RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 OR6C70A6NIJ9 312 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 HK1P19367 917 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 RBMS1P29558 406 aaKnown RBP13.1□□□□□ -0.31
CHD3-211ENST00000481999 SLC6A6P31641 620 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 POU4F2Q12837 409 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 ZNF74Q16587 644 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 SLC23A3Q6PIS1 610 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 PAMR1Q6UXH9 720 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 OVCH1Q7RTY7 1134 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 CEACAM19Q7Z692 300 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 YIPF7Q8N8F6 280 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 ABHD4Q8TB40 342 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 CREB3L1Q96BA8 519 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 WACQ9BTA9 647 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 MMP25Q9NPA2 562 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 NANSQ9NR45 359 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 ALG1L2C9J202 215 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 OR7A10O76100 309 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 CER1O95813 267 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 IFNGP01579 166 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 TFP02787 698 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 ADH7P40394 386 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 SLC3A1Q07837 685 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 SFXN4Q6P4A7 337 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 ARHGAP11AQ6P4F7 1023 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 VASH1Q7L8A9 365 aaPredicted RBP13.1□□□□□ -0.31
CHD3-211ENST00000481999 SAMD12Q8N8I0 201 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 BMPERQ8N8U9 685 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 SMPDL3BQ92485 455 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 C4orf36Q96KX1 117 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 LPAR4Q99677 370 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 PPIL3Q9H2H8 161 aaKnown RBP13.1□□□□□ -0.31
CHD3-211ENST00000481999 PLSCR3Q9NRY6 295 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 ING3Q9NXR8 418 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 ZMIZ1Q9ULJ6 1067 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 RASD1Q9Y272 281 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 NPFFR2Q9Y5X5 522 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 RALGAPA1Q6GYQ0 2036 aa13.1□□□□□ -0.31
CHD3-211ENST00000481999 J3QLW9 94 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 DCTN6O00399 190 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 PLGP00747 810 aaPredicted RBP13.09□□□□□ -0.31
CHD3-211ENST00000481999 ZNF19P17023 458 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 NPR2P20594 1047 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 THBS2P35442 1172 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 OR12D2P58182 307 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 E2F1Q01094 437 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 YIF1BQ5BJH7 314 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 YOD1Q5VVQ6 348 aaPredicted RBP13.09□□□□□ -0.31
CHD3-211ENST00000481999 PXKQ7Z7A4 578 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 OR4M1Q8NGD0 313 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 METTL21AQ8WXB1 218 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 RFT1Q96AA3 541 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 SLC25A36Q96CQ1 311 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 TRAF4Q9BUZ4 470 aaPredicted RBP13.09□□□□□ -0.31
CHD3-211ENST00000481999 NIPAL2Q9H841 368 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 R4GN57 208 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 CPAMD8Q8IZJ3 1885 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 LNP1A1A4G5 178 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 A6NL46 340 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 C11orf98E9PRG8 122 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 INMT-MINDY4F8WBC2 141 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 FADS1O60427 444 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 GPANK1O95872 356 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 ARSBP15848 533 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 IL11P20809 199 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 MPLP40238 635 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 RPS27P42677 84 aaKnown RBP13.09□□□□□ -0.31
CHD3-211ENST00000481999 CDKN2AP42771 156 aaKnown RBP13.09□□□□□ -0.31
CHD3-211ENST00000481999 PITPNBP48739 271 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 RPS4XP62701 263 aaKnown RBP13.09□□□□□ -0.31
CHD3-211ENST00000481999 FOXK1P85037 733 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 ZNF85Q03923 595 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 FAM27D1Q5T7N8 215 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 KDM8Q8N371 416 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 MS4A15Q8N5U1 240 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 TEX19Q8NA77 164 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 C17orf47Q8NEP4 570 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 OR6K6Q8NGW6 343 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 GRPEL2Q8TAA5 225 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 FOXN4Q96NZ1 517 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 THAP7Q9BT49 309 aaPredicted RBP13.09□□□□□ -0.31
CHD3-211ENST00000481999 VDAC3Q9Y277 283 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 EXPH5Q8NEV8 1989 aa13.09□□□□□ -0.31
CHD3-211ENST00000481999 A0A087WV48 116 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 VSTM2BA6NLU5 285 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 NTN3O00634 580 aaPredicted RBP13.08□□□□□ -0.32
CHD3-211ENST00000481999 TO15178 435 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 SELENOFO60613 162 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 SC5DO75845 299 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 OR2J2O76002 312 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 EIF4EP06730 217 aaKnown RBP13.08□□□□□ -0.32
CHD3-211ENST00000481999 SP9P0CG40 484 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 SLC6A1P30531 599 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 PYCR1P32322 319 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 NRG3P56975 720 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 RRAS2P62070 204 aaPredicted RBP13.08□□□□□ -0.32
CHD3-211ENST00000481999 COL28A1Q2UY09 1125 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 DMKNQ6E0U4 476 aaPredicted RBP13.08□□□□□ -0.32
CHD3-211ENST00000481999 NPEPL1Q8NDH3 523 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 ZFAND1Q8TCF1 268 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms