RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 TYW3Q6IPR3 259 aaKnown RBP12.73□□□□□ -0.37
U2AF1-211ENST00000486519 R3HCC1LQ7Z5L2 792 aaKnown RBP12.73□□□□□ -0.37
U2AF1-211ENST00000486519 CMIPQ8IY22 773 aa12.73□□□□□ -0.37
U2AF1-211ENST00000486519 C11orf44Q8N8P7 122 aa12.73□□□□□ -0.37
U2AF1-211ENST00000486519 SYNPRQ8TBG9 265 aa12.73□□□□□ -0.37
U2AF1-211ENST00000486519 GEMIN6Q8WXD5 167 aaKnown RBP12.73□□□□□ -0.37
U2AF1-211ENST00000486519 PMM1Q92871 262 aa12.73□□□□□ -0.37
U2AF1-211ENST00000486519 DACT3Q96B18 629 aaPredicted RBP12.73□□□□□ -0.37
U2AF1-211ENST00000486519 ELMOD3Q96FG2 381 aa12.73□□□□□ -0.37
U2AF1-211ENST00000486519 MARS2Q96GW9 593 aaKnown RBP12.73□□□□□ -0.37
U2AF1-211ENST00000486519 IQCGQ9H095 443 aaKnown RBP12.73□□□□□ -0.37
U2AF1-211ENST00000486519 B3GAT1Q9P2W7 334 aa12.73□□□□□ -0.37
U2AF1-211ENST00000486519 SLC7A8Q9UHI5 535 aa12.73□□□□□ -0.37
U2AF1-211ENST00000486519 PPP2R2CQ9Y2T4 447 aa12.73□□□□□ -0.37
U2AF1-211ENST00000486519 M0R3G1 203 aa12.72□□□□□ -0.37
U2AF1-211ENST00000486519 TM9SF1O15321 606 aa12.72□□□□□ -0.37
U2AF1-211ENST00000486519 IGHV4-59P01825 116 aa12.72□□□□□ -0.37
U2AF1-211ENST00000486519 UROSP10746 265 aa12.72□□□□□ -0.37
U2AF1-211ENST00000486519 B4GALT1P15291 398 aa12.72□□□□□ -0.37
U2AF1-211ENST00000486519 PKNOX1P55347 436 aa12.72□□□□□ -0.37
U2AF1-211ENST00000486519 EGR3Q06889 387 aa12.72□□□□□ -0.37
U2AF1-211ENST00000486519 GPR137CQ8N3F9 429 aa12.72□□□□□ -0.37
U2AF1-211ENST00000486519 ARFGAP2Q8N6H7 521 aa12.72□□□□□ -0.37
U2AF1-211ENST00000486519 ZSCAN4Q8NAM6 433 aaPredicted RBP12.72□□□□□ -0.37
U2AF1-211ENST00000486519 OR56A1Q8NGH5 318 aa12.72□□□□□ -0.37
U2AF1-211ENST00000486519 SNX33Q8WV41 574 aa12.72□□□□□ -0.37
U2AF1-211ENST00000486519 SLC47A1Q96FL8 570 aa12.72□□□□□ -0.37
U2AF1-211ENST00000486519 OR2M2Q96R28 347 aa12.72□□□□□ -0.37
U2AF1-211ENST00000486519 PRPF18Q99633 342 aaKnown RBP12.72□□□□□ -0.37
U2AF1-211ENST00000486519 LYSTQ99698 3801 aa12.72□□□□□ -0.37
U2AF1-211ENST00000486519 CCT7Q99832 543 aa12.72□□□□□ -0.37
U2AF1-211ENST00000486519 TMEM216Q9P0N5 145 aa12.72□□□□□ -0.37
U2AF1-211ENST00000486519 SLC35A3Q9Y2D2 325 aa12.72□□□□□ -0.37
U2AF1-211ENST00000486519 NPTNQ9Y639 398 aa12.72□□□□□ -0.37
U2AF1-211ENST00000486519 ZSCAN5BA6NJL1 495 aa12.71□□□□□ -0.37
U2AF1-211ENST00000486519 IMPDH1P20839 514 aa12.71□□□□□ -0.37
U2AF1-211ENST00000486519 RAB1AP62820 205 aa12.71□□□□□ -0.37
U2AF1-211ENST00000486519 CHI3L2Q15782 390 aa12.71□□□□□ -0.37
U2AF1-211ENST00000486519 ARHGAP11BQ3KRB8 267 aa12.71□□□□□ -0.37
U2AF1-211ENST00000486519 SPDYE7PQ495Y7 208 aa12.71□□□□□ -0.37
U2AF1-211ENST00000486519 RFTN2Q52LD8 501 aaPredicted RBP12.71□□□□□ -0.37
U2AF1-211ENST00000486519 LIPMQ5VYY2 423 aa12.71□□□□□ -0.37
U2AF1-211ENST00000486519 CARD17Q5XLA6 110 aa12.71□□□□□ -0.37
U2AF1-211ENST00000486519 ZNF813Q6ZN06 617 aa12.71□□□□□ -0.37
U2AF1-211ENST00000486519 LRRC8AQ8IWT6 810 aa12.71□□□□□ -0.37
U2AF1-211ENST00000486519 C1orf174Q8IYL3 243 aa12.71□□□□□ -0.37
U2AF1-211ENST00000486519 TMEM123Q8N131 208 aa12.71□□□□□ -0.37
U2AF1-211ENST00000486519 ANKK1Q8NFD2 765 aa12.71□□□□□ -0.37
U2AF1-211ENST00000486519 PSMA8Q8TAA3 256 aa12.71□□□□□ -0.37
U2AF1-211ENST00000486519 FBXO25Q8TCJ0 367 aa12.71□□□□□ -0.37
U2AF1-211ENST00000486519 MGARPQ8TDB4 240 aa12.71□□□□□ -0.37
U2AF1-211ENST00000486519 NEURL3Q96EH8 262 aa12.71□□□□□ -0.37
U2AF1-211ENST00000486519 DIRC2Q96SL1 478 aa12.71□□□□□ -0.37
U2AF1-211ENST00000486519 EXOSC3Q9NQT5 275 aaKnown RBP12.71□□□□□ -0.37
U2AF1-211ENST00000486519 TRIM33Q9UPN9 1127 aa12.71□□□□□ -0.37
U2AF1-211ENST00000486519 PRAMEF27A3QJZ7 478 aa12.7□□□□□ -0.38
U2AF1-211ENST00000486519 C1QCP02747 245 aa12.7□□□□□ -0.38
U2AF1-211ENST00000486519 HTR3AP46098 478 aa12.7□□□□□ -0.38
U2AF1-211ENST00000486519 ZNF81P51508 661 aa12.7□□□□□ -0.38
U2AF1-211ENST00000486519 ETF1P62495 437 aaKnown RBP12.7□□□□□ -0.38
U2AF1-211ENST00000486519 KCNJ10P78508 379 aa12.7□□□□□ -0.38
U2AF1-211ENST00000486519 FAM205BPQ63HN1 556 aa12.7□□□□□ -0.38
U2AF1-211ENST00000486519 FRRS1Q6ZNA5 592 aa12.7□□□□□ -0.38
U2AF1-211ENST00000486519 CCDC36Q8IYA8 594 aa12.7□□□□□ -0.38
U2AF1-211ENST00000486519 LYG1Q8N1E2 194 aa12.7□□□□□ -0.38
U2AF1-211ENST00000486519 TMEM86BQ8N661 226 aa12.7□□□□□ -0.38
U2AF1-211ENST00000486519 DYRK2Q92630 601 aa12.7□□□□□ -0.38
U2AF1-211ENST00000486519 NOX4Q9NPH5 578 aa12.7□□□□□ -0.38
U2AF1-211ENST00000486519 OR5V1Q9UGF6 321 aa12.7□□□□□ -0.38
U2AF1-211ENST00000486519 IGHV2-70DA0A0C4DH43 119 aa12.69□□□□□ -0.38
U2AF1-211ENST00000486519 GPR37O15354 613 aa12.69□□□□□ -0.38
U2AF1-211ENST00000486519 LCKP06239 509 aa12.69□□□□□ -0.38
U2AF1-211ENST00000486519 KRT16P08779 473 aa12.69□□□□□ -0.38
U2AF1-211ENST00000486519 PPIAL4GP0DN37 164 aa12.69□□□□□ -0.38
U2AF1-211ENST00000486519 PNMTP11086 282 aa12.69□□□□□ -0.38
U2AF1-211ENST00000486519 MATN1P21941 496 aa12.69□□□□□ -0.38
U2AF1-211ENST00000486519 PRPH2P23942 346 aa12.69□□□□□ -0.38
U2AF1-211ENST00000486519 RPL38P63173 70 aaKnown RBP12.69□□□□□ -0.38
U2AF1-211ENST00000486519 MFSD13AQ14CX5 517 aa12.69□□□□□ -0.38
U2AF1-211ENST00000486519 ZMYND11Q15326 602 aa12.69□□□□□ -0.38
U2AF1-211ENST00000486519 CLEC6AQ6EIG7 209 aa12.69□□□□□ -0.38
U2AF1-211ENST00000486519 ZNF774Q6NX45 483 aa12.69□□□□□ -0.38
U2AF1-211ENST00000486519 CREG2Q8IUH2 290 aa12.69□□□□□ -0.38
U2AF1-211ENST00000486519 ICA1LQ8NDH6 482 aa12.69□□□□□ -0.38
U2AF1-211ENST00000486519 OR5P2Q8WZ92 322 aa12.69□□□□□ -0.38
U2AF1-211ENST00000486519 C16orf95Q9H693 158 aa12.69□□□□□ -0.38
U2AF1-211ENST00000486519 C1orf109Q9NX04 203 aa12.69□□□□□ -0.38
U2AF1-211ENST00000486519 GIMAP2Q9UG22 337 aa12.69□□□□□ -0.38
U2AF1-211ENST00000486519 ATP6V1HQ9UI12 483 aa12.69□□□□□ -0.38
U2AF1-211ENST00000486519 RASD1Q9Y272 281 aa12.69□□□□□ -0.38
U2AF1-211ENST00000486519 ZNF816-ZNF321PA0A0X1KG74 233 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 FTCDNL1E5RQL4 147 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 TGDSO95455 350 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 RAB36O95755 333 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 FUT4P22083 530 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 SOAT1P35610 550 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 MPV17P39210 176 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 MMP15P51511 669 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 PRKAA2P54646 552 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 PCBP3P57721 371 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms