RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 SCML2Q9UQR0 700 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 RNF6Q9Y252 685 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 U3KQA8 63 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 AKAP13Q12802 2813 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 ATRXP46100 2492 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 RIF1Q5UIP0 2472 aaKnown RBP2.81□□□□□ -1.96
SMC6-208ENST00000481708 ZFC3H1O60293 1989 aaKnown RBP2.81□□□□□ -1.96
SMC6-208ENST00000481708 NPIPA5A0A0B4J1W7 369 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 LOC101059948A0A1B0GTJ6 334 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 NPIPA5E9PKD4 350 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 PRRG2O14669 202 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 CASKO14936 926 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 ANXA9O76027 345 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 NDUFB8O95169 186 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 PEX11BO96011 259 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 HOXD4P09016 255 aaPredicted RBP2.81□□□□□ -1.96
SMC6-208ENST00000481708 GABRR2P28476 465 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 OR3A3P47888 321 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 NPBWR2P48146 333 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 CLDN18P56856 261 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 PROK1P58294 105 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 ZNF33BQ06732 778 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 MFAP5Q13361 173 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 DUSP5Q16690 384 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 TECRLQ5HYJ1 363 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 THEM4Q5T1C6 240 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 N4BP2L1Q5TBK1 243 aaPredicted RBP2.81□□□□□ -1.96
SMC6-208ENST00000481708 WDR25Q64LD2 544 aaPredicted RBP2.81□□□□□ -1.96
SMC6-208ENST00000481708 PTRHD1Q6GMV3 140 aaKnown RBP2.81□□□□□ -1.96
SMC6-208ENST00000481708 USP43Q70EL4 1123 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 HSD11B1LQ7Z5J1 315 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 ZNF589Q86UQ0 364 aaPredicted RBP2.81□□□□□ -1.96
SMC6-208ENST00000481708 MFSD6LQ8IWD5 586 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 ZNF491Q8N8L2 437 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 CDRT4Q8N9R6 151 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 OR1J1Q8NGS3 322 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 OR4Q3Q8NH05 313 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.81□□□□□ -1.96
SMC6-208ENST00000481708 CREB3L1Q96BA8 519 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 OXGR1Q96P68 337 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 SLC29A1Q99808 456 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 CNPY3Q9BT09 278 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 C9orf16Q9BUW7 83 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 MRM3Q9HC36 420 aaKnown RBP2.81□□□□□ -1.96
SMC6-208ENST00000481708 FGF20Q9NP95 211 aaPredicted RBP2.81□□□□□ -1.96
SMC6-208ENST00000481708 OR2S2Q9NQN1 319 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 NPIPA1Q9UND3 350 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 MRPS18BQ9Y676 258 aaKnown RBP2.81□□□□□ -1.96
SMC6-208ENST00000481708 CUBNO60494 3623 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 RALGAPA1Q6GYQ0 2036 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 TMEM272A0A1B0GTI8 110 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 BCLAF3A2AJT9 711 aaKnown RBP2.81□□□□□ -1.96
SMC6-208ENST00000481708 XPNPEP2O43895 674 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 IFNW1P05000 195 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 CMA1P23946 247 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 MAGEA6P43360 314 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 FHITP49789 147 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 PSMC5P62195 406 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 RPL24P83731 157 aaKnown RBP2.81□□□□□ -1.96
SMC6-208ENST00000481708 SMARCB1Q12824 385 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 ZNF155Q12901 538 aaPredicted RBP2.81□□□□□ -1.96
SMC6-208ENST00000481708 FAM189A2Q15884 450 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 EXOC3L4Q17RC7 722 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 GPR107Q5VW38 600 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 CLIP4Q8N3C7 705 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 TRAM1L1Q8N609 369 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 PIH1D2Q8WWB5 315 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 FOXN4Q96NZ1 517 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 URM1Q9BTM9 101 aaKnown RBP2.81□□□□□ -1.96
SMC6-208ENST00000481708 BEX2Q9BXY8 128 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 PLA2G2FQ9BZM2 168 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 TFECO14948 347 aaPredicted RBP2.8□□□□□ -1.96
SMC6-208ENST00000481708 RAB29O14966 203 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 NGFRP08138 427 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 SLC35G4P0C7Q5 338 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 GNA11P29992 359 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 PTH2RP49190 550 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 IST1P53990 364 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 DSTNP60981 165 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 KLC1Q07866 573 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 ZNF169Q14929 603 aaPredicted RBP2.8□□□□□ -1.96
SMC6-208ENST00000481708 FAM171BQ6P995 826 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 SLC25A48Q6ZT89 311 aaKnown RBP2.8□□□□□ -1.96
SMC6-208ENST00000481708 SLC47A2Q86VL8 602 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 C17orf82Q86X59 251 aaPredicted RBP2.8□□□□□ -1.96
SMC6-208ENST00000481708 OR7A2PQ8NGA2 310 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 C17orf77Q96MU5 243 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 ZNF670Q9BS34 389 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 KRTAP17-1Q9BYP8 105 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 ZNF334Q9HCZ1 680 aaPredicted RBP2.8□□□□□ -1.96
SMC6-208ENST00000481708 ADAP2Q9NPF8 381 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 ASB6Q9NWX5 421 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 NAGKQ9UJ70 344 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 ICAM5Q9UMF0 924 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 HCFC1P51610 2035 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 NSG1A0A0A6YYJ2 146 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 A0A0D9SFI3 127 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 A0A1B0GVT2 93 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 LILRA5A6NI73 299 aa2.8□□□□□ -1.96
SMC6-208ENST00000481708 ANP32DO95626 131 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms