RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 ZNF587BE7ETH6 402 aa13.97□□□□□ -0.17
UPF3A-208ENST00000484246 hCG_2039718K7EN88 272 aa13.97□□□□□ -0.17
UPF3A-208ENST00000484246 ACOT8O14734 319 aa13.97□□□□□ -0.17
UPF3A-208ENST00000484246 GYG2O15488 501 aa13.97□□□□□ -0.17
UPF3A-208ENST00000484246 KLF4O43474 513 aa13.97□□□□□ -0.17
UPF3A-208ENST00000484246 PIP5K1CO60331 668 aa13.97□□□□□ -0.17
UPF3A-208ENST00000484246 IFI30P13284 250 aa13.97□□□□□ -0.17
UPF3A-208ENST00000484246 DNAJA1P31689 397 aaKnown RBP13.97□□□□□ -0.17
UPF3A-208ENST00000484246 SLC9A3P48764 834 aa13.97□□□□□ -0.17
UPF3A-208ENST00000484246 NR1H2P55055 460 aa13.97□□□□□ -0.17
UPF3A-208ENST00000484246 FOXG1P55316 489 aaPredicted RBP13.97□□□□□ -0.17
UPF3A-208ENST00000484246 SMIM11AP58511 58 aa13.97□□□□□ -0.17
UPF3A-208ENST00000484246 LSM11P83369 360 aaKnown RBP eCLIP13.97□□□□□ -0.17
UPF3A-208ENST00000484246 MS4A2Q01362 244 aa13.97□□□□□ -0.17
UPF3A-208ENST00000484246 RPL18Q07020 188 aaKnown RBP13.97□□□□□ -0.17
UPF3A-208ENST00000484246 TSC22D1Q15714 1073 aa13.97□□□□□ -0.17
UPF3A-208ENST00000484246 ZNF730Q6ZMV8 503 aa13.97□□□□□ -0.17
UPF3A-208ENST00000484246 TMPRSS11FQ6ZWK6 438 aa13.97□□□□□ -0.17
UPF3A-208ENST00000484246 C20orf196Q8IYI0 205 aa13.97□□□□□ -0.17
UPF3A-208ENST00000484246 OR6X1Q8NH79 312 aa13.97□□□□□ -0.17
UPF3A-208ENST00000484246 MAGEE2Q8TD90 523 aaPredicted RBP13.97□□□□□ -0.17
UPF3A-208ENST00000484246 ALKBH3Q96Q83 286 aaPredicted RBP13.97□□□□□ -0.17
UPF3A-208ENST00000484246 ZNF347Q96SE7 839 aa13.97□□□□□ -0.17
UPF3A-208ENST00000484246 SEPHS2Q99611 448 aa13.97□□□□□ -0.17
UPF3A-208ENST00000484246 BTBD10Q9BSF8 475 aa13.97□□□□□ -0.17
UPF3A-208ENST00000484246 THTPAQ9BU02 230 aa13.97□□□□□ -0.17
UPF3A-208ENST00000484246 NGBQ9NPG2 151 aa13.97□□□□□ -0.17
UPF3A-208ENST00000484246 CRYBG3Q68DQ2 2970 aa13.97□□□□□ -0.17
UPF3A-208ENST00000484246 CENPEQ02224 2701 aa13.96□□□□□ -0.17
UPF3A-208ENST00000484246 CENPBD1B2RD01 187 aa13.96□□□□□ -0.17
UPF3A-208ENST00000484246 UPK3AO75631 287 aa13.96□□□□□ -0.17
UPF3A-208ENST00000484246 RAD51DO75771 328 aa13.96□□□□□ -0.17
UPF3A-208ENST00000484246 ATP5HO75947 161 aa13.96□□□□□ -0.17
UPF3A-208ENST00000484246 FABP3P05413 133 aa13.96□□□□□ -0.17
UPF3A-208ENST00000484246 UMPSP11172 480 aa13.96□□□□□ -0.17
UPF3A-208ENST00000484246 HOXB6P17509 224 aaKnown RBP13.96□□□□□ -0.17
UPF3A-208ENST00000484246 AHCYP23526 432 aa13.96□□□□□ -0.17
UPF3A-208ENST00000484246 LIMS1P48059 325 aa13.96□□□□□ -0.17
UPF3A-208ENST00000484246 IL1RL1Q01638 556 aa13.96□□□□□ -0.17
UPF3A-208ENST00000484246 CYP2R1Q6VVX0 501 aa13.96□□□□□ -0.17
UPF3A-208ENST00000484246 LINGO2Q7L985 606 aa13.96□□□□□ -0.17
UPF3A-208ENST00000484246 HDDC2Q7Z4H3 204 aa13.96□□□□□ -0.17
UPF3A-208ENST00000484246 CDC20BQ86Y33 519 aa13.96□□□□□ -0.17
UPF3A-208ENST00000484246 CCDC124Q96CT7 223 aaKnown RBP13.96□□□□□ -0.17
UPF3A-208ENST00000484246 CLPTM1LQ96KA5 538 aa13.96□□□□□ -0.17
UPF3A-208ENST00000484246 TMEM204Q9BSN7 226 aa13.96□□□□□ -0.17
UPF3A-208ENST00000484246 POLDIP3Q9BY77 421 aaKnown RBP13.96□□□□□ -0.17
UPF3A-208ENST00000484246 TRIM15Q9C019 465 aa13.96□□□□□ -0.17
UPF3A-208ENST00000484246 OBP2BQ9NPH6 170 aa13.96□□□□□ -0.17
UPF3A-208ENST00000484246 MED29Q9NX70 200 aa13.96□□□□□ -0.17
UPF3A-208ENST00000484246 SLC25A15Q9Y619 301 aa13.96□□□□□ -0.17
UPF3A-208ENST00000484246 V9GYQ6 96 aa13.96□□□□□ -0.17
UPF3A-208ENST00000484246 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.95□□□□□ -0.18
UPF3A-208ENST00000484246 CIB4A0PJX0 185 aa13.95□□□□□ -0.18
UPF3A-208ENST00000484246 SLC35F4A4IF30 521 aa13.95□□□□□ -0.18
UPF3A-208ENST00000484246 AQP12BA6NM10 295 aa13.95□□□□□ -0.18
UPF3A-208ENST00000484246 RNF13O43567 381 aa13.95□□□□□ -0.18
UPF3A-208ENST00000484246 DNAJC8O75937 253 aaPredicted RBP13.95□□□□□ -0.18
UPF3A-208ENST00000484246 IGHMP01871 453 aa13.95□□□□□ -0.18
UPF3A-208ENST00000484246 IFNGR1P15260 489 aa13.95□□□□□ -0.18
UPF3A-208ENST00000484246 MAKP20794 623 aa13.95□□□□□ -0.18
UPF3A-208ENST00000484246 PAX7P23759 505 aa13.95□□□□□ -0.18
UPF3A-208ENST00000484246 RASSF2P50749 326 aa13.95□□□□□ -0.18
UPF3A-208ENST00000484246 ROR2Q01974 943 aaKnown RBP13.95□□□□□ -0.18
UPF3A-208ENST00000484246 LGALS3BPQ08380 585 aa13.95□□□□□ -0.18
UPF3A-208ENST00000484246 FHL1Q13642 323 aa13.95□□□□□ -0.18
UPF3A-208ENST00000484246 PPA1Q15181 289 aa13.95□□□□□ -0.18
UPF3A-208ENST00000484246 TAF11Q15544 211 aa13.95□□□□□ -0.18
UPF3A-208ENST00000484246 PODNL1Q6PEZ8 512 aa13.95□□□□□ -0.18
UPF3A-208ENST00000484246 SLC35D2Q76EJ3 337 aa13.95□□□□□ -0.18
UPF3A-208ENST00000484246 ZNF627Q7L945 461 aa13.95□□□□□ -0.18
UPF3A-208ENST00000484246 ZDHHC21Q8IVQ6 265 aa13.95□□□□□ -0.18
UPF3A-208ENST00000484246 AQP12AQ8IXF9 295 aa13.95□□□□□ -0.18
UPF3A-208ENST00000484246 GPR137CQ8N3F9 429 aa13.95□□□□□ -0.18
UPF3A-208ENST00000484246 MUCL1Q96DR8 90 aa13.95□□□□□ -0.18
UPF3A-208ENST00000484246 ZC3HAV1LQ96H79 300 aaKnown RBP13.95□□□□□ -0.18
UPF3A-208ENST00000484246 TXNDC15Q96J42 360 aa13.95□□□□□ -0.18
UPF3A-208ENST00000484246 PLEKHF2Q9H8W4 249 aa13.95□□□□□ -0.18
UPF3A-208ENST00000484246 SLC17A5Q9NRA2 495 aa13.95□□□□□ -0.18
UPF3A-208ENST00000484246 STX18Q9P2W9 335 aaKnown RBP13.95□□□□□ -0.18
UPF3A-208ENST00000484246 AMDHD2Q9Y303 409 aa13.95□□□□□ -0.18
UPF3A-208ENST00000484246 MAGED1Q9Y5V3 778 aaPredicted RBP13.95□□□□□ -0.18
UPF3A-208ENST00000484246 TEP1Q99973 2627 aaKnown RBP13.94□□□□□ -0.18
UPF3A-208ENST00000484246 ABCA12Q86UK0 2595 aa13.94□□□□□ -0.18
UPF3A-208ENST00000484246 APCP25054 2843 aa13.94□□□□□ -0.18
UPF3A-208ENST00000484246 TRBV4-1A0A0J9YWV2 114 aa13.94□□□□□ -0.18
UPF3A-208ENST00000484246 A0A1W2PPR1 153 aa13.94□□□□□ -0.18
UPF3A-208ENST00000484246 SH3PXD2BA1X283 911 aa13.94□□□□□ -0.18
UPF3A-208ENST00000484246 ZNF726A6NNF4 738 aa13.94□□□□□ -0.18
UPF3A-208ENST00000484246 EFCAB9A8MZ26 197 aa13.94□□□□□ -0.18
UPF3A-208ENST00000484246 C11orf98E9PRG8 122 aa13.94□□□□□ -0.18
UPF3A-208ENST00000484246 CLOCKO15516 846 aa13.94□□□□□ -0.18
UPF3A-208ENST00000484246 KRT33AO76009 404 aa13.94□□□□□ -0.18
UPF3A-208ENST00000484246 DIRAS1O95057 198 aa13.94□□□□□ -0.18
UPF3A-208ENST00000484246 AQP2P41181 271 aa13.94□□□□□ -0.18
UPF3A-208ENST00000484246 OMPP47874 163 aa13.94□□□□□ -0.18
UPF3A-208ENST00000484246 DAP3P51398 398 aaKnown RBP13.94□□□□□ -0.18
UPF3A-208ENST00000484246 HMGA2P52926 109 aa13.94□□□□□ -0.18
UPF3A-208ENST00000484246 SEC23BQ15437 767 aa13.94□□□□□ -0.18
UPF3A-208ENST00000484246 FGD3Q5JSP0 725 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms