RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 ZNF613Q6PF04 617 aa11.35□□□□□ -0.59
ATPAF2-207ENST00000488753 ZNF627Q7L945 461 aa11.35□□□□□ -0.59
ATPAF2-207ENST00000488753 CXXC5Q7LFL8 322 aaKnown RBP11.35□□□□□ -0.59
ATPAF2-207ENST00000488753 DHDDSQ86SQ9 333 aa11.35□□□□□ -0.59
ATPAF2-207ENST00000488753 SNX32Q86XE0 403 aa11.35□□□□□ -0.59
ATPAF2-207ENST00000488753 SLC30A8Q8IWU4 369 aa11.35□□□□□ -0.59
ATPAF2-207ENST00000488753 C20orf196Q8IYI0 205 aa11.35□□□□□ -0.59
ATPAF2-207ENST00000488753 SPATA3Q8NHX4 192 aa11.35□□□□□ -0.59
ATPAF2-207ENST00000488753 NANOS1Q8WY41 292 aaKnown RBP11.35□□□□□ -0.59
ATPAF2-207ENST00000488753 ANKRD27Q96NW4 1050 aa11.35□□□□□ -0.59
ATPAF2-207ENST00000488753 SIKE1Q9BRV8 207 aa11.35□□□□□ -0.59
ATPAF2-207ENST00000488753 PRR14Q9BWN1 585 aa11.35□□□□□ -0.59
ATPAF2-207ENST00000488753 ZNF385DQ9H6B1 395 aa11.35□□□□□ -0.59
ATPAF2-207ENST00000488753 CDC42EP3Q9UKI2 254 aa11.35□□□□□ -0.59
ATPAF2-207ENST00000488753 NDUFAF1Q9Y375 327 aa11.35□□□□□ -0.59
ATPAF2-207ENST00000488753 COL6A5A8TX70 2615 aa11.34□□□□□ -0.59
ATPAF2-207ENST00000488753 LOC390937A0A1W2PQ73 354 aa11.34□□□□□ -0.59
ATPAF2-207ENST00000488753 VWC2LB2RUY7 222 aa11.34□□□□□ -0.59
ATPAF2-207ENST00000488753 ANGPT2O15123 496 aa11.34□□□□□ -0.59
ATPAF2-207ENST00000488753 MT-ATP6P00846 226 aa11.34□□□□□ -0.59
ATPAF2-207ENST00000488753 CALCRP30988 508 aa11.34□□□□□ -0.59
ATPAF2-207ENST00000488753 PPOXP50336 477 aa11.34□□□□□ -0.59
ATPAF2-207ENST00000488753 TUBA1BP68363 451 aa11.34□□□□□ -0.59
ATPAF2-207ENST00000488753 TUBA4AP68366 448 aa11.34□□□□□ -0.59
ATPAF2-207ENST00000488753 PMS2P3Q13401 168 aa11.34□□□□□ -0.59
ATPAF2-207ENST00000488753 CYP51A1Q16850 503 aa11.34□□□□□ -0.59
ATPAF2-207ENST00000488753 METTL21CQ5VZV1 264 aa11.34□□□□□ -0.59
ATPAF2-207ENST00000488753 NHLRC1Q6VVB1 395 aa11.34□□□□□ -0.59
ATPAF2-207ENST00000488753 TUBA1AQ71U36 451 aa11.34□□□□□ -0.59
ATPAF2-207ENST00000488753 SLC46A3Q7Z3Q1 461 aa11.34□□□□□ -0.59
ATPAF2-207ENST00000488753 PXKQ7Z7A4 578 aa11.34□□□□□ -0.59
ATPAF2-207ENST00000488753 PTOV1Q86YD1 416 aa11.34□□□□□ -0.59
ATPAF2-207ENST00000488753 RNF217Q8TC41 542 aa11.34□□□□□ -0.59
ATPAF2-207ENST00000488753 ZNF837Q96EG3 531 aaPredicted RBP11.34□□□□□ -0.59
ATPAF2-207ENST00000488753 SORCS2Q96PQ0 1159 aa11.34□□□□□ -0.59
ATPAF2-207ENST00000488753 ARHGDIGQ99819 225 aa11.34□□□□□ -0.59
ATPAF2-207ENST00000488753 PIMREGQ9BSJ6 248 aa11.34□□□□□ -0.59
ATPAF2-207ENST00000488753 B3GAT2Q9NPZ5 323 aa11.34□□□□□ -0.59
ATPAF2-207ENST00000488753 USP22Q9UPT9 525 aa11.34□□□□□ -0.59
ATPAF2-207ENST00000488753 CHD3Q12873 2000 aaKnown RBP11.34□□□□□ -0.59
ATPAF2-207ENST00000488753 M0R3G1 203 aa11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 PLPP3O14495 311 aa11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 CHP2O43745 196 aa11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 SASH3O75995 380 aa11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 LY6HO94772 140 aa11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 HPRP00739 348 aa11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 ERCC1P07992 297 aaPredicted RBP11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 VIMP08670 466 aaKnown RBP11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 FAM157CP0CG43 387 aa11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 HLA-DOBP13765 273 aa11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 CBLP22681 906 aa11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 NR4A2P43354 598 aa11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 GZMKP49863 264 aa11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 IDH3GP51553 393 aaPredicted RBP11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 LSM11P83369 360 aaKnown RBP eCLIP11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 POU3F1Q03052 451 aaPredicted RBP11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 HGFACQ04756 655 aa11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 DUSP7Q16829 419 aa11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 CYB5R2Q6BCY4 276 aa11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 LINC00114Q6XXX2 140 aa11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 PATL1Q86TB9 770 aaKnown RBP11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 RETREG3Q86VR2 466 aa11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 SMYD1Q8NB12 490 aa11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 ZNF540Q8NDQ6 660 aa11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 MOGAT1Q96PD6 335 aa11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 CGREF1Q99674 301 aa11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 MCHR1Q99705 422 aa11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 VRK1Q99986 396 aaPredicted RBP11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 WFDC6Q9BQY6 131 aa11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 RAB1BQ9H0U4 201 aa11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 DENND2DQ9H6A0 471 aaPredicted RBP11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 KAT8Q9H7Z6 458 aaKnown RBP11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 MRGBPQ9NV56 204 aa11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 LPAR3Q9UBY5 353 aa11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 HEATR1Q9H583 2144 aaKnown RBP11.33□□□□□ -0.6
ATPAF2-207ENST00000488753 IGHV2OR16-5A0A0B4J2B6 119 aa11.32□□□□□ -0.6
ATPAF2-207ENST00000488753 SLC35F4A4IF30 521 aa11.32□□□□□ -0.6
ATPAF2-207ENST00000488753 ZNF726A6NNF4 738 aa11.32□□□□□ -0.6
ATPAF2-207ENST00000488753 M0QX08 132 aa11.32□□□□□ -0.6
ATPAF2-207ENST00000488753 M0R3H8 397 aa11.32□□□□□ -0.6
ATPAF2-207ENST00000488753 EDF1O60869 148 aaKnown RBP11.32□□□□□ -0.6
ATPAF2-207ENST00000488753 CELA3BP08861 270 aa11.32□□□□□ -0.6
ATPAF2-207ENST00000488753 IGHV4-31P0DP07 118 aa11.32□□□□□ -0.6
ATPAF2-207ENST00000488753 NPR2P20594 1047 aa11.32□□□□□ -0.6
ATPAF2-207ENST00000488753 MTPNP58546 118 aa11.32□□□□□ -0.6
ATPAF2-207ENST00000488753 NFYCQ13952 458 aa11.32□□□□□ -0.6
ATPAF2-207ENST00000488753 PHYHD1Q5SRE7 291 aa11.32□□□□□ -0.6
ATPAF2-207ENST00000488753 INTS11Q5TA45 600 aaKnown RBP11.32□□□□□ -0.6
ATPAF2-207ENST00000488753 VHLLQ6RSH7 139 aa11.32□□□□□ -0.6
ATPAF2-207ENST00000488753 MDP1Q86V88 176 aa11.32□□□□□ -0.6
ATPAF2-207ENST00000488753 C10orf53Q8N6V4 93 aa11.32□□□□□ -0.6
ATPAF2-207ENST00000488753 GPR32P1Q8NGA4 272 aa11.32□□□□□ -0.6
ATPAF2-207ENST00000488753 OR6T1Q8NGN1 323 aa11.32□□□□□ -0.6
ATPAF2-207ENST00000488753 OR5J2Q8NH18 312 aa11.32□□□□□ -0.6
ATPAF2-207ENST00000488753 NEU4Q8WWR8 484 aaPredicted RBP11.32□□□□□ -0.6
ATPAF2-207ENST00000488753 RASSF5Q8WWW0 418 aa11.32□□□□□ -0.6
ATPAF2-207ENST00000488753 MPP4Q96JB8 637 aa11.32□□□□□ -0.6
ATPAF2-207ENST00000488753 DOK1Q99704 481 aa11.32□□□□□ -0.6
ATPAF2-207ENST00000488753 ULBP2Q9BZM5 246 aa11.32□□□□□ -0.6
ATPAF2-207ENST00000488753 SLC19A3Q9BZV2 496 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms