RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 RGS11O94810 467 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 KLK3P07288 261 aaPredicted RBP12.5□□□□□ -0.41
COPS7B-221ENST00000488111 CD3GP09693 182 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 GSTM3P21266 225 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 MMP15P51511 669 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 CDH11P55287 796 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 BDH1Q02338 343 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 SLC27A4Q6P1M0 643 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 EIF4E3Q8N5X7 224 aaKnown RBP12.5□□□□□ -0.41
COPS7B-221ENST00000488111 SLC16A11Q8NCK7 471 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 OR52R1Q8NGF1 315 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 ST8SIA2Q92186 375 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 MOAP1Q96BY2 351 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 CTHRC1Q96CG8 243 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 SPATA5L1Q9BVQ7 753 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 JAM3Q9BX67 310 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 PTGFRNQ9P2B2 879 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 RPS6KB2Q9UBS0 482 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 C19orf53Q9UNZ5 99 aaPredicted RBP12.5□□□□□ -0.41
COPS7B-221ENST00000488111 ERVK-19Q9WJR5 959 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 CCDC187A0A096LP49 1063 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 IGKV3D-11A0A0A0MRZ8 115 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 PRAMEF27A3QJZ7 478 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 C17orf105B2RV13 164 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 FZD7O75084 574 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 STK17BO94768 372 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 CBX7O95931 251 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 TGM6O95932 706 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 FCER2P06734 321 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 S1PR1P21453 382 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 LSM11P83369 360 aaKnown RBP eCLIP12.5□□□□□ -0.412e-6■■■■□ 23.2
COPS7B-221ENST00000488111 DUSP8Q13202 625 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 SERTAD2Q14140 314 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 SYPL1Q16563 259 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 SFXN4Q6P4A7 337 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 ZNF322Q6U7Q0 402 aaPredicted RBP12.5□□□□□ -0.41
COPS7B-221ENST00000488111 KLBQ86Z14 1044 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 TEX47Q8TBZ9 253 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 HAVCR2Q8TDQ0 301 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 ELMOD3Q96FG2 381 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 MS4A4EQ96PG1 132 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 OR7D2Q96RA2 312 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 TAAR9Q96RI9 348 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 EGLN3Q9H6Z9 239 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 NPDC1Q9NQX5 325 aaPredicted RBP12.5□□□□□ -0.41
COPS7B-221ENST00000488111 SPATA2Q9UM82 520 aa12.5□□□□□ -0.41
COPS7B-221ENST00000488111 IGLV3-12A0A075B6K2 115 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 IGHV3-20A0A0C4DH32 117 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 A0A0G2JK05 382 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 C9orf172C9J069 976 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 L7N2F9 121 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 TM4SF5O14894 197 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 SELENOFO60613 162 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 PEX14O75381 377 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 ALDOBP05062 364 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 HEXBP07686 556 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 POU3F2P20265 443 aaPredicted RBP12.49□□□□□ -0.41
COPS7B-221ENST00000488111 RNF144AP50876 292 aaPredicted RBP12.49□□□□□ -0.41
COPS7B-221ENST00000488111 NOVA1P51513 510 aaKnown RBP12.49□□□□□ -0.41
COPS7B-221ENST00000488111 RPS7P62081 194 aaKnown RBP12.49□□□□□ -0.41
COPS7B-221ENST00000488111 DGCR2P98153 550 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 DYRK1AQ13627 763 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 KLF9Q13886 244 aaPredicted RBP12.49□□□□□ -0.41
COPS7B-221ENST00000488111 GPR68Q15743 365 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 AADACL4Q5VUY2 407 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 SLC22A10Q63ZE4 541 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 B3GNTL1Q67FW5 361 aaPredicted RBP12.49□□□□□ -0.41
COPS7B-221ENST00000488111 MFSD12Q6NUT3 480 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 MED25Q71SY5 747 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 ZNF321PQ8N8H1 164 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 TRMT10AQ8TBZ6 339 aaKnown RBP12.49□□□□□ -0.41
COPS7B-221ENST00000488111 SCARB1Q8WTV0 552 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 PTPMT1Q8WUK0 201 aaPredicted RBP12.49□□□□□ -0.41
COPS7B-221ENST00000488111 ACTRT3Q9BYD9 372 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 TMPRSS13Q9BYE2 586 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 TGIF2Q9GZN2 237 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 C20orf85Q9H1P6 137 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 HPF1Q9NWY4 346 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 PIPOXQ9P0Z9 390 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 NTMQ9P121 344 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 A0A087WV62 115 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 TCRBV16S1A1N1A0A5B0 115 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 IDSB3KWA1 339 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 PDCD5O14737 125 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 PRKNO60260 465 aaPredicted RBP12.49□□□□□ -0.41
COPS7B-221ENST00000488111 PRAF2O60831 178 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 UBL3O95164 117 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 SHC1P29353 583 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 TMEM44Q2T9K0 475 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 SLC30A6Q6NXT4 461 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 ATRAIDQ6UW56 229 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 HMGN2P46Q86SG4 172 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 OR5T2Q8NGG2 359 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 ADAMTS15Q8TE58 950 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 RFKQ969G6 155 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 SLC35A4Q96G79 324 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 FNDC11Q9BVV2 318 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 FOXJ2Q9P0K8 574 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 CHST2Q9Y4C5 530 aa12.49□□□□□ -0.41
COPS7B-221ENST00000488111 VSTM2BA6NLU5 285 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms