RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 CACNG6Q9BXT2 260 aa4.93□□□□□ -1.62
COPS3-209ENST00000486810 IL22Q9GZX6 179 aa4.93□□□□□ -1.62
COPS3-209ENST00000486810 TMEM38AQ9H6F2 299 aa4.93□□□□□ -1.62
COPS3-209ENST00000486810 FKRPQ9H9S5 495 aa4.93□□□□□ -1.62
COPS3-209ENST00000486810 SLCO1B3Q9NPD5 702 aa4.93□□□□□ -1.62
COPS3-209ENST00000486810 G6PC2Q9NQR9 355 aa4.93□□□□□ -1.62
COPS3-209ENST00000486810 SPHK2Q9NRA0 654 aa4.93□□□□□ -1.62
COPS3-209ENST00000486810 RCC2Q9P258 522 aaKnown RBP4.93□□□□□ -1.62
COPS3-209ENST00000486810 PAK5Q9P286 719 aa4.93□□□□□ -1.62
COPS3-209ENST00000486810 TMEM181Q9P2C4 612 aa4.93□□□□□ -1.62
COPS3-209ENST00000486810 OPTCQ9UBM4 332 aa4.93□□□□□ -1.62
COPS3-209ENST00000486810 ARMCX3Q9UH62 379 aaPredicted RBP4.93□□□□□ -1.62
COPS3-209ENST00000486810 PITPNC1Q9UKF7 332 aa4.93□□□□□ -1.62
COPS3-209ENST00000486810 RNF6Q9Y252 685 aa4.93□□□□□ -1.62
COPS3-209ENST00000486810 EXOGQ9Y2C4 368 aaKnown RBP4.93□□□□□ -1.62
COPS3-209ENST00000486810 RHBDD3Q9Y3P4 386 aa4.93□□□□□ -1.62
COPS3-209ENST00000486810 MTCL1Q9Y4B5 1905 aaKnown RBP4.93□□□□□ -1.62
COPS3-209ENST00000486810 PPLO60437 1756 aa4.93□□□□□ -1.62
COPS3-209ENST00000486810 MROH1Q8NDA8 1641 aa4.93□□□□□ -1.62
COPS3-209ENST00000486810 ZNF638Q14966 1978 aaKnown RBP4.93□□□□□ -1.62
COPS3-209ENST00000486810 PHIPQ8WWQ0 1821 aa4.93□□□□□ -1.62
COPS3-209ENST00000486810 TOPBP1Q92547 1522 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 KIAA1551Q9HCM1 1747 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 UGGT1Q9NYU2 1555 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 A0A087WZY1 265 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 IGLV5-39A0A0G2JS06 123 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 TCRBV7S3A2A0A539 114 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 COLCA2A8K830 154 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 B4DXG7 233 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 TRIM49D1C9J1S8 452 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 ARPC3O15145 178 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 CHADO15335 359 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 TGOLN2O43493 480 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 TCF21O43680 179 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 TYROBPO43914 113 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 SAP30O75446 220 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 BRI3O95415 125 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 TTC4O95801 387 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 FADS2O95864 444 aaKnown RBP4.92□□□□□ -1.62
COPS3-209ENST00000486810 RPN2P04844 631 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 NMBP08949 121 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 OR56A5P0C7T3 313 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 C1GALT1C1LP0DN25 315 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 CETPP11597 493 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 ZNF44P15621 663 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 TSPAN8P19075 237 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 CSNK2A2P19784 350 aaPredicted RBP4.92□□□□□ -1.62
COPS3-209ENST00000486810 TBPP20226 339 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 ANOS1P23352 680 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 S100A2P29034 98 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 CEACAM8P31997 349 aaPredicted RBP4.92□□□□□ -1.62
COPS3-209ENST00000486810 ARL3P36405 182 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 AKR1C3P42330 323 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 RPL14P50914 215 aaKnown RBP4.92□□□□□ -1.62
COPS3-209ENST00000486810 NOVA1P51513 510 aaKnown RBP4.92□□□□□ -1.62
COPS3-209ENST00000486810 CLDN18P56856 261 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 BTG1P62324 171 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 SIGLEC14Q08ET2 396 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 SKP2Q13309 424 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 PNOCQ13519 176 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 SLC10A1Q14973 349 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 SHHQ15465 462 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 OR4D1Q15615 310 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 DUOXA1Q1HG43 343 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 ASTE1Q2TB18 679 aaPredicted RBP4.92□□□□□ -1.62
COPS3-209ENST00000486810 SMIM21Q3B7S5 101 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 PIGGQ5H8A4 983 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 REEP3Q6NUK4 255 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 UNQ9370/PRO34162Q6UXP9 181 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 CASP12Q6UXS9 341 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 LANCL3Q6ZV70 420 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 SSX7Q7RTT5 188 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 RNF144BQ7Z419 303 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 TSPAN33Q86UF1 283 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 CCDC190Q86UF4 302 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 NAXDQ8IW45 347 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 BAP18Q8IXM2 172 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 ZNF100Q8IYN0 542 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 HS3ST5Q8IZT8 346 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 PTGR2Q8N8N7 351 aaPredicted RBP4.92□□□□□ -1.62
COPS3-209ENST00000486810 TMEM161BQ8NDZ6 487 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 OR52E1Q8NGJ3 308 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 OR4A15Q8NGL6 344 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 OR9Q1Q8NGQ5 310 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 OR8U1Q8NH10 309 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 OR4C6Q8NH72 309 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 OR4S2Q8NH73 311 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 SPPL2BQ8TCT7 592 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 RXFP4Q8TDU9 374 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 DUSP19Q8WTR2 217 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 ABHD3Q8WU67 409 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 ORAOV1Q8WV07 137 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 THAP4Q8WY91 577 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 ARNTL2Q8WYA1 636 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 SLC25A28Q96A46 364 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 YIPF6Q96EC8 236 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 MOCOSQ96EN8 888 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 OTUB1Q96FW1 271 aaPredicted RBP4.92□□□□□ -1.62
COPS3-209ENST00000486810 CERS2Q96G23 380 aa4.92□□□□□ -1.62
COPS3-209ENST00000486810 RNF157Q96PX1 679 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms