RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 TMEM43Q9BTV4 400 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 TMEM120AQ9BXJ8 343 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 EVA1AQ9H8M9 152 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 CA10Q9NS85 328 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 MED29Q9NX70 200 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 MRPL39Q9NYK5 338 aaKnown RBP10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 CRNNQ9UBG3 495 aaPredicted RBP10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 ADAM21Q9UKJ8 722 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 JMJD1CQ15652 2540 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 ALPK2Q86TB3 2170 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 SLC35F4A4IF30 521 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 ZNF503-AS2A6NEH8 195 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 ZNF726A6NNF4 738 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 AKAP8O43823 692 aaKnown RBP10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 CD5LO43866 347 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 FMO6PO60774 539 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 CRLF1O75462 422 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 SERPINI2O75830 405 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 LYPD3O95274 346 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 F12P00748 615 aaPredicted RBP10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 IGLV1-44P01699 117 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 THY1P04216 161 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 OR4A8P0C604 315 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 CD247P20963 164 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 PAX7P23759 505 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 PCGF2P35227 344 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 CAPZA2P47755 286 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 GZMMP51124 257 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 IDH3GP51553 393 aaPredicted RBP10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 POU3F1Q03052 451 aaPredicted RBP10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 HGFACQ04756 655 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 PUDPQ08623 228 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 CAMK2DQ13557 499 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 CYLC2Q14093 348 aaPredicted RBP10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 ADIPOQQ15848 244 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 C3orf36Q3SXR2 165 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 NANOGP8Q6NSW7 305 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 ZNF613Q6PF04 617 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 LINC00114Q6XXX2 140 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 WDR88Q6ZMY6 472 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 PATL1Q86TB9 770 aaKnown RBP10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 MYPOPQ86VE0 399 aaPredicted RBP10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 FAM169BQ8N8A8 192 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 SLC26A7Q8TE54 656 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 FAM168AQ92567 244 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 SIKE1Q9BRV8 207 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 NANOGQ9H9S0 305 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 NOX1Q9Y5S8 564 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 DNHD1Q96M86 4753 aa10.37□□□□□ -0.75
CCHCR1-215ENST00000488920 A0A096LNT2 108 aa10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 ZNF99A8MXY4 864 aaPredicted RBP10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 C11orf98E9PRG8 122 aa10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 CHP2O43745 196 aa10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 OR6A2O95222 327 aa10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 CH25HO95992 272 aa10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 IGKV3-15P01624 115 aa10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 HLA-HP01893 362 aa10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 SNRPD2P62316 118 aaKnown RBP10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 NPRL3Q12980 569 aa10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 VMACQ2NL98 169 aa10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 RABL3Q5HYI8 236 aa10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 SLC46A3Q7Z3Q1 461 aa10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 PXKQ7Z7A4 578 aa10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 MDP1Q86V88 176 aa10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 TSPYL5Q86VY4 417 aaPredicted RBP10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 SLC30A8Q8IWU4 369 aa10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 LRRC17Q8N6Y2 441 aa10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 OR4F15Q8NGB8 312 aa10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 OR6N1Q8NGY5 312 aa10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 OR5J2Q8NH18 312 aa10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 ADAMTS16Q8TE57 1224 aa10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 C10orf105Q8TEF2 133 aa10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 LRR1Q96L50 414 aa10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 VRK1Q99986 396 aaPredicted RBP10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 MOV10Q9HCE1 1003 aaKnown RBP10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 SLC7A7Q9UM01 511 aa10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 POFUT2Q9Y2G5 429 aa10.36□□□□□ -0.75
CCHCR1-215ENST00000488920 TRAPPC13A5PLN9 417 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 KPNA4O00629 521 aaPredicted RBP10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 TLX2O43763 284 aaPredicted RBP10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 MT-ATP6P00846 226 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 ADORA3P0DMS8 318 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 TROVE2P10155 538 aaKnown RBP eCLIP10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 CD79AP11912 226 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 IFNGR1P15260 489 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 THBS4P35443 961 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 ARR3P36575 388 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 ARFIP2P53365 341 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 CRYBA2P53672 197 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 BIDP55957 195 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 PIGFQ07326 219 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 KLF10Q13118 480 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 ZNF74Q16587 644 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 TMEM249Q2WGJ8 235 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 TRMT5Q32P41 509 aaKnown RBP10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 MMEL1Q495T6 779 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 INTS11Q5TA45 600 aaKnown RBP10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 TTC33Q6PID6 262 aaPredicted RBP10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 ZNF813Q6ZN06 617 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 CCDC36Q8IYA8 594 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms