RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 CSRP3P50461 194 aa4.57□□□□□ -1.68
RTN4-214ENST00000486085 DYNLT1P63172 113 aa4.57□□□□□ -1.68
RTN4-214ENST00000486085 ZNF85Q03923 595 aa4.57□□□□□ -1.68
RTN4-214ENST00000486085 ACVR1Q04771 509 aa4.57□□□□□ -1.68
RTN4-214ENST00000486085 ZNF235Q14590 738 aa4.57□□□□□ -1.68
RTN4-214ENST00000486085 TIMM50Q3ZCQ8 353 aa4.57□□□□□ -1.68
RTN4-214ENST00000486085 CARD16Q5EG05 197 aa4.57□□□□□ -1.68
RTN4-214ENST00000486085 EOGTQ5NDL2 527 aa4.57□□□□□ -1.68
RTN4-214ENST00000486085 C9orf64Q5T6V5 341 aa4.57□□□□□ -1.68
RTN4-214ENST00000486085 C8orf74Q6P047 294 aa4.57□□□□□ -1.68
RTN4-214ENST00000486085 LRRC8BQ6P9F7 803 aa4.57□□□□□ -1.68
RTN4-214ENST00000486085 TSEN54Q7Z6J9 526 aaKnown RBP4.57□□□□□ -1.68
RTN4-214ENST00000486085 SPEM1Q8N4L4 309 aa4.57□□□□□ -1.68
RTN4-214ENST00000486085 WDR36Q8NI36 951 aaKnown RBP4.57□□□□□ -1.68
RTN4-214ENST00000486085 FAM3CQ92520 227 aa4.57□□□□□ -1.68
RTN4-214ENST00000486085 ART4Q93070 314 aa4.57□□□□□ -1.68
RTN4-214ENST00000486085 SNF8Q96H20 258 aa4.57□□□□□ -1.68
RTN4-214ENST00000486085 CELF6Q96J87 481 aaKnown RBP4.57□□□□□ -1.68
RTN4-214ENST00000486085 RANBP9Q96S59 729 aa4.57□□□□□ -1.68
RTN4-214ENST00000486085 TMEM121Q9BTD3 319 aa4.57□□□□□ -1.68
RTN4-214ENST00000486085 CARD6Q9BX69 1037 aa4.57□□□□□ -1.68
RTN4-214ENST00000486085 ATG10Q9H0Y0 220 aa4.57□□□□□ -1.68
RTN4-214ENST00000486085 SLC7A10Q9NS82 523 aa4.57□□□□□ -1.68
RTN4-214ENST00000486085 RBM22Q9NW64 420 aaKnown RBP eCLIP4.57□□□□□ -1.68
RTN4-214ENST00000486085 QPCTLQ9NXS2 382 aa4.57□□□□□ -1.68
RTN4-214ENST00000486085 ZNF107Q9UII5 783 aaPredicted RBP4.57□□□□□ -1.68
RTN4-214ENST00000486085 FZR1Q9UM11 496 aa4.57□□□□□ -1.68
RTN4-214ENST00000486085 UTP11Q9Y3A2 253 aaKnown RBP4.57□□□□□ -1.68
RTN4-214ENST00000486085 RALGAPA1Q6GYQ0 2036 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 MIA3Q5JRA6 1907 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 LRIT2A6NDA9 550 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 SGK1O00141 431 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 KCNK1O00180 336 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 SSX5O60225 188 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 SDC3O75056 442 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 SPAG6O75602 509 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 TGFAP01135 160 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 JCHAINP01591 159 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 WNT2P09544 360 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 ZNF30P17039 623 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 PRDX2P32119 198 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 RABIFP47224 123 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 ATXN3P54252 364 aaPredicted RBP4.56□□□□□ -1.68
RTN4-214ENST00000486085 RHOAP61586 193 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 SARNPP82979 210 aaKnown RBP4.56□□□□□ -1.68
RTN4-214ENST00000486085 SRYQ05066 204 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 RAD51Q06609 339 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 ZNF33BQ06732 778 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 CDH17Q12864 832 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 PEX6Q13608 980 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 PRPSAP1Q14558 356 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 IHHQ14623 411 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 SLC10A1Q14973 349 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 CDKN3Q16667 212 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 Q1RN00 199 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 ACSF3Q4G176 576 aaPredicted RBP4.56□□□□□ -1.68
RTN4-214ENST00000486085 ATAD3CQ5T2N8 411 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 PDPK2PQ6A1A2 396 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 CNSTQ6PJW8 725 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 NLRP9Q7RTR0 991 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 IFT20Q8IY31 132 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 MREGQ8N565 214 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 DRAXINQ8NBI3 349 aaPredicted RBP4.56□□□□□ -1.68
RTN4-214ENST00000486085 OR2T3Q8NH03 318 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 PIH1D2Q8WWB5 315 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 OR8D1Q8WZ84 308 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 FCGR1BQ92637 280 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 PPP1R16AQ96I34 528 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 CAPZA3Q96KX2 299 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 IL22Q9GZX6 179 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 TIGARQ9NQ88 270 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 PRSS16Q9NQE7 514 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 RRAGDQ9NQL2 400 aaPredicted RBP4.56□□□□□ -1.68
RTN4-214ENST00000486085 HEBP1Q9NRV9 189 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 NAALAD2Q9Y3Q0 740 aa4.56□□□□□ -1.68
RTN4-214ENST00000486085 CACNA1EQ15878 2313 aa4.55□□□□□ -1.68
RTN4-214ENST00000486085 A0A0J9YYE9 177 aa4.55□□□□□ -1.68
RTN4-214ENST00000486085 C11orf98E9PRG8 122 aa4.55□□□□□ -1.68
RTN4-214ENST00000486085 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.55□□□□□ -1.68
RTN4-214ENST00000486085 M0QX08 132 aa4.55□□□□□ -1.68
RTN4-214ENST00000486085 PDLIM1O00151 329 aa4.55□□□□□ -1.68
RTN4-214ENST00000486085 PHOX2AO14813 284 aa4.55□□□□□ -1.68
RTN4-214ENST00000486085 TTC4O95801 387 aa4.55□□□□□ -1.68
RTN4-214ENST00000486085 TRBC1P01850 177 aa4.55□□□□□ -1.68
RTN4-214ENST00000486085 THY1P04216 161 aa4.55□□□□□ -1.68
RTN4-214ENST00000486085 UMPSP11172 480 aa4.55□□□□□ -1.68
RTN4-214ENST00000486085 TDGF1P13385 188 aa4.55□□□□□ -1.68
RTN4-214ENST00000486085 PVRP15151 417 aa4.55□□□□□ -1.68
RTN4-214ENST00000486085 CD9P21926 228 aa4.55□□□□□ -1.68
RTN4-214ENST00000486085 RGRP47804 291 aa4.55□□□□□ -1.68
RTN4-214ENST00000486085 STK19P49842 368 aaPredicted RBP4.55□□□□□ -1.68
RTN4-214ENST00000486085 CCNHP51946 323 aaPredicted RBP4.55□□□□□ -1.68
RTN4-214ENST00000486085 GABPB1Q06547 395 aaPredicted RBP4.55□□□□□ -1.68
RTN4-214ENST00000486085 BCL2L1Q07817 233 aa4.55□□□□□ -1.68
RTN4-214ENST00000486085 C2orf54Q08AI8 447 aa4.55□□□□□ -1.68
RTN4-214ENST00000486085 ELP6Q0PNE2 266 aa4.55□□□□□ -1.68
RTN4-214ENST00000486085 SNX1Q13596 522 aa4.55□□□□□ -1.68
RTN4-214ENST00000486085 PON2Q15165 354 aa4.55□□□□□ -1.68
RTN4-214ENST00000486085 PPP1R7Q15435 360 aa4.55□□□□□ -1.68
RTN4-214ENST00000486085 ZSWIM7Q19AV6 140 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms