RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 GMPR2Q9P2T1 348 aaKnown RBP15.43■□□□□ 0.06
COL6A1-204ENST00000486023 BAG5Q9UL15 447 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 RCE1Q9Y256 329 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 NIPBLQ6KC79 2804 aaeCLIP15.42■□□□□ 0.06
COL6A1-204ENST00000486023 SLC35F4A4IF30 521 aa15.42■□□□□ 0.06
COL6A1-204ENST00000486023 ATP6V1G2-DDX39BF2Z307 99 aa15.42■□□□□ 0.06
COL6A1-204ENST00000486023 OVOL3O00110 214 aa15.42■□□□□ 0.06
COL6A1-204ENST00000486023 PLPP3O14495 311 aa15.42■□□□□ 0.06
COL6A1-204ENST00000486023 RNF13O43567 381 aa15.42■□□□□ 0.06
COL6A1-204ENST00000486023 TRAF3IP2O43734 574 aaPredicted RBP15.42■□□□□ 0.06
COL6A1-204ENST00000486023 CCDC22O60826 627 aa15.42■□□□□ 0.06
COL6A1-204ENST00000486023 TTKP33981 857 aa15.42■□□□□ 0.06
COL6A1-204ENST00000486023 SEC24CP53992 1094 aa15.42■□□□□ 0.06
COL6A1-204ENST00000486023 CYBRD1Q53TN4 286 aa15.42■□□□□ 0.06
COL6A1-204ENST00000486023 ANKRD16Q6P6B7 361 aa15.42■□□□□ 0.06
COL6A1-204ENST00000486023 LINC00114Q6XXX2 140 aa15.42■□□□□ 0.06
COL6A1-204ENST00000486023 MUC15Q8N387 334 aa15.42■□□□□ 0.06
COL6A1-204ENST00000486023 SCAIQ8N9R8 606 aa15.42■□□□□ 0.06
COL6A1-204ENST00000486023 OR5J2Q8NH18 312 aa15.42■□□□□ 0.06
COL6A1-204ENST00000486023 OR6S1Q8NH40 331 aa15.42■□□□□ 0.06
COL6A1-204ENST00000486023 RP9Q8TA86 221 aaKnown RBP15.42■□□□□ 0.06
COL6A1-204ENST00000486023 CACNG6Q9BXT2 260 aa15.42■□□□□ 0.06
COL6A1-204ENST00000486023 NANSQ9NR45 359 aa15.42■□□□□ 0.06
COL6A1-204ENST00000486023 NOX1Q9Y5S8 564 aa15.42■□□□□ 0.06
COL6A1-204ENST00000486023 C2CD3Q4AC94 2353 aa15.42■□□□□ 0.06
COL6A1-204ENST00000486023 CADP27708 2225 aa15.41■□□□□ 0.06
COL6A1-204ENST00000486023 IGHV1-18A0A0C4DH31 117 aa15.41■□□□□ 0.06
COL6A1-204ENST00000486023 ELOVL7A1L3X0 281 aa15.41■□□□□ 0.06
COL6A1-204ENST00000486023 GSTA4O15217 222 aa15.41■□□□□ 0.06
COL6A1-204ENST00000486023 TMCC2O75069 709 aa15.41■□□□□ 0.06
COL6A1-204ENST00000486023 LYPD3O95274 346 aa15.41■□□□□ 0.06
COL6A1-204ENST00000486023 LY6G6DO95868 133 aa15.41■□□□□ 0.06
COL6A1-204ENST00000486023 MT-ATP6P00846 226 aa15.41■□□□□ 0.06
COL6A1-204ENST00000486023 IFNGR1P15260 489 aa15.41■□□□□ 0.06
COL6A1-204ENST00000486023 PAX1P15863 534 aa15.41■□□□□ 0.06
COL6A1-204ENST00000486023 ACVR1BP36896 505 aa15.41■□□□□ 0.06
COL6A1-204ENST00000486023 TNK1Q13470 666 aa15.41■□□□□ 0.06
COL6A1-204ENST00000486023 VHLLQ6RSH7 139 aa15.41■□□□□ 0.06
COL6A1-204ENST00000486023 MICU2Q8IYU8 434 aa15.41■□□□□ 0.06
COL6A1-204ENST00000486023 MAPK1IP1LQ8NDC0 245 aa15.41■□□□□ 0.06
COL6A1-204ENST00000486023 ADPRHL1Q8NDY3 354 aa15.41■□□□□ 0.06
COL6A1-204ENST00000486023 SLC38A2Q96QD8 506 aa15.41■□□□□ 0.06
COL6A1-204ENST00000486023 CMTM6Q9NX76 183 aa15.41■□□□□ 0.06
COL6A1-204ENST00000486023 POFUT2Q9Y2G5 429 aa15.41■□□□□ 0.06
COL6A1-204ENST00000486023 RAI1Q7Z5J4 1906 aaPredicted RBP15.41■□□□□ 0.06
COL6A1-204ENST00000486023 LOC102725191A0A1B0GVB3 256 aa15.4■□□□□ 0.06
COL6A1-204ENST00000486023 FAM220BPB1ANY3 271 aa15.4■□□□□ 0.06
COL6A1-204ENST00000486023 BLOC1S5-TXNDC5H3BN57 136 aa15.4■□□□□ 0.06
COL6A1-204ENST00000486023 SSX4O60224 188 aa15.4■□□□□ 0.06
COL6A1-204ENST00000486023 IGHV4-39P01824 125 aa15.4■□□□□ 0.06
COL6A1-204ENST00000486023 KDELR2P33947 212 aa15.4■□□□□ 0.06
COL6A1-204ENST00000486023 YAP1P46937 504 aaKnown RBP15.4■□□□□ 0.06
COL6A1-204ENST00000486023 BIDP55957 195 aa15.4■□□□□ 0.06
COL6A1-204ENST00000486023 LIPEQ05469 1076 aa15.4■□□□□ 0.06
COL6A1-204ENST00000486023 NPRL3Q12980 569 aa15.4■□□□□ 0.06
COL6A1-204ENST00000486023 PIN1Q13526 163 aaPredicted RBP15.4■□□□□ 0.06
COL6A1-204ENST00000486023 ZNF74Q16587 644 aa15.4■□□□□ 0.06
COL6A1-204ENST00000486023 SPATA21Q7Z572 469 aa15.4■□□□□ 0.06
COL6A1-204ENST00000486023 PXKQ7Z7A4 578 aa15.4■□□□□ 0.06
COL6A1-204ENST00000486023 NKAIN4Q8IVV8 208 aa15.4■□□□□ 0.06
COL6A1-204ENST00000486023 WDFY1Q8IWB7 410 aa15.4■□□□□ 0.06
COL6A1-204ENST00000486023 C20orf196Q8IYI0 205 aa15.4■□□□□ 0.06
COL6A1-204ENST00000486023 TMEM123Q8N131 208 aa15.4■□□□□ 0.06
COL6A1-204ENST00000486023 FBXO17Q96EF6 278 aa15.4■□□□□ 0.06
COL6A1-204ENST00000486023 COX4I2Q96KJ9 171 aa15.4■□□□□ 0.06
COL6A1-204ENST00000486023 ADAD1Q96M93 576 aaKnown RBP15.4■□□□□ 0.06
COL6A1-204ENST00000486023 B3GAT2Q9NPZ5 323 aa15.4■□□□□ 0.06
COL6A1-204ENST00000486023 CBLN4Q9NTU7 201 aa15.4■□□□□ 0.06
COL6A1-204ENST00000486023 RIMS3Q9UJD0 308 aa15.4■□□□□ 0.06
COL6A1-204ENST00000486023 RNF223E7ERA6 249 aa15.39■□□□□ 0.05
COL6A1-204ENST00000486023 SLC22A2O15244 555 aa15.39■□□□□ 0.05
COL6A1-204ENST00000486023 ATP8B1O43520 1251 aa15.39■□□□□ 0.05
COL6A1-204ENST00000486023 FZD7O75084 574 aa15.39■□□□□ 0.05
COL6A1-204ENST00000486023 ZNF682O95780 498 aa15.39■□□□□ 0.05
COL6A1-204ENST00000486023 CRYAAP02489 173 aa15.39■□□□□ 0.05
COL6A1-204ENST00000486023 CD79AP11912 226 aa15.39■□□□□ 0.05
COL6A1-204ENST00000486023 SH3BGRP55822 239 aaPredicted RBP15.39■□□□□ 0.05
COL6A1-204ENST00000486023 PIGFQ07326 219 aa15.39■□□□□ 0.05
COL6A1-204ENST00000486023 MELKQ14680 651 aa15.39■□□□□ 0.05
COL6A1-204ENST00000486023 SLC35D2Q76EJ3 337 aa15.39■□□□□ 0.05
COL6A1-204ENST00000486023 DTX2Q86UW9 622 aa15.39■□□□□ 0.05
COL6A1-204ENST00000486023 TREML1Q86YW5 311 aa15.39■□□□□ 0.05
COL6A1-204ENST00000486023 SLC15A3Q8IY34 581 aa15.39■□□□□ 0.05
COL6A1-204ENST00000486023 PFN4Q8NHR9 129 aa15.39■□□□□ 0.05
COL6A1-204ENST00000486023 TMEM255BQ8WV15 326 aa15.39■□□□□ 0.05
COL6A1-204ENST00000486023 MPP4Q96JB8 637 aa15.39■□□□□ 0.05
COL6A1-204ENST00000486023 PRSS27Q9BQR3 290 aa15.39■□□□□ 0.05
COL6A1-204ENST00000486023 ULBP2Q9BZM5 246 aa15.39■□□□□ 0.05
COL6A1-204ENST00000486023 NELFAQ9H3P2 528 aa15.39■□□□□ 0.05
COL6A1-204ENST00000486023 SEC61A2Q9H9S3 476 aa15.39■□□□□ 0.05
COL6A1-204ENST00000486023 EFCAB1Q9HAE3 211 aa15.39■□□□□ 0.05
COL6A1-204ENST00000486023 OBP2BQ9NPH6 170 aa15.39■□□□□ 0.05
COL6A1-204ENST00000486023 TAS2R5Q9NYW4 299 aa15.39■□□□□ 0.05
COL6A1-204ENST00000486023 RPL36A-HNRNPH2H7BZ11 118 aa15.38■□□□□ 0.05
COL6A1-204ENST00000486023 CELA3BP08861 270 aa15.38■□□□□ 0.05
COL6A1-204ENST00000486023 FUT1P19526 365 aa15.38■□□□□ 0.05
COL6A1-204ENST00000486023 APOBEC3AP31941 199 aaPredicted RBP15.38■□□□□ 0.05
COL6A1-204ENST00000486023 CSNK1A1P48729 337 aa15.38■□□□□ 0.05
COL6A1-204ENST00000486023 NUDT2P50583 147 aa15.38■□□□□ 0.05
COL6A1-204ENST00000486023 IDH3GP51553 393 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms