RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 SSMEM1Q8WWF3 244 aa4.82□□□□□ -1.64
COL4A3-206ENST00000487633 CNOT9Q92600 299 aaKnown RBP4.82□□□□□ -1.64
COL4A3-206ENST00000487633 MRRFQ96E11 262 aaKnown RBP4.82□□□□□ -1.64
COL4A3-206ENST00000487633 ELMOD3Q96FG2 381 aa4.82□□□□□ -1.64
COL4A3-206ENST00000487633 FAM71F1Q96KD3 344 aaPredicted RBP4.82□□□□□ -1.64
COL4A3-206ENST00000487633 OR7D2Q96RA2 312 aa4.82□□□□□ -1.64
COL4A3-206ENST00000487633 PRPF18Q99633 342 aaKnown RBP4.82□□□□□ -1.64
COL4A3-206ENST00000487633 CPNE1Q99829 537 aa4.82□□□□□ -1.64
COL4A3-206ENST00000487633 EMC6Q9BV81 110 aa4.82□□□□□ -1.64
COL4A3-206ENST00000487633 LINC00470Q9BZP3 86 aa4.82□□□□□ -1.64
COL4A3-206ENST00000487633 PPA2Q9H2U2 334 aa4.82□□□□□ -1.64
COL4A3-206ENST00000487633 GRPEL1Q9HAV7 217 aa4.82□□□□□ -1.64
COL4A3-206ENST00000487633 TMEM165Q9HC07 324 aa4.82□□□□□ -1.64
COL4A3-206ENST00000487633 MSL2Q9HCI7 577 aa4.82□□□□□ -1.64
COL4A3-206ENST00000487633 MIEF1Q9NQG6 463 aa4.82□□□□□ -1.64
COL4A3-206ENST00000487633 ADPRHL2Q9NX46 363 aa4.82□□□□□ -1.64
COL4A3-206ENST00000487633 GRHL1Q9NZI5 618 aa4.82□□□□□ -1.64
COL4A3-206ENST00000487633 SLC17A7Q9P2U7 560 aa4.82□□□□□ -1.64
COL4A3-206ENST00000487633 ZNF346Q9UL40 294 aaKnown RBP4.82□□□□□ -1.64
COL4A3-206ENST00000487633 NOX1Q9Y5S8 564 aa4.82□□□□□ -1.64
COL4A3-206ENST00000487633 SYCE1LA8MT33 242 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 ZNF99A8MXY4 864 aaPredicted RBP4.81□□□□□ -1.64
COL4A3-206ENST00000487633 KLHL2O95198 593 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 TGDSO95455 350 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 LCKP06239 509 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 CHRM4P08173 479 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 INHBAP08476 426 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 CCDC159P0C7I6 412 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 VSIG10L2P0DP72 767 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 HLA-DOBP13765 273 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 HOXB1P14653 301 aaPredicted RBP4.81□□□□□ -1.64
COL4A3-206ENST00000487633 CFHR2P36980 270 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 ETV4P43268 484 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 ZNF81P51508 661 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 KLF3P57682 345 aaPredicted RBP4.81□□□□□ -1.64
COL4A3-206ENST00000487633 RPL15P61313 204 aaKnown RBP4.81□□□□□ -1.64
COL4A3-206ENST00000487633 BTG1P62324 171 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 EGFEM1PQ0D2K5 195 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 COX10Q12887 443 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 MFSD13AQ14CX5 517 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 KIAA0040Q15053 153 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 PPP1R7Q15435 360 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 ZNF141Q15928 474 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 PCGF3Q3KNV8 242 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 VPS26BQ4G0F5 336 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 RUNDC3AQ59EK9 446 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 NOXRED1Q6NXP6 359 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 LRRN1Q6UXK5 716 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 ZNF841Q6ZN19 808 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 Q6ZR03 302 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 MEPCEQ7L2J0 689 aaKnown RBP4.81□□□□□ -1.64
COL4A3-206ENST00000487633 RNF130Q86XS8 419 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 LDLRAD3Q86YD5 345 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 KLBQ86Z14 1044 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 ZNF101Q8IZC7 436 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 TMEM123Q8N131 208 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 FGFRL1Q8N441 504 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 PNKDQ8N490 385 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 C19orf18Q8NEA5 215 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 IL17RDQ8NFM7 739 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 OR5AK3PQ8NH89 298 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 ZNF420Q8TAQ5 688 aaPredicted RBP4.81□□□□□ -1.64
COL4A3-206ENST00000487633 WIPF2Q8TF74 440 aaPredicted RBP4.81□□□□□ -1.64
COL4A3-206ENST00000487633 C10orf82Q8WW14 230 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 C17orf50Q8WW18 174 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 IPCEF1Q8WWN9 437 aaPredicted RBP4.81□□□□□ -1.64
COL4A3-206ENST00000487633 TMEM234Q8WY98 164 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 STACQ99469 402 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 ARHGDIGQ99819 225 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 BAG1Q99933 345 aaPredicted RBP4.81□□□□□ -1.64
COL4A3-206ENST00000487633 OCSTAMPQ9BR26 566 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 NUDT16L1Q9BRJ7 211 aaKnown RBP4.81□□□□□ -1.64
COL4A3-206ENST00000487633 NAA11Q9BSU3 229 aaPredicted RBP4.81□□□□□ -1.64
COL4A3-206ENST00000487633 SF3B5Q9BWJ5 86 aaKnown RBP4.81□□□□□ -1.64
COL4A3-206ENST00000487633 SSBP3Q9BWW4 388 aaPredicted RBP4.81□□□□□ -1.64
COL4A3-206ENST00000487633 DUSP22Q9NRW4 184 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 ZCCHC3Q9NUD5 404 aaKnown RBP4.81□□□□□ -1.64
COL4A3-206ENST00000487633 TMEM106BQ9NUM4 274 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 ACOXLQ9NUZ1 547 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 SIRT5Q9NXA8 310 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 FBLN5Q9UBX5 448 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 NKX1-2Q9UD57 310 aaPredicted RBP4.81□□□□□ -1.64
COL4A3-206ENST00000487633 OR5V1Q9UGF6 321 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 BAIAP2L1Q9UHR4 511 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 SNX6Q9UNH7 406 aa4.81□□□□□ -1.64
COL4A3-206ENST00000487633 IGHV3-64DA0A0J9YX35 117 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 A0A1W2PRD5 423 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 A0A1W2PRF3 423 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 A0A1W2PRM7 423 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 A0A1W2PRX2 142 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 CCDC189A1A4V9 331 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 A8MT66 165 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 H3BNH8 94 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 STX16-NPEPL1H3BU86 382 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 STX16O14662 325 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 EIF1BO60739 113 aaKnown RBP4.8□□□□□ -1.64
COL4A3-206ENST00000487633 SCN2BO60939 215 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 HPRP00739 348 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 IGHV3-13P01766 116 aa4.8□□□□□ -1.64
COL4A3-206ENST00000487633 MT-ND5P03915 603 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms