RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 ENTPD6O75354 484 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 SMNDC1O75940 238 aaKnown RBP eCLIP15.69■□□□□ 0.11e-7■■■□□ 15.1
UPF3A-206ENST00000480362 SYNGR4O95473 234 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 BCL10O95999 233 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 ZNF3P17036 446 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 ZNF43P17038 809 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 ACVR2AP27037 513 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 CDKN2AP42771 156 aaKnown RBP15.69■□□□□ 0.1
UPF3A-206ENST00000480362 CRMP1Q14194 572 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 MELKQ14680 651 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 RBM48Q5RL73 367 aaKnown RBP15.69■□□□□ 0.1
UPF3A-206ENST00000480362 TMEM201Q5SNT2 666 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 ARMC4Q5T2S8 1044 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 MEDAGQ5VYS4 303 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 PLBD1Q6P4A8 553 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 CXXC5Q7LFL8 322 aaKnown RBP15.69■□□□□ 0.1
UPF3A-206ENST00000480362 JAZF1Q86VZ6 243 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 ARIH2OSQ8N7S6 290 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 CYB561A3Q8NBI2 242 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 SDR9C7Q8NEX9 313 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 ZNF519Q8TB69 540 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 OTULINQ96BN8 352 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 GPR137Q96N19 417 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 ZNF582Q96NG8 517 aaPredicted RBP15.69■□□□□ 0.1
UPF3A-206ENST00000480362 NMNAT3Q96T66 252 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 YTHDF1Q9BYJ9 559 aaKnown RBP15.69■□□□□ 0.1
UPF3A-206ENST00000480362 SLC25A18Q9H1K4 315 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 MED20Q9H944 212 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 HINT3Q9NQE9 182 aaKnown RBP15.69■□□□□ 0.1
UPF3A-206ENST00000480362 MED29Q9NX70 200 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 MYRFQ9Y2G1 1151 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 NPIPB13A6NJU9 1138 aa15.68■□□□□ 0.1
UPF3A-206ENST00000480362 NPIPB4C9JG80 1138 aa15.68■□□□□ 0.1
UPF3A-206ENST00000480362 PRR23D1E9PI22 279 aaPredicted RBP15.68■□□□□ 0.1
UPF3A-206ENST00000480362 ARHGEF9O43307 516 aa15.68■□□□□ 0.1
UPF3A-206ENST00000480362 XPNPEP2O43895 674 aa15.68■□□□□ 0.1
UPF3A-206ENST00000480362 PRR23D2P0DMB1 279 aaPredicted RBP15.68■□□□□ 0.1
UPF3A-206ENST00000480362 DAP3P51398 398 aaKnown RBP15.68■□□□□ 0.1
UPF3A-206ENST00000480362 CXCR4P61073 352 aa15.68■□□□□ 0.1
UPF3A-206ENST00000480362 KRR1Q13601 381 aaKnown RBP15.68■□□□□ 0.1
UPF3A-206ENST00000480362 KRTCAP3Q53RY4 240 aa15.68■□□□□ 0.1
UPF3A-206ENST00000480362 MESTQ5EB52 335 aa15.68■□□□□ 0.1
UPF3A-206ENST00000480362 AADACL4Q5VUY2 407 aa15.68■□□□□ 0.1
UPF3A-206ENST00000480362 ZNF324BQ6AW86 544 aaPredicted RBP15.68■□□□□ 0.1
UPF3A-206ENST00000480362 LEG1Q6P5S2 330 aa15.68■□□□□ 0.1
UPF3A-206ENST00000480362 FCRLAQ7L513 359 aa15.68■□□□□ 0.1
UPF3A-206ENST00000480362 GHDCQ8N2G8 530 aa15.68■□□□□ 0.1
UPF3A-206ENST00000480362 NPEPL1Q8NDH3 523 aa15.68■□□□□ 0.1
UPF3A-206ENST00000480362 ASB10Q8WXI3 467 aa15.68■□□□□ 0.1
UPF3A-206ENST00000480362 PTP4A1Q93096 173 aa15.68■□□□□ 0.1
UPF3A-206ENST00000480362 DDOQ99489 341 aa15.68■□□□□ 0.1
UPF3A-206ENST00000480362 TUBA1CQ9BQE3 449 aa15.68■□□□□ 0.1
UPF3A-206ENST00000480362 SF3B5Q9BWJ5 86 aaKnown RBP15.68■□□□□ 0.1
UPF3A-206ENST00000480362 PRDM14Q9GZV8 571 aa15.68■□□□□ 0.1
UPF3A-206ENST00000480362 H2AFY2Q9P0M6 372 aaPredicted RBP15.68■□□□□ 0.1
UPF3A-206ENST00000480362 ZNF407Q9C0G0 2248 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 SH3D21A4FU49 640 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 KDM4EB2RXH2 506 aaPredicted RBP15.67■□□□□ 0.1
UPF3A-206ENST00000480362 SLC1A7O00341 560 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 XKRYO14609 159 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 TRAF3IP2O43734 574 aaPredicted RBP15.67■□□□□ 0.1
UPF3A-206ENST00000480362 CYTIPO60759 359 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 FAM20BO75063 409 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 TNFAIP8O95379 198 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 LYNP07948 512 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 CCDC159P0C7I6 412 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 SFTPCP11686 197 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 PAICSP22234 425 aaKnown RBP15.67■□□□□ 0.1
UPF3A-206ENST00000480362 CRHBPP24387 322 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 NUDT6P53370 316 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 BIDP55957 195 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 CSNK2BP67870 215 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 KLRB1Q12918 225 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 SLC17A1Q14916 467 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 PON3Q15166 354 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 POU4F3Q15319 338 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 ABLIM2Q6H8Q1 611 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 PLXDC2Q6UX71 529 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 CREB3L2Q70SY1 520 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 PM20D2Q8IYS1 436 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 BBS1Q8NFJ9 593 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 OR9K2Q8NGE7 335 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 ZPLD1Q8TCW7 415 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 FAR1Q8WVX9 515 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 EMC6Q9BV81 110 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 HCAR1Q9BXC0 346 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 PRRG4Q9BZD6 226 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 AMBNQ9NP70 447 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 PLCXD1Q9NUJ7 323 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 SCN3BQ9NY72 215 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 MCTS1Q9ULC4 181 aaKnown RBP15.67■□□□□ 0.1
UPF3A-206ENST00000480362 KIAA1549Q9HCM3 1950 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 LOC400499M0QZD8 3231 aa15.67■□□□□ 0.1
UPF3A-206ENST00000480362 OR14I1A6ND48 311 aa15.66■□□□□ 0.1
UPF3A-206ENST00000480362 OR6C68A6NDL8 312 aa15.66■□□□□ 0.1
UPF3A-206ENST00000480362 A6NIZ1 184 aa15.66■□□□□ 0.1
UPF3A-206ENST00000480362 ZNF716A6NP11 495 aa15.66■□□□□ 0.1
UPF3A-206ENST00000480362 H7C1C5 153 aa15.66■□□□□ 0.1
UPF3A-206ENST00000480362 RENP00797 406 aa15.66■□□□□ 0.1
UPF3A-206ENST00000480362 CLDN17P56750 224 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms