RBP17.82■□□□□ 0.44
HMG20B-213ENST00000488973 ESRP2Q9H6T0 727 aaKnown RBP17.82■□□□□ 0.44
HMG20B-213ENST00000488973 ACTR10Q9NZ32 417 aa17.82■□□□□ 0.44
HMG20B-213ENST00000488973 SERGEFQ9UGK8 458 aa17.82■□□□□ 0.44
HMG20B-213ENST00000488973 ADAM18Q9Y3Q7 739 aa17.82■□□□□ 0.44
HMG20B-213ENST00000488973 IDSB3KWA1 339 aa17.82■□□□□ 0.44
HMG20B-213ENST00000488973 PYCARD-AS1I3L0S3 204 aa17.82■□□□□ 0.44
HMG20B-213ENST00000488973 ARPC3O15145 178 aa17.82■□□□□ 0.44
HMG20B-213ENST00000488973 GPR75O95800 540 aa17.82■□□□□ 0.44
HMG20B-213ENST00000488973 PTHLHP12272 177 aa17.82■□□□□ 0.44
HMG20B-213ENST00000488973 MAGEB1P43366 347 aa17.82■□□□□ 0.44
HMG20B-213ENST00000488973 RBMS2Q15434 407 aaKnown RBP17.82■□□□□ 0.44
HMG20B-213ENST00000488973 HSD17B13Q7Z5P4 300 aaPredicted RBP17.82■□□□□ 0.44
HMG20B-213ENST00000488973 DND1Q8IYX4 353 aaKnown RBP17.82■□□□□ 0.44
HMG20B-213ENST00000488973 SMARCD2Q92925 531 aa17.82■□□□□ 0.44
HMG20B-213ENST00000488973 RNF166Q96A37 237 aaPredicted RBP17.82■□□□□ 0.44
HMG20B-213ENST00000488973 ZNF707Q96C28 371 aaPredicted RBP17.82■□□□□ 0.44
HMG20B-213ENST00000488973 TCF7L1Q9HCS4 588 aa17.82■□□□□ 0.44
HMG20B-213ENST00000488973 MKKSQ9NPJ1 570 aaPredicted RBP17.82■□□□□ 0.44
HMG20B-213ENST00000488973 CTSFQ9UBX1 484 aa17.82■□□□□ 0.44
HMG20B-213ENST00000488973 OR6C68A6NDL8 312 aa17.81■□□□□ 0.44
HMG20B-213ENST00000488973 C5orf67F2Z3F1 127 aa17.81■□□□□ 0.44
HMG20B-213ENST00000488973 GLSO94925 669 aaPredicted RBP17.81■□□□□ 0.44
HMG20B-213ENST00000488973 VSIG10L2P0DP72 767 aa17.81■□□□□ 0.44
HMG20B-213ENST00000488973 MAPK3P27361 379 aaPredicted RBP17.81■□□□□ 0.44
HMG20B-213ENST00000488973 RPL4P36578 427 aaKnown RBP17.81■□□□□ 0.44
HMG20B-213ENST00000488973 SGCGQ13326 291 aa17.81■□□□□ 0.44
HMG20B-213ENST00000488973 CSRP2Q16527 193 aa17.81■□□□□ 0.44
HMG20B-213ENST00000488973 ISXQ2M1V0 245 aa17.81■□□□□ 0.44
HMG20B-213ENST00000488973 Q499Y3 187 aa17.81■□□□□ 0.44
HMG20B-213ENST00000488973 EIF4E3Q8N5X7 224 aaKnown RBP17.81■□□□□ 0.44
HMG20B-213ENST00000488973 BVESQ8NE79 360 aa17.81■□□□□ 0.44
HMG20B-213ENST00000488973 OR52B4Q8NGK2 314 aa17.81■□□□□ 0.44
HMG20B-213ENST00000488973 OR6K6Q8NGW6 343 aa17.81■□□□□ 0.44
HMG20B-213ENST00000488973 HOXB13Q92826 284 aaPredicted RBP17.81■□□□□ 0.44
HMG20B-213ENST00000488973 SPACA6W5XKT8 324 aa17.81■□□□□ 0.44
HMG20B-213ENST00000488973 MKI67P46013 3256 aaKnown RBP17.81■□□□□ 0.44
HMG20B-213ENST00000488973 COL4A2P08572 1712 aa17.81■□□□□ 0.44
HMG20B-213ENST00000488973 GK2Q14410 553 aaPredicted RBP17.81■□□□□ 0.44
HMG20B-213ENST00000488973 NDUFAF6Q330K2 333 aa17.81■□□□□ 0.44
HMG20B-213ENST00000488973 LRRN1Q6UXK5 716 aa17.81■□□□□ 0.44
HMG20B-213ENST00000488973 GSG1LQ6UXU4 331 aa17.81■□□□□ 0.44
HMG20B-213ENST00000488973 GLB1L2Q8IW92 636 aa17.81■□□□□ 0.44
HMG20B-213ENST00000488973 CAMKVQ8NCB2 501 aa17.81■□□□□ 0.44
HMG20B-213ENST00000488973 CTHRC1Q96CG8 243 aa17.81■□□□□ 0.44
HMG20B-213ENST00000488973 OR1F2PQ96R84 312 aa17.81■□□□□ 0.44
HMG20B-213ENST00000488973 ARL6Q9H0F7 186 aa17.81■□□□□ 0.44
HMG20B-213ENST00000488973 PPP1R14DQ9NXH3 145 aa17.81■□□□□ 0.44
HMG20B-213ENST00000488973 A0A1W2PP55 124 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 LINC01553A4QN01 128 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 DNASE2O00115 360 aaPredicted RBP17.8■□□□□ 0.44
HMG20B-213ENST00000488973 TNFSF14O43557 240 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 CTSVO60911 334 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 GLCEO94923 617 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 GUSBP08236 651 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 TACSTD2P09758 323 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 CT62P0C5K7 136 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 SCAND1P57086 179 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 RPS21P63220 83 aaKnown RBP17.8■□□□□ 0.44
HMG20B-213ENST00000488973 PDGFRLQ15198 375 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 FLVCR1-AS1Q8TAF5 88 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 GAL3ST1Q99999 423 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 GINS4Q9BRT9 223 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 MS4A7Q9GZW8 240 aaPredicted RBP17.8■□□□□ 0.44
HMG20B-213ENST00000488973 TSPAN10Q9H1Z9 355 aaPredicted RBP17.8■□□□□ 0.44
HMG20B-213ENST00000488973 SRMSQ9H3Y6 488 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 ZNF860A6NHJ4 632 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 ANXA2P2A6NMY6 339 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 H7C417 338 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 SCAMP1O15126 338 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 RBBP9O75884 186 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 AQP8O94778 261 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 ADH1BP00325 375 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 H2AFB1P0C5Y9 115 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 EN2P19622 333 aaPredicted RBP17.8■□□□□ 0.44
HMG20B-213ENST00000488973 C5AR1P21730 350 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 GPR143P51810 404 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 H2BFSP57053 126 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 PABPC1L2AQ5JQF8 200 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 C5orf46Q6UWT4 87 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 ZNF550Q7Z398 422 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 ZNF565Q8N9K5 539 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 OR5M1Q8NGP8 315 aa17.8■□□□□ 0.44
HMG20B-213ENST00000488973 SCARF2Q96GP6 870 aaPredicted RBP17.8■□□□□ 0.44
HMG20B-213ENST00000488973 RBM18Q96H35 190 aaKnown RBP17.8■□□□□ 0.44
HMG20B-213ENST00000488973 TAS2R8Q9NYW2 309 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms