RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 SCGB2A2Q13296 93 aa11.23□□□□□ -0.61
HDAC6-227ENST00000485102 C5orf46Q6UWT4 87 aa11.23□□□□□ -0.61
HDAC6-227ENST00000485102 C6orf89Q6UWU4 347 aa11.23□□□□□ -0.61
HDAC6-227ENST00000485102 C12orf54Q6X4T0 127 aa11.23□□□□□ -0.61
HDAC6-227ENST00000485102 ZNF627Q7L945 461 aa11.23□□□□□ -0.61
HDAC6-227ENST00000485102 MAVSQ7Z434 540 aa11.23□□□□□ -0.61
HDAC6-227ENST00000485102 LSRQ86X29 649 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-227ENST00000485102 CLIP4Q8N3C7 705 aa11.23□□□□□ -0.61
HDAC6-227ENST00000485102 CADM2Q8N3J6 435 aa11.23□□□□□ -0.61
HDAC6-227ENST00000485102 SEMA6DQ8NFY4 1073 aa11.23□□□□□ -0.61
HDAC6-227ENST00000485102 SLC38A5Q8WUX1 472 aa11.23□□□□□ -0.61
HDAC6-227ENST00000485102 OR52B2Q96RD2 323 aa11.23□□□□□ -0.61
HDAC6-227ENST00000485102 SNX18Q96RF0 628 aa11.23□□□□□ -0.61
HDAC6-227ENST00000485102 ELAC2Q9BQ52 826 aaKnown RBP11.23□□□□□ -0.61
HDAC6-227ENST00000485102 SPATA9Q9BWV2 254 aa11.23□□□□□ -0.61
HDAC6-227ENST00000485102 MS4A5Q9H3V2 200 aa11.23□□□□□ -0.61
HDAC6-227ENST00000485102 DENND2DQ9H6A0 471 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-227ENST00000485102 ARMC7Q9H6L4 198 aa11.23□□□□□ -0.61
HDAC6-227ENST00000485102 GPR35Q9HC97 309 aa11.23□□□□□ -0.61
HDAC6-227ENST00000485102 USP22Q9UPT9 525 aa11.23□□□□□ -0.61
HDAC6-227ENST00000485102 ZNF443Q9Y2A4 671 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-227ENST00000485102 IFT52Q9Y366 437 aa11.23□□□□□ -0.61
HDAC6-227ENST00000485102 CMAHPQ9Y471 501 aa11.23□□□□□ -0.61
HDAC6-227ENST00000485102 ZNF503-AS2A6NEH8 195 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 ZNF99A8MXY4 864 aaPredicted RBP11.22□□□□□ -0.61
HDAC6-227ENST00000485102 SYNGR3O43761 229 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 VENTXO95231 258 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 NPPAP01160 153 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 GSNP06396 782 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 ADRA2AP08913 450 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 PRG2P13727 222 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 PPIBP23284 216 aaKnown RBP11.22□□□□□ -0.61
HDAC6-227ENST00000485102 GLRXP35754 106 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 TMEM33P57088 247 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 MRPS11P82912 194 aaKnown RBP11.22□□□□□ -0.61
HDAC6-227ENST00000485102 DAG1Q14118 895 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 TRIP10Q15642 601 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 COQ5Q5HYK3 327 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 NET1Q7Z628 596 aaPredicted RBP11.22□□□□□ -0.61
HDAC6-227ENST00000485102 CDK20Q8IZL9 346 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 TMEM123Q8N131 208 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.22□□□□□ -0.61
HDAC6-227ENST00000485102 ADPRHL1Q8NDY3 354 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 PIK3C3Q8NEB9 887 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 MRPL24Q96A35 216 aaKnown RBP11.22□□□□□ -0.61
HDAC6-227ENST00000485102 CMTM5Q96DZ9 223 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 ZNF837Q96EG3 531 aaPredicted RBP11.22□□□□□ -0.61
HDAC6-227ENST00000485102 ITCHQ96J02 903 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 LRR1Q96L50 414 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 ZNF75AQ96N20 296 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 EBF4Q9BQW3 602 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 PLA2G12AQ9BZM1 189 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 FAM107BQ9H098 131 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 RAD21L1Q9H4I0 556 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 NOX3Q9HBY0 568 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 CRLF2Q9HC73 371 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 DYNLRB1Q9NP97 96 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 CORO2BQ9UQ03 480 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 SPEF1Q9Y4P9 236 aa11.22□□□□□ -0.61
HDAC6-227ENST00000485102 RFXANKO14593 260 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 AKAP8O43823 692 aaKnown RBP11.21□□□□□ -0.61
HDAC6-227ENST00000485102 TFP02787 698 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 ZNF35P13682 527 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 DRD4P21917 467 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 ACHEP22303 614 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 MNAT1P51948 309 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 SEC24CP53992 1094 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 SNTB2Q13425 540 aaKnown RBP11.21□□□□□ -0.61
HDAC6-227ENST00000485102 CEACAM16Q2WEN9 425 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 ELFN2Q5R3F8 820 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 FAM69AQ5T7M9 428 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 REP15Q6BDI9 236 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 USP43Q70EL4 1123 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 PIGWQ7Z7B1 504 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 SERPINA11Q86U17 422 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 MDP1Q86V88 176 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 GLCCI1Q86VQ1 547 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 KDM8Q8N371 416 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 GPR137CQ8N3F9 429 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 LSMEM1Q8N8F7 131 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 PCYOX1LQ8NBM8 494 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 PNPT1Q8TCS8 783 aaKnown RBP11.21□□□□□ -0.61
HDAC6-227ENST00000485102 C10orf82Q8WW14 230 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 OR2M2Q96R28 347 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 CCT8L2Q96SF2 557 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 TPT1P8Q9HAU6 139 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 BCL2L10Q9HD36 194 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 SLC6A13Q9NSD5 602 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 REV1Q9UBZ9 1251 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 AP3M1Q9Y2T2 418 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 NDUFAF1Q9Y375 327 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 CAPN7Q9Y6W3 813 aa11.21□□□□□ -0.61
HDAC6-227ENST00000485102 SH3PXD2BA1X283 911 aa11.2□□□□□ -0.62
HDAC6-227ENST00000485102 M0R233 179 aa11.2□□□□□ -0.62
HDAC6-227ENST00000485102 NDUFAB1O14561 156 aa11.2□□□□□ -0.62
HDAC6-227ENST00000485102 AIM2O14862 343 aa11.2□□□□□ -0.62
HDAC6-227ENST00000485102 ANGPT2O15123 496 aa11.2□□□□□ -0.62
HDAC6-227ENST00000485102 SPRY1O43609 319 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-227ENST00000485102 TRAF3IP2O43734 574 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-227ENST00000485102 ANP32DO95626 131 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms