RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 RAB35Q15286 201 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 VMACQ2NL98 169 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 MMEL1Q495T6 779 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 ZNF613Q6PF04 617 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 CLEC2AQ6UVW9 174 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 DNM1P46Q6ZS02 220 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 PATL1Q86TB9 770 aaKnown RBP9.11□□□□□ -0.95
CPSF4-212ENST00000482251 MDP1Q86V88 176 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 SNX32Q86XE0 403 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 ANKS4BQ8N8V4 417 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 ADPRHL1Q8NDY3 354 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 PIK3C3Q8NEB9 887 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 ADAMTS16Q8TE57 1224 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 SLC41A3Q96GZ6 507 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 KATNB1Q9BVA0 655 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 GRIP2Q9C0E4 1043 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 NOX3Q9HBY0 568 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 OBP2BQ9NPH6 170 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 CA10Q9NS85 328 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 ZNF446Q9NWS9 450 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 CORINQ9Y5Q5 1042 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 ALPK2Q86TB3 2170 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 SLC35F4A4IF30 521 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 KIAA1324LA8MWY0 1029 aaPredicted RBP9.1□□□□□ -0.95
CPSF4-212ENST00000482251 ZNF99A8MXY4 864 aaPredicted RBP9.1□□□□□ -0.95
CPSF4-212ENST00000482251 H7C417 338 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 PLPP3O14495 311 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 LYPD3O95274 346 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 HLA-HP01893 362 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 UMPSP11172 480 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 CD79AP11912 226 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 IFNGR1P15260 489 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 APOBEC3AP31941 199 aaPredicted RBP9.1□□□□□ -0.95
CPSF4-212ENST00000482251 GZMMP51124 257 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 BIDP55957 195 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 SNRPD2P62316 118 aaKnown RBP9.1□□□□□ -0.95
CPSF4-212ENST00000482251 GUCY1A3Q02108 690 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 CHRNB3Q05901 458 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 KLF10Q13118 480 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 MFSD13AQ14CX5 517 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 CARTPTQ16568 116 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 LRRC23Q53EV4 343 aaPredicted RBP9.1□□□□□ -0.95
CPSF4-212ENST00000482251 SWT1Q5T5J6 900 aaKnown RBP9.1□□□□□ -0.95
CPSF4-212ENST00000482251 INTS11Q5TA45 600 aaKnown RBP9.1□□□□□ -0.95
CPSF4-212ENST00000482251 NANOGP8Q6NSW7 305 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 DEF8Q6ZN54 512 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 SLC46A3Q7Z3Q1 461 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 SLC30A8Q8IWU4 369 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 C20orf196Q8IYI0 205 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 LRRC17Q8N6Y2 441 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 SCAIQ8N9R8 606 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 OR6N1Q8NGY5 312 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 OR5J2Q8NH18 312 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 TSPEARQ8WU66 669 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 LRRC58Q96CX6 371 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 SORCS2Q96PQ0 1159 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 RHNO1Q9BSD3 238 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 TMEM43Q9BTV4 400 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 ULBP2Q9BZM5 246 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 NANOGQ9H9S0 305 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 MRPL39Q9NYK5 338 aaKnown RBP9.1□□□□□ -0.95
CPSF4-212ENST00000482251 ARMCX1Q9P291 453 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 ADAM21Q9UKJ8 722 aa9.1□□□□□ -0.95
CPSF4-212ENST00000482251 ANK3Q12955 4377 aaKnown RBP9.1□□□□□ -0.95
CPSF4-212ENST00000482251 LOC100653049A0A140TA62 436 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 TRAPPC13A5PLN9 417 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 ZNF726A6NNF4 738 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 RPL36A-HNRNPH2H7BZ11 118 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 FMO6PO60774 539 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 KRT34O76011 436 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 OR6A2O95222 327 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 MT-ATP6P00846 226 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 IGKV3-15P01624 115 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 IGLV1-44P01699 117 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 C8BP07358 591 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 OR4A8P0C604 315 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 SERPINF1P36955 418 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 CSNK1A1P48729 337 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 PIGFQ07326 219 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 CYLC2Q14093 348 aaPredicted RBP9.09□□□□□ -0.95
CPSF4-212ENST00000482251 ADIPOQQ15848 244 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 ZNF74Q16587 644 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 MST1LQ2TV78 715 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 METTL21CQ5VZV1 264 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 KRT80Q6KB66 452 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 TTC33Q6PID6 262 aaPredicted RBP9.09□□□□□ -0.95
CPSF4-212ENST00000482251 ZNF813Q6ZN06 617 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 CARM1Q86X55 608 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 POU5F2Q8N7G0 328 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 OR6S1Q8NH40 331 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 PFN4Q8NHR9 129 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 MAGEE2Q8TD90 523 aaPredicted RBP9.09□□□□□ -0.95
CPSF4-212ENST00000482251 NANOS1Q8WY41 292 aaKnown RBP9.09□□□□□ -0.95
CPSF4-212ENST00000482251 FAM168AQ92567 244 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 PROX1Q92786 737 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 MS4A3Q96HJ5 214 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 BOD1Q96IK1 185 aa9.09□□□□□ -0.95
CPSF4-212ENST00000482251 ZNF317Q96PQ6 595 aaPredicted RBP9.09□□□□□ -0.95
CPSF4-212ENST00000482251 VRK1Q99986 396 aaPredicted RBP9.09□□□□□ -0.95
CPSF4-212ENST00000482251 ECSITQ9BQ95 431 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms