RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 ARHGAP24Q8N264 748 aa15.98■□□□□ 0.15
COL1A1-207ENST00000486572 LIPHQ8WWY8 451 aa15.98■□□□□ 0.15
COL1A1-207ENST00000486572 TXNDC15Q96J42 360 aa15.98■□□□□ 0.15
COL1A1-207ENST00000486572 TMEM204Q9BSN7 226 aa15.98■□□□□ 0.15
COL1A1-207ENST00000486572 EMC6Q9BV81 110 aa15.98■□□□□ 0.15
COL1A1-207ENST00000486572 SLC17A5Q9NRA2 495 aa15.98■□□□□ 0.15
COL1A1-207ENST00000486572 ITGB1BP2Q9UKP3 347 aa15.98■□□□□ 0.15
COL1A1-207ENST00000486572 PLEKHA6Q9Y2H5 1048 aa15.98■□□□□ 0.15
COL1A1-207ENST00000486572 AMDHD2Q9Y303 409 aa15.98■□□□□ 0.15
COL1A1-207ENST00000486572 SLC25A15Q9Y619 301 aa15.98■□□□□ 0.15
COL1A1-207ENST00000486572 V9GYQ6 96 aa15.98■□□□□ 0.15
COL1A1-207ENST00000486572 OTOGQ6ZRI0 2925 aa15.98■□□□□ 0.15
COL1A1-207ENST00000486572 A0A1W2PR80 420 aa15.97■□□□□ 0.15
COL1A1-207ENST00000486572 SLC35F4A4IF30 521 aa15.97■□□□□ 0.15
COL1A1-207ENST00000486572 BLOC1S5-TXNDC5H3BN57 136 aa15.97■□□□□ 0.15
COL1A1-207ENST00000486572 RPL36A-HNRNPH2H7BZ11 118 aa15.97■□□□□ 0.15
COL1A1-207ENST00000486572 IFI30P13284 250 aa15.97■□□□□ 0.15
COL1A1-207ENST00000486572 IFNGR1P15260 489 aa15.97■□□□□ 0.15
COL1A1-207ENST00000486572 DNASE1P24855 282 aa15.97■□□□□ 0.15
COL1A1-207ENST00000486572 IST1P53990 364 aa15.97■□□□□ 0.15
COL1A1-207ENST00000486572 SH3BGRP55822 239 aaPredicted RBP15.97■□□□□ 0.15
COL1A1-207ENST00000486572 KEAP1Q14145 624 aa15.97■□□□□ 0.15
COL1A1-207ENST00000486572 C1QTNF12Q5T7M4 302 aa15.97■□□□□ 0.15
COL1A1-207ENST00000486572 CARD17Q5XLA6 110 aa15.97■□□□□ 0.15
COL1A1-207ENST00000486572 OR1K1Q8NGR3 316 aa15.97■□□□□ 0.15
COL1A1-207ENST00000486572 ACOT11Q8WXI4 607 aaPredicted RBP15.97■□□□□ 0.15
COL1A1-207ENST00000486572 BPIFA2Q96DR5 249 aa15.97■□□□□ 0.15
COL1A1-207ENST00000486572 PYURFQ96I23 114 aa15.97■□□□□ 0.15
COL1A1-207ENST00000486572 BOD1Q96IK1 185 aa15.97■□□□□ 0.15
COL1A1-207ENST00000486572 C7orf34Q96L11 122 aa15.97■□□□□ 0.15
COL1A1-207ENST00000486572 ANKRD19PQ9H560 264 aa15.97■□□□□ 0.15
COL1A1-207ENST00000486572 UBTD1Q9HAC8 227 aa15.97■□□□□ 0.15
COL1A1-207ENST00000486572 NPAP1Q9NZP6 1156 aa15.97■□□□□ 0.15
COL1A1-207ENST00000486572 NDUFAF4Q9P032 175 aa15.97■□□□□ 0.15
COL1A1-207ENST00000486572 FAM32AQ9Y421 112 aaKnown RBP15.97■□□□□ 0.15
COL1A1-207ENST00000486572 RNF115Q9Y4L5 304 aa15.97■□□□□ 0.15
COL1A1-207ENST00000486572 AKAP6Q13023 2319 aa15.97■□□□□ 0.15
COL1A1-207ENST00000486572 ZNF726A6NNF4 738 aa15.96■□□□□ 0.15
COL1A1-207ENST00000486572 hCG_2039718K7EN88 272 aa15.96■□□□□ 0.15
COL1A1-207ENST00000486572 ATE1O95260 518 aa15.96■□□□□ 0.15
COL1A1-207ENST00000486572 CD3EP07766 207 aa15.96■□□□□ 0.15
COL1A1-207ENST00000486572 RHCEP18577 417 aa15.96■□□□□ 0.15
COL1A1-207ENST00000486572 BIDP55957 195 aa15.96■□□□□ 0.15
COL1A1-207ENST00000486572 LSM11P83369 360 aaKnown RBP eCLIP15.96■□□□□ 0.15
COL1A1-207ENST00000486572 VLDLRP98155 873 aa15.96■□□□□ 0.15
COL1A1-207ENST00000486572 RPL18Q07020 188 aaKnown RBP15.96■□□□□ 0.15
COL1A1-207ENST00000486572 BSPH1Q075Z2 132 aa15.96■□□□□ 0.15
COL1A1-207ENST00000486572 HIKESHIQ53FT3 197 aa15.96■□□□□ 0.15
COL1A1-207ENST00000486572 KLHL24Q6TFL4 600 aa15.96■□□□□ 0.15
COL1A1-207ENST00000486572 ZNF730Q6ZMV8 503 aa15.96■□□□□ 0.15
COL1A1-207ENST00000486572 SLC35D2Q76EJ3 337 aa15.96■□□□□ 0.15
COL1A1-207ENST00000486572 NRMQ8IXM6 262 aa15.96■□□□□ 0.15
COL1A1-207ENST00000486572 C20orf196Q8IYI0 205 aa15.96■□□□□ 0.15
COL1A1-207ENST00000486572 RNF113BQ8IZP6 322 aaKnown RBP15.96■□□□□ 0.15
COL1A1-207ENST00000486572 WDR31Q8NA23 367 aa15.96■□□□□ 0.15
COL1A1-207ENST00000486572 LRR1Q96L50 414 aa15.96■□□□□ 0.15
COL1A1-207ENST00000486572 ADAD1Q96M93 576 aaKnown RBP15.96■□□□□ 0.15
COL1A1-207ENST00000486572 C1orf21Q9H246 121 aa15.96■□□□□ 0.15
COL1A1-207ENST00000486572 NMNAT1Q9HAN9 279 aaPredicted RBP15.96■□□□□ 0.15
COL1A1-207ENST00000486572 CRLF2Q9HC73 371 aa15.96■□□□□ 0.15
COL1A1-207ENST00000486572 GPR35Q9HC97 309 aa15.96■□□□□ 0.15
COL1A1-207ENST00000486572 B3GAT2Q9NPZ5 323 aa15.96■□□□□ 0.15
COL1A1-207ENST00000486572 CCM2LQ9NUG4 571 aaPredicted RBP15.96■□□□□ 0.15
COL1A1-207ENST00000486572 PRPF19Q9UMS4 504 aaKnown RBP15.96■□□□□ 0.15
COL1A1-207ENST00000486572 MAGED1Q9Y5V3 778 aaPredicted RBP15.96■□□□□ 0.15
COL1A1-207ENST00000486572 PRR14LQ5THK1 2151 aa15.95■□□□□ 0.14
COL1A1-207ENST00000486572 A0A087WUU8 490 aa15.95■□□□□ 0.14
COL1A1-207ENST00000486572 DPRXA6NFQ7 191 aa15.95■□□□□ 0.14
COL1A1-207ENST00000486572 M0R3G1 203 aa15.95■□□□□ 0.14
COL1A1-207ENST00000486572 CLOCKO15516 846 aa15.95■□□□□ 0.14
COL1A1-207ENST00000486572 PLAUP00749 431 aa15.95■□□□□ 0.14
COL1A1-207ENST00000486572 SEMG1P04279 462 aa15.95■□□□□ 0.14
COL1A1-207ENST00000486572 H1F0P07305 194 aaKnown RBP15.95■□□□□ 0.14
COL1A1-207ENST00000486572 ITGA2P17301 1181 aa15.95■□□□□ 0.14
COL1A1-207ENST00000486572 PRPS1P60891 318 aa15.95■□□□□ 0.14
COL1A1-207ENST00000486572 CAMK2DQ13557 499 aa15.95■□□□□ 0.14
COL1A1-207ENST00000486572 ACKR1Q16570 336 aa15.95■□□□□ 0.14
COL1A1-207ENST00000486572 CEACAM16Q2WEN9 425 aa15.95■□□□□ 0.14
COL1A1-207ENST00000486572 TBRG1Q3YBR2 411 aa15.95■□□□□ 0.14
COL1A1-207ENST00000486572 KLHL17Q6TDP4 642 aa15.95■□□□□ 0.14
COL1A1-207ENST00000486572 TMEM108Q6UXF1 575 aa15.95■□□□□ 0.14
COL1A1-207ENST00000486572 WDFY1Q8IWB7 410 aa15.95■□□□□ 0.14
COL1A1-207ENST00000486572 OR6N1Q8NGY5 312 aa15.95■□□□□ 0.14
COL1A1-207ENST00000486572 OR6X1Q8NH79 312 aa15.95■□□□□ 0.14
COL1A1-207ENST00000486572 OBP2BQ9NPH6 170 aa15.95■□□□□ 0.14
COL1A1-207ENST00000486572 ACTR3BQ9P1U1 418 aa15.95■□□□□ 0.14
COL1A1-207ENST00000486572 A0A1W2PRG6 482 aa15.94■□□□□ 0.14
COL1A1-207ENST00000486572 A0A1W2PRQ8 180 aa15.94■□□□□ 0.14
COL1A1-207ENST00000486572 WNT11O96014 354 aa15.94■□□□□ 0.14
COL1A1-207ENST00000486572 TSPAN19P0C672 248 aa15.94■□□□□ 0.14
COL1A1-207ENST00000486572 SAGP10523 405 aaPredicted RBP15.94■□□□□ 0.14
COL1A1-207ENST00000486572 AQP2P41181 271 aa15.94■□□□□ 0.14
COL1A1-207ENST00000486572 CSNK1A1P48729 337 aa15.94■□□□□ 0.14
COL1A1-207ENST00000486572 ZNF83P51522 516 aa15.94■□□□□ 0.14
COL1A1-207ENST00000486572 PRKCDQ05655 676 aa15.94■□□□□ 0.14
COL1A1-207ENST00000486572 DGCR6Q14129 220 aa15.94■□□□□ 0.14
COL1A1-207ENST00000486572 MELKQ14680 651 aa15.94■□□□□ 0.14
COL1A1-207ENST00000486572 FGD3Q5JSP0 725 aa15.94■□□□□ 0.14
COL1A1-207ENST00000486572 PHYHD1Q5SRE7 291 aa15.94■□□□□ 0.14
COL1A1-207ENST00000486572 ANKRD16Q6P6B7 361 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms