RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 IFNA2P01563 188 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 IL12BP29460 328 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 KRT20P35900 424 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 CHI3L1P36222 383 aaPredicted RBP5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 MAGEA5P43359 124 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 RFX3P48380 749 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 TMED10P49755 219 aaKnown RBP5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 TDGF1P3P51864 188 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 PPIAP62937 165 aaKnown RBP5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 KCNJ2P63252 427 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 LRRC74AQ0VAA2 488 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 FUT5Q11128 374 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 MAPK11Q15759 364 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 INAQ16352 499 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 HYAL4Q2M3T9 481 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 ARHGAP11BQ3KRB8 267 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 CMPK2Q5EBM0 449 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 DCST2Q5T1A1 773 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 LRIF1Q5T3J3 769 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 AP1ARQ63HQ0 302 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 SLC30A6Q6NXT4 461 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 BHLHB9Q6PI77 547 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 SLC16A12Q6ZSM3 486 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 MSANTD1Q6ZTZ1 278 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 MARCH3Q86UD3 253 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 CHERPQ8IWX8 916 aaKnown RBP5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 C10orf111Q8N326 155 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 TMEM251Q8N6I4 163 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 POGLUT1Q8NBL1 392 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 CHDHQ8NE62 594 aaPredicted RBP5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 PNPT1Q8TCS8 783 aaKnown RBP5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 NR4A3Q92570 626 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 MOAP1Q96BY2 351 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 TMCO6Q96DC7 493 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 JSRP1Q96MG2 331 aaPredicted RBP5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 WDFY2Q96P53 400 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 CCT8L2Q96SF2 557 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 SDF2Q99470 211 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 SLX1AQ9BQ83 275 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 KLHDC3Q9BQ90 382 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 DOHHQ9BU89 302 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 CCDC106Q9BWC9 280 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 RSPO3Q9BXY4 272 aaPredicted RBP5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 POLDIP3Q9BY77 421 aaKnown RBP5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 TTTY12Q9BZ98 90 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 DEFB127Q9H1M4 99 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 RMND5AQ9H871 391 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 TPT1P8Q9HAU6 139 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 IL1RL2Q9HB29 575 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 OLAHQ9NV23 265 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 NDRG3Q9UGV2 375 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 NPIPA1Q9UND3 350 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 NDUFAF1Q9Y375 327 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 SHANK1Q9Y566 2161 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 A0A096LPI6 279 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 NPIPA5A0A0B4J1W7 369 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 TMEM272A0A1B0GTI8 110 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 LIPT2A6NK58 231 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 DUXAA6NLW8 204 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 NPIPA7E9PJI5 369 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 NPIPB9F8W1W9 429 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 SEC14L5O43304 696 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 ZIC3O60481 467 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 PAGE4O60829 102 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 SHOX2O60902 331 aaPredicted RBP5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 SOX30O94993 753 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 KRT75O95678 551 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 OXSR1O95747 527 aaPredicted RBP5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 ANGPTL1O95841 491 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 CRYABP02511 175 aaKnown RBP5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 TFPTP0C1Z6 253 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 NPIPA8P0DM63 369 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 ETFAP13804 333 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 ZNF24P17028 368 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 TBXA2RP21731 343 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 GNLYP22749 145 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 EVI2BP34910 448 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 CRATP43155 626 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 UQCRFS1P47985 274 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 PSPHP78330 225 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 PLGLB1Q02325 96 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 SNTA1Q13424 505 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 SELPLGQ14242 412 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 FGFBP1Q14512 234 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 SLC10A1Q14973 349 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 RGNQ15493 299 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 MAPK14Q16539 360 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 SYPL1Q16563 259 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 EIF2S3LQ2VIR3 472 aaKnown RBP5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 KLHL26Q53HC5 615 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 KRTCAP3Q53RY4 240 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 TIGD3Q6B0B8 471 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 ANGPTL8Q6UXH0 198 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 NOXA1Q86UR1 476 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 TRIML2Q8N7C3 387 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 COX18Q8N8Q8 333 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 ANKFN1Q8N957 763 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 OR1J4Q8NGS1 313 aa5.54□□□□□ -1.52
RTFDC1-209ENST00000487211 MPLKIPQ8TAP9 179 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms