RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 HYAL4Q2M3T9 481 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 ZNF792Q3KQV3 632 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 ZNF311Q5JNZ3 666 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 ADGRF1Q5T601 910 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 DNM1P46Q6ZS02 220 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 VRK2Q86Y07 508 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 LILRA3Q8N6C8 439 aaPredicted RBP19.44■□□□□ 0.7
SDF4-206ENST00000478938 GPBAR1Q8TDU6 330 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 CCDC107Q8WV48 283 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 OTUB2Q96DC9 234 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 PPP1R16AQ96I34 528 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 MICU1Q9BPX6 476 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 ZDHHC8Q9ULC8 765 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 GXYLT2A0PJZ3 443 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 F8VVB4 439 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 F8VWA3 439 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 PPM1DO15297 605 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 MOSPD3O75425 235 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 ITGB2P05107 769 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 PRKXP51817 358 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 DHRS2Q13268 280 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 PLEKHS1Q5SXH7 462 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 PRAMEF17Q5VTA0 474 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 CAMK1GQ96NX5 476 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 MRPL37Q9BZE1 423 aaKnown RBP19.44■□□□□ 0.7
SDF4-206ENST00000478938 DPH1Q9BZG8 443 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 TIMM10BQ9Y5J6 103 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 CRYBB1P53674 252 aaPredicted RBP19.43■□□□□ 0.7
SDF4-206ENST00000478938 RAB4BP61018 213 aa19.43■□□□□ 0.7
SDF4-206ENST00000478938 ZNF511Q8NB15 262 aa19.43■□□□□ 0.7
SDF4-206ENST00000478938 SECTM1Q8WVN6 248 aa19.43■□□□□ 0.7
SDF4-206ENST00000478938 NEUROD4Q9HD90 331 aa19.43■□□□□ 0.7
SDF4-206ENST00000478938 STEAP1Q9UHE8 339 aa19.43■□□□□ 0.7
SDF4-206ENST00000478938 CD84Q9UIB8 345 aa19.43■□□□□ 0.7
SDF4-206ENST00000478938 FRMPD3Q5JV73 1810 aa19.43■□□□□ 0.7
SDF4-206ENST00000478938 A0A087WV48 116 aa19.43■□□□□ 0.7
SDF4-206ENST00000478938 FOXE1O00358 373 aaPredicted RBP19.43■□□□□ 0.7
SDF4-206ENST00000478938 SNRPCP09234 159 aaKnown RBP19.43■□□□□ 0.7
SDF4-206ENST00000478938 NDUFA6P56556 154 aa19.43■□□□□ 0.7
SDF4-206ENST00000478938 PKIAP61925 76 aa19.43■□□□□ 0.7
SDF4-206ENST00000478938 SIRPAP78324 504 aa19.43■□□□□ 0.7
SDF4-206ENST00000478938 NR0B2Q15466 257 aa19.43■□□□□ 0.7
SDF4-206ENST00000478938 LCTLQ6UWM7 567 aa19.43■□□□□ 0.7
SDF4-206ENST00000478938 PARPBPQ9NWS1 579 aa19.43■□□□□ 0.7
SDF4-206ENST00000478938 CBY1Q9Y3M2 126 aa19.43■□□□□ 0.7
SDF4-206ENST00000478938 HCKP08631 526 aa19.42■□□□□ 0.7
SDF4-206ENST00000478938 EPHB3P54753 998 aa19.42■□□□□ 0.7
SDF4-206ENST00000478938 ZNF280BQ86YH2 543 aa19.42■□□□□ 0.7
SDF4-206ENST00000478938 OR56A3Q8NH54 315 aa19.42■□□□□ 0.7
SDF4-206ENST00000478938 GNG8Q9UK08 70 aa19.42■□□□□ 0.7
SDF4-206ENST00000478938 NUMA1Q14980 2115 aa19.42■□□□□ 0.7
SDF4-206ENST00000478938 OR2AG2A6NM03 316 aa19.42■□□□□ 0.7
SDF4-206ENST00000478938 FAM157AC9JC47 383 aa19.42■□□□□ 0.7
SDF4-206ENST00000478938 M0R036 132 aa19.42■□□□□ 0.7
SDF4-206ENST00000478938 BHLHE40O14503 412 aa19.42■□□□□ 0.7
SDF4-206ENST00000478938 ZNF208O43345 1280 aa19.42■□□□□ 0.7
SDF4-206ENST00000478938 CD5P06127 495 aa19.42■□□□□ 0.7
SDF4-206ENST00000478938 HEXBP07686 556 aa19.42■□□□□ 0.7
SDF4-206ENST00000478938 RPS12P25398 132 aaKnown RBP19.42■□□□□ 0.7
SDF4-206ENST00000478938 LPAR6P43657 344 aa19.42■□□□□ 0.7
SDF4-206ENST00000478938 SRSF4Q08170 494 aaKnown RBP19.42■□□□□ 0.7
SDF4-206ENST00000478938 OR8G1Q15617 311 aa19.42■□□□□ 0.7
SDF4-206ENST00000478938 DECR1Q16698 335 aa19.42■□□□□ 0.7
SDF4-206ENST00000478938 GDF7Q7Z4P5 450 aa19.42■□□□□ 0.7
SDF4-206ENST00000478938 TFGQ92734 400 aaPredicted RBP19.42■□□□□ 0.7
SDF4-206ENST00000478938 CYTL1Q9NRR1 136 aa19.42■□□□□ 0.7
SDF4-206ENST00000478938 SLC13A4Q9UKG4 626 aa19.42■□□□□ 0.7
SDF4-206ENST00000478938 TP53TG5Q9Y2B4 290 aa19.42■□□□□ 0.7
SDF4-206ENST00000478938 SLC35A3Q9Y2D2 325 aa19.42■□□□□ 0.7
SDF4-206ENST00000478938 H7BY64 318 aa19.41■□□□□ 0.7
SDF4-206ENST00000478938 MFNGO00587 321 aa19.41■□□□□ 0.7
SDF4-206ENST00000478938 KIAA0355O15063 1070 aa19.41■□□□□ 0.7
SDF4-206ENST00000478938 NPC1O15118 1278 aa19.41■□□□□ 0.7
SDF4-206ENST00000478938 ATP1B2P14415 290 aaPredicted RBP19.41■□□□□ 0.7
SDF4-206ENST00000478938 TEAD1P28347 426 aa19.41■□□□□ 0.7
SDF4-206ENST00000478938 HSD17B7P56937 341 aa19.41■□□□□ 0.7
SDF4-206ENST00000478938 DHCR24Q15392 516 aa19.41■□□□□ 0.7
SDF4-206ENST00000478938 ACTBL2Q562R1 376 aa19.41■□□□□ 0.7
SDF4-206ENST00000478938 MBOAT2Q6ZWT7 520 aa19.41■□□□□ 0.7
SDF4-206ENST00000478938 POM121Q96HA1 1249 aa19.41■□□□□ 0.7
SDF4-206ENST00000478938 KIRREL1Q96J84 757 aa19.41■□□□□ 0.7
SDF4-206ENST00000478938 INSM2Q96T92 566 aaPredicted RBP19.41■□□□□ 0.7
SDF4-206ENST00000478938 C1QTNF2Q9BXJ5 285 aa19.41■□□□□ 0.7
SDF4-206ENST00000478938 ACTRT3Q9BYD9 372 aa19.41■□□□□ 0.7
SDF4-206ENST00000478938 GDE1Q9NZC3 331 aa19.41■□□□□ 0.7
SDF4-206ENST00000478938 KCNE3Q9Y6H6 103 aa19.41■□□□□ 0.7
SDF4-206ENST00000478938 A0A1W2PPE2 198 aa19.41■□□□□ 0.7
SDF4-206ENST00000478938 TSTD3H0UI37 97 aa19.41■□□□□ 0.7
SDF4-206ENST00000478938 ID4P47928 161 aa19.41■□□□□ 0.7
SDF4-206ENST00000478938 TBPL1P62380 186 aa19.41■□□□□ 0.7
SDF4-206ENST00000478938 HTRA3P83110 453 aa19.41■□□□□ 0.7
SDF4-206ENST00000478938 TMEM115Q12893 351 aaPredicted RBP19.41■□□□□ 0.7
SDF4-206ENST00000478938 STEAP1BQ6NZ63 245 aa19.41■□□□□ 0.7
SDF4-206ENST00000478938 SUN3Q8TAQ9 357 aa19.41■□□□□ 0.7
SDF4-206ENST00000478938 EDAQ92838 391 aa19.41■□□□□ 0.7
SDF4-206ENST00000478938 UNKLQ9H9P5 680 aaKnown RBP19.41■□□□□ 0.7
SDF4-206ENST00000478938 LOC100509620A0A075B734 347 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 HLA-AP01891 365 aaKnown RBP19.4■□□□□ 0.7
SDF4-206ENST00000478938 RPN2P04844 631 aa19.4■□□□□ 0.7
SDF4-206ENST00000478938 RBM34P42696 430 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms