RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 CD69Q07108 199 aa6.89□□□□□ -1.31
XRN1-212ENST00000486211 HERPUD1Q15011 391 aa6.89□□□□□ -1.31
XRN1-212ENST00000486211 TSTQ16762 297 aaKnown RBP6.89□□□□□ -1.31
XRN1-212ENST00000486211 CASC10Q5T4H9 136 aa6.89□□□□□ -1.31
XRN1-212ENST00000486211 GKAP1Q5VSY0 366 aaPredicted RBP6.89□□□□□ -1.31
XRN1-212ENST00000486211 PRAMEF8Q5VWM4 474 aa6.89□□□□□ -1.31
XRN1-212ENST00000486211 PRAMEF7Q5VXH5 474 aa6.89□□□□□ -1.31
XRN1-212ENST00000486211 NIPAL3Q6P499 406 aa6.89□□□□□ -1.31
XRN1-212ENST00000486211 EMBQ6PCB8 327 aa6.89□□□□□ -1.31
XRN1-212ENST00000486211 GPAT4Q86UL3 456 aa6.89□□□□□ -1.31
XRN1-212ENST00000486211 CFHR4Q92496 578 aa6.89□□□□□ -1.31
XRN1-212ENST00000486211 MISP3Q96FF7 219 aa6.89□□□□□ -1.31
XRN1-212ENST00000486211 CHMP6Q96FZ7 201 aa6.89□□□□□ -1.31
XRN1-212ENST00000486211 ZNF764Q96H86 408 aaPredicted RBP6.89□□□□□ -1.31
XRN1-212ENST00000486211 DIRC2Q96SL1 478 aa6.89□□□□□ -1.31
XRN1-212ENST00000486211 GPR35Q9HC97 309 aa6.89□□□□□ -1.31
XRN1-212ENST00000486211 DECR2Q9NUI1 292 aa6.89□□□□□ -1.31
XRN1-212ENST00000486211 ZNF224Q9NZL3 707 aa6.89□□□□□ -1.31
XRN1-212ENST00000486211 IL20RAQ9UHF4 553 aa6.89□□□□□ -1.31
XRN1-212ENST00000486211 PCDHGB4Q9UN71 923 aa6.89□□□□□ -1.31
XRN1-212ENST00000486211 POLR3HQ9Y535 204 aaPredicted RBP6.89□□□□□ -1.31
XRN1-212ENST00000486211 PCDHGB5Q9Y5G0 923 aa6.89□□□□□ -1.31
XRN1-212ENST00000486211 TMED7-TICAM2A0A0A6YYA0 188 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 ZNF816-ZNF321PA0A0X1KG74 233 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 PGRMC1O00264 195 aaKnown RBP6.88□□□□□ -1.31
XRN1-212ENST00000486211 TM9SF1O15321 606 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 TPD52L2O43399 206 aaKnown RBP6.88□□□□□ -1.31
XRN1-212ENST00000486211 ZNF500O60304 480 aaPredicted RBP6.88□□□□□ -1.31
XRN1-212ENST00000486211 SLC43A1O75387 559 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 UGT2B17O75795 530 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 IGHV4-59P01825 116 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 GSTT1P30711 240 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 HSD17B3P37058 310 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 CAPZA2P47755 286 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 KLF3P57682 345 aaPredicted RBP6.88□□□□□ -1.31
XRN1-212ENST00000486211 ERVS71-1P61550 626 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 GALK2Q01415 458 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 GUCY2DQ02846 1103 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 RASA2Q15283 850 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 MAPK14Q16539 360 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 GSG1Q2KHT4 349 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 CEACAM16Q2WEN9 425 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 SPRNQ5BIV9 151 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 DEFB121Q5J5C9 76 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 FAM209AQ5JX71 171 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 AP1ARQ63HQ0 302 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 RGS7BPQ6MZT1 257 aaPredicted RBP6.88□□□□□ -1.31
XRN1-212ENST00000486211 KLC3Q6P597 504 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 LRRN1Q6UXK5 716 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 OLIG3Q7RTU3 272 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 ZNF584Q8IVC4 421 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 CTAGE3PQ8IX95 158 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 C1orf174Q8IYL3 243 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 ZFP28Q8NHY6 868 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 ZNF563Q8TA94 476 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 STK35Q8TDR2 534 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 SNX33Q8WV41 574 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 DDIT4LQ96D03 193 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 SDF2Q99470 211 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 ACTRT3Q9BYD9 372 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 TOR3AQ9H497 397 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 ZCCHC3Q9NUD5 404 aaKnown RBP6.88□□□□□ -1.31
XRN1-212ENST00000486211 GPATCH2Q9NW75 528 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 OR5V1Q9UGF6 321 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 SLC7A8Q9UHI5 535 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 GPR160Q9UJ42 338 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 OSGIN1Q9UJX0 560 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 TMCO1Q9UM00 188 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 TMED7Q9Y3B3 224 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 NPTNQ9Y639 398 aa6.88□□□□□ -1.31
XRN1-212ENST00000486211 IGHV2-70DA0A0C4DH43 119 aa6.87□□□□□ -1.31
XRN1-212ENST00000486211 SLC22A23A1A5C7 686 aa6.87□□□□□ -1.31
XRN1-212ENST00000486211 ZNF99A8MXY4 864 aaPredicted RBP6.87□□□□□ -1.31
XRN1-212ENST00000486211 TNFRSF13BO14836 293 aaPredicted RBP6.87□□□□□ -1.31
XRN1-212ENST00000486211 MGRN1O60291 552 aa6.87□□□□□ -1.31
XRN1-212ENST00000486211 FCMRO60667 390 aa6.87□□□□□ -1.31
XRN1-212ENST00000486211 TBX19O60806 448 aa6.87□□□□□ -1.31
XRN1-212ENST00000486211 IGHV1-46P01743 117 aa6.87□□□□□ -1.31
XRN1-212ENST00000486211 SBK2P0C263 348 aa6.87□□□□□ -1.31
XRN1-212ENST00000486211 SBK3P0C264 359 aa6.87□□□□□ -1.31
XRN1-212ENST00000486211 OR8G3PP0DMU2 310 aa6.87□□□□□ -1.31
XRN1-212ENST00000486211 CD79AP11912 226 aa6.87□□□□□ -1.31
XRN1-212ENST00000486211 EFNA1P20827 205 aaPredicted RBP6.87□□□□□ -1.31
XRN1-212ENST00000486211 RYKP34925 604 aa6.87□□□□□ -1.31
XRN1-212ENST00000486211 BPIFB3P59826 476 aa6.87□□□□□ -1.31
XRN1-212ENST00000486211 CLCQ05315 142 aa6.87□□□□□ -1.31
XRN1-212ENST00000486211 PIGFQ07326 219 aa6.87□□□□□ -1.31
XRN1-212ENST00000486211 SLC3A1Q07837 685 aa6.87□□□□□ -1.31
XRN1-212ENST00000486211 PDE7AQ13946 482 aa6.87□□□□□ -1.31
XRN1-212ENST00000486211 CEACAM7Q14002 265 aa6.87□□□□□ -1.31
XRN1-212ENST00000486211 OR7A5Q15622 319 aa6.87□□□□□ -1.31
XRN1-212ENST00000486211 TMEM155Q4W5P6 130 aa6.87□□□□□ -1.31
XRN1-212ENST00000486211 TMEM255AQ5JRV8 349 aa6.87□□□□□ -1.31
XRN1-212ENST00000486211 CLEC6AQ6EIG7 209 aa6.87□□□□□ -1.31
XRN1-212ENST00000486211 ZNF774Q6NX45 483 aa6.87□□□□□ -1.31
XRN1-212ENST00000486211 NOXRED1Q6NXP6 359 aa6.87□□□□□ -1.31
XRN1-212ENST00000486211 Q6ZTK2 550 aa6.87□□□□□ -1.31
XRN1-212ENST00000486211 EIF3MQ7L2H7 374 aaKnown RBP6.87□□□□□ -1.31
XRN1-212ENST00000486211 DDIASQ8IXT1 998 aa6.87□□□□□ -1.31
XRN1-212ENST00000486211 PAQR4Q8N4S7 273 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms