RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 KDM8Q8N371 416 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 TRIML2Q8N7C3 387 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 TMEM99Q8N816 258 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 OR52N5Q8NH56 324 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 NFKBIDQ8NI38 313 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 LRRC8CQ8TDW0 803 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 SLC38A5Q8WUX1 472 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 TMEM234Q8WY98 164 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 HTRA1Q92743 480 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 GTF2H4Q92759 462 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 ITCHQ96J02 903 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 ATP6V1G3Q96LB4 118 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 LRGUKQ96M69 825 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 TRNT1Q96Q11 434 aaKnown RBP5.19□□□□□ -1.58
CDHR3-213ENST00000488386 DCLRE1CQ96SD1 692 aaKnown RBP5.19□□□□□ -1.58
CDHR3-213ENST00000488386 WFDC6Q9BQY6 131 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 IKZF5Q9H5V7 419 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 AKIP1Q9NQ31 210 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 TCF7L2Q9NQB0 619 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 POLE3Q9NRF9 147 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 SDR39U1Q9NRG7 319 aaPredicted RBP5.19□□□□□ -1.58
CDHR3-213ENST00000488386 SERINC1Q9NRX5 453 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 GLRX2Q9NS18 164 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 BEX4Q9NWD9 120 aaPredicted RBP5.19□□□□□ -1.58
CDHR3-213ENST00000488386 ADPRHL2Q9NX46 363 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 SLC25A37Q9NYZ2 338 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 VSX1Q9NZR4 365 aaPredicted RBP5.19□□□□□ -1.58
CDHR3-213ENST00000488386 CCDC167Q9P0B6 97 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 KLHL9Q9P2J3 617 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 P2RX2Q9UBL9 471 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 SEC14L4Q9UDX3 406 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 GPR52Q9Y2T5 361 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 NOSIPQ9Y314 301 aaKnown RBP5.19□□□□□ -1.58
CDHR3-213ENST00000488386 ZFHX3Q15911 3703 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 ITPR3Q14573 2671 aa5.19□□□□□ -1.58
CDHR3-213ENST00000488386 USF3Q68DE3 2245 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 FAM234BA2RU67 622 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 CFAP73A6NFT4 308 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 CCT8L1PA6NM43 557 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 SLCO1B7G3V0H7 640 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 F2RL2O00254 374 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 CLIC1O00299 241 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 HS3ST1O14792 307 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 KLF11O14901 512 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 POLR3GO15318 223 aaPredicted RBP5.18□□□□□ -1.58
CDHR3-213ENST00000488386 TPST1O60507 370 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 SOX30O94993 753 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 PMS2P2O95744 297 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 DBIP07108 87 aaKnown RBP5.18□□□□□ -1.58
CDHR3-213ENST00000488386 HOXB9P17482 250 aaPredicted RBP5.18□□□□□ -1.58
CDHR3-213ENST00000488386 CDH2P19022 906 aaPredicted RBP5.18□□□□□ -1.58
CDHR3-213ENST00000488386 NCF2P19878 526 aaPredicted RBP5.18□□□□□ -1.58
CDHR3-213ENST00000488386 ACAA2P42765 397 aaKnown RBP5.18□□□□□ -1.58
CDHR3-213ENST00000488386 ZNF83P51522 516 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 POLR2HP52434 150 aaKnown RBP5.18□□□□□ -1.58
CDHR3-213ENST00000488386 CRISP3P54108 245 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 TUBA1BP68363 451 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 TUBA4AP68366 448 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 CSNK2A1P68400 391 aaPredicted RBP5.18□□□□□ -1.58
CDHR3-213ENST00000488386 ITGADQ13349 1161 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 RGNQ15493 299 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 GSTA3Q16772 222 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 BEAN1Q3B7T3 259 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 LIN52Q52LA3 116 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 AGKQ53H12 422 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 ZNF311Q5JNZ3 666 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 NCMAPQ5T1S8 102 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 OTUD3Q5T2D3 398 aaPredicted RBP5.18□□□□□ -1.58
CDHR3-213ENST00000488386 TSPO2Q5TGU0 170 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 B3GLCTQ6Y288 498 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 Q6ZT83 130 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 TUBA1AQ71U36 451 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 GPAT4Q86UL3 456 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 PEX5LQ8IYB4 626 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 KIRREL3Q8IZU9 778 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 SLC43A2Q8N370 569 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 STEAP2Q8NFT2 490 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 TBC1D15Q8TC07 691 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 DYDC1Q8WWB3 177 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 APH1AQ96BI3 265 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 SLC25A36Q96CQ1 311 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 SPDL1Q96EA4 605 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 C7orf26Q96N11 449 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 ZNF385AQ96PM9 386 aaKnown RBP5.18□□□□□ -1.58
CDHR3-213ENST00000488386 TMEM204Q9BSN7 226 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 RMND5AQ9H871 391 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 MTHFD2LQ9H903 347 aaPredicted RBP5.18□□□□□ -1.58
CDHR3-213ENST00000488386 HHATLQ9HCP6 504 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 SLC52A3Q9NQ40 469 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 EXOSC3Q9NQT5 275 aaKnown RBP5.18□□□□□ -1.58
CDHR3-213ENST00000488386 VAPAQ9P0L0 249 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 TMEM181Q9P2C4 612 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 DKK2Q9UBU2 259 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 LIPT1Q9Y234 373 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 RNF115Q9Y4L5 304 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 MAGED1Q9Y5V3 778 aaPredicted RBP5.18□□□□□ -1.58
CDHR3-213ENST00000488386 FLVCR1Q9Y5Y0 555 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 SPIN1Q9Y657 262 aaPredicted RBP5.18□□□□□ -1.58
CDHR3-213ENST00000488386 ACANP16112 2415 aa5.18□□□□□ -1.58
CDHR3-213ENST00000488386 ANK3Q12955 4377 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms