RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 PTDSS2Q9BVG9 487 aa10.42□□□□□ -0.74
SNRNP200-206ENST00000484372 TMEM38AQ9H6F2 299 aa10.42□□□□□ -0.74
SNRNP200-206ENST00000484372 MYOZ1Q9NP98 299 aaPredicted RBP10.42□□□□□ -0.74
SNRNP200-206ENST00000484372 B3GAT2Q9NPZ5 323 aa10.42□□□□□ -0.74
SNRNP200-206ENST00000484372 CA10Q9NS85 328 aa10.42□□□□□ -0.74
SNRNP200-206ENST00000484372 ARL8BQ9NVJ2 186 aa10.42□□□□□ -0.74
SNRNP200-206ENST00000484372 GID8Q9NWU2 228 aa10.42□□□□□ -0.74
SNRNP200-206ENST00000484372 TAGLN3Q9UI15 199 aa10.42□□□□□ -0.74
SNRNP200-206ENST00000484372 A0A096LPE4 126 aa10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 LOC102725191A0A1B0GVB3 256 aa10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 A0A1W2PPZ6 126 aa10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 B9A039 149 aa10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 M0R082 166 aa10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 NDUFS8O00217 210 aa10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 PDE5AO76074 875 aa10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 GRPRP30550 384 aa10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 ARR3P36575 388 aa10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 CAPZA2P47755 286 aa10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 ARF1P84077 181 aaKnown RBP10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 RBBP4Q09028 425 aa10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 TMEM249Q2WGJ8 235 aa10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 C8orf82Q6P1X6 216 aaPredicted RBP10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 HACD2Q6Y1H2 254 aa10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 SLC46A3Q7Z3Q1 461 aa10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 HIPK1Q86Z02 1210 aa10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 C10orf53Q8N6V4 93 aa10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 SCAIQ8N9R8 606 aa10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 C11orf65Q8NCR3 313 aa10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 ADPRHL1Q8NDY3 354 aa10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 ZNF417Q8TAU3 575 aa10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 HTRA1Q92743 480 aa10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 NSL1Q96IY1 281 aa10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 ZNF587Q96SQ5 575 aaPredicted RBP10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 VRK1Q99986 396 aaPredicted RBP10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 CRNNQ9UBG3 495 aaPredicted RBP10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 CHD3Q12873 2000 aaKnown RBP10.41□□□□□ -0.74
SNRNP200-206ENST00000484372 A0A087WUJ7 227 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 ZNF726A6NNF4 738 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 ZNF432O94892 652 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 OR6A2O95222 327 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 T-ENOLP0DO92 83 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 CBR1P16152 277 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 USF1P22415 310 aaPredicted RBP10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 HTR2AP28223 471 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 AQP1P29972 269 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 MNAT1P51948 309 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 VLDLRP98155 873 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 NAAAQ02083 359 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 LGALS3BPQ08380 585 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 PMS2P3Q13401 168 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 OR1Q1Q15612 314 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 CYP51A1Q16850 503 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 SWI5Q1ZZU3 235 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 CEACAM16Q2WEN9 425 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 SWT1Q5T5J6 900 aaKnown RBP10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 CYB5R2Q6BCY4 276 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 NANOGP8Q6NSW7 305 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 VHLLQ6RSH7 139 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 SLC30A8Q8IWU4 369 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 ZNF540Q8NDQ6 660 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 OR8J3Q8NGG0 315 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 C10orf105Q8TEF2 133 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 KCNK17Q96T54 332 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 SH3GL1Q99961 368 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 HOPXQ9BPY8 73 aaPredicted RBP10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 CPPED1Q9BRF8 314 aaPredicted RBP10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 PIMREGQ9BSJ6 248 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 RAB1BQ9H0U4 201 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 IKZF5Q9H5V7 419 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 NANOGQ9H9S0 305 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 CRLF2Q9HC73 371 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 GPR35Q9HC97 309 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 B3GAT1Q9P2W7 334 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 CDC42EP3Q9UKI2 254 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 USP22Q9UPT9 525 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 NOX1Q9Y5S8 564 aa10.4□□□□□ -0.74
SNRNP200-206ENST00000484372 A0A0B4J2E0 115 aa10.39□□□□□ -0.75
SNRNP200-206ENST00000484372 A0A1B0GX12 115 aa10.39□□□□□ -0.75
SNRNP200-206ENST00000484372 ZNF99A8MXY4 864 aaPredicted RBP10.39□□□□□ -0.75
SNRNP200-206ENST00000484372 M0R3G1 203 aa10.39□□□□□ -0.75
SNRNP200-206ENST00000484372 GPRIN2O60269 458 aa10.39□□□□□ -0.75
SNRNP200-206ENST00000484372 TPST1O60507 370 aa10.39□□□□□ -0.75
SNRNP200-206ENST00000484372 FMO6PO60774 539 aa10.39□□□□□ -0.75
SNRNP200-206ENST00000484372 FZD7O75084 574 aa10.39□□□□□ -0.75
SNRNP200-206ENST00000484372 ENTPD5O75356 428 aa10.39□□□□□ -0.75
SNRNP200-206ENST00000484372 IGKV3-15P01624 115 aa10.39□□□□□ -0.75
SNRNP200-206ENST00000484372 IGLV1-44P01699 117 aa10.39□□□□□ -0.75
SNRNP200-206ENST00000484372 OR4A8P0C604 315 aa10.39□□□□□ -0.75
SNRNP200-206ENST00000484372 CECR9P0C854 216 aa10.39□□□□□ -0.75
SNRNP200-206ENST00000484372 CALB2P22676 271 aa10.39□□□□□ -0.75
SNRNP200-206ENST00000484372 CBLP22681 906 aa10.39□□□□□ -0.75
SNRNP200-206ENST00000484372 AHCYP23526 432 aa10.39□□□□□ -0.75
SNRNP200-206ENST00000484372 GZMKP49863 264 aa10.39□□□□□ -0.75
SNRNP200-206ENST00000484372 IDH3GP51553 393 aaPredicted RBP10.39□□□□□ -0.75
SNRNP200-206ENST00000484372 TUBA1BP68363 451 aa10.39□□□□□ -0.75
SNRNP200-206ENST00000484372 TUBA4AP68366 448 aa10.39□□□□□ -0.75
SNRNP200-206ENST00000484372 LSM11P83369 360 aaKnown RBP eCLIP10.39□□□□□ -0.75
SNRNP200-206ENST00000484372 NPRL3Q12980 569 aa10.39□□□□□ -0.75
SNRNP200-206ENST00000484372 CARTPTQ16568 116 aa10.39□□□□□ -0.75
SNRNP200-206ENST00000484372 C6orf52Q5T4I8 152 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms