RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 LGSNQ5TDP6 509 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 OLFML2AQ68BL7 652 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 TMEM215Q68D42 235 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 TPGS1Q6ZTW0 290 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 TGIF2LYQ8IUE0 185 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 GCNT2Q8N0V5 402 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 RFESDQ8TAC1 157 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 ANKRD49Q8WVL7 239 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 ZNF75CPQ92670 426 aaPredicted RBP3.8□□□□□ -1.8
RFC4-212ENST00000479307 ADIPOR1Q96A54 375 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 ANKRD9Q96BM1 317 aaPredicted RBP3.8□□□□□ -1.8
RFC4-212ENST00000479307 LRRC45Q96CN5 670 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 C16orf45Q96MC5 204 aaPredicted RBP3.8□□□□□ -1.8
RFC4-212ENST00000479307 VSTM2LQ96N03 204 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 CAPS2Q9BXY5 557 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 PRSS16Q9NQE7 514 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 FBXL12Q9NXK8 326 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 TRAF3IP3Q9Y228 551 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 RNF6Q9Y252 685 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 PRRC2AP48634 2157 aaKnown RBP3.8□□□□□ -1.8
RFC4-212ENST00000479307 A0A0U1RQV5 110 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 ZSCAN5CA6NGD5 496 aaPredicted RBP3.79□□□□□ -1.8
RFC4-212ENST00000479307 FAM189A1O60320 539 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 RHBDL1O75783 438 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 NEBLO76041 1014 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 TPM1P09493 284 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 CLTAP09496 248 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 CT45A10P0DMU9 189 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 H2AFXP16104 143 aaPredicted RBP3.79□□□□□ -1.8
RFC4-212ENST00000479307 TSPAN8P19075 237 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 CHMLP26374 656 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 S100A5P33763 92 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 ADRA1AP35348 466 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 UGT1A3P35503 534 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 POU3F4P49335 361 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 TAF6P49848 677 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 DSCR10P59022 87 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 CBX1P83916 185 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 MRPL28Q13084 256 aaKnown RBP3.79□□□□□ -1.8
RFC4-212ENST00000479307 ART3Q13508 389 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 SYCP1Q15431 976 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 DEFB109BQ30KR1 87 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 NADK2Q4G0N4 442 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 ZNF311Q5JNZ3 666 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 PNCKQ6P2M8 343 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 NIPAL3Q6P499 406 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 AFTPHQ6ULP2 937 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 BTNL3Q6UXE8 466 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 BAIAP2L2Q6UXY1 529 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 CBWD2Q8IUF1 395 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 OR5AU1Q8NGC0 362 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 ZNF671Q8TAW3 534 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 ACMSDQ8TDX5 336 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 ART4Q93070 314 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 FAM131CQ96AQ9 280 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 TADA1Q96BN2 335 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 IFT74Q96LB3 600 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 VPS35Q96QK1 796 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 FEM1AQ9BSK4 669 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 TBCDQ9BTW9 1192 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 TBC1D10AQ9BXI6 508 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 NEUROG2Q9H2A3 272 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 DPH5Q9H2P9 285 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 VCX3BQ9H321 246 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 EXOSC3Q9NQT5 275 aaKnown RBP3.79□□□□□ -1.8
RFC4-212ENST00000479307 C1orf123Q9NWV4 160 aa3.79□□□□□ -1.8
RFC4-212ENST00000479307 MYH11P35749 1972 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 LRRC30A6NM36 301 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 PRAMEF26H0Y7S4 382 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 FGFR1OPO95684 399 aaKnown RBP3.78□□□□□ -1.8
RFC4-212ENST00000479307 AK1P00568 194 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 ZDHHC11BP0C7U3 371 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 GSTT2P0CG29 244 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 GSTT2BP0CG30 244 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 BCKDHAP12694 445 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 GCFC2P16383 781 aaKnown RBP3.78□□□□□ -1.8
RFC4-212ENST00000479307 SDC1P18827 310 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 KLK2P20151 261 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 PAICSP22234 425 aaKnown RBP3.78□□□□□ -1.8
RFC4-212ENST00000479307 ANXA13P27216 316 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 MDH1P40925 334 aaKnown RBP3.78□□□□□ -1.8
RFC4-212ENST00000479307 FNTAP49354 379 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 MNAT1P51948 309 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 RFTN1Q14699 578 aaPredicted RBP3.78□□□□□ -1.8
RFC4-212ENST00000479307 SLC10A1Q14973 349 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 RCN1Q15293 331 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 CST6Q15828 149 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 Q1RN00 199 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 TMEM41BQ5BJD5 291 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 SLC25A30Q5SVS4 291 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 DCST2Q5T1A1 773 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 MEDAGQ5VYS4 303 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 SLC39A4Q6P5W5 647 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 GCNT7Q6ZNI0 430 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 RUFY3Q7L099 469 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 TMEM110Q86TL2 294 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 TRIM69Q86WT6 500 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 TMEM86AQ8N2M4 240 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 STARD8Q92502 1023 aa3.78□□□□□ -1.8
RFC4-212ENST00000479307 KIFAP3Q92845 792 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms